Gene CNH00080 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCNH00080 
Symbol 
ID3259103 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCryptococcus neoformans var. neoformans JEC21 
KingdomEukaryota 
Replicon accessionNC_006693 
Strand- 
Start bp1169026 
End bp1169760 
Gene Length735 bp 
Protein Length244 aa 
Translation table 
GC content51% 
IMG OID638258477 
Producthypothetical protein 
Protein accessionXP_572202 
Protein GI58270092 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value0.858802 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGCACC GAAATCTCGA ACACTTGGCC TCTCGCCGTT TCCCTTCTCC TTCATTATCC 
CCATTCGCTT CTTCATCTAT CCCTCCGCGC CAAGTCCGAG ATAGCTCGCC GCCTGTCCCA 
CCTCCATCCG CCCTCAAGTC CGCCATCCCA GCCTACTCGA GCGCCAGTAT ATCAGCAGAA 
ATCCCCATTT CTGAAGAAGA CATCAAGCAT CTTGGGGAAG GATCCAAATC TACTCTTGAT 
CCGGTCGTCC AGGCAGAAGA GTCTGCAGAA ACAATCAAAA GCCGGTTATT CAACGCTCGA 
GAAGAAAAAG CATTGTACGG TTCATCGCTC ATGCCTTTAT CGTCCAATAC TGCCTCGGAG 
GGGGAGGGAG AAGGGGGAGG GGATAAGATG GAAGGGGCAT TACTTGGTGC GAAAGCGTTG 
ATGTTTGCGA CGACGCTAGT GGTAGGCTTT ACAGGTCTTG GAATGTGGGC GGTCGGGAAG 
GCTATGGGGG CGGAAGATGT ACGTTTTTCA TTTCTTTTGC TTTCGCCTGT TACGCCAATT 
GACGTGTTAT ATCTGTCTTT CCAAAATCAG CCTGCCGATT TTGCCGTTAA AATGCGCCAA 
CAACTCGTTC TTTCCATGCC TCAATTAGTC ACGAGCGTCA ACAGACCCGG AAGGAGCACG 
GACGGTTTCG ATAGTGAGGC TATTGAAAAG TGGGTCAATG AGCTGGAAAG GGAAGAGGTG 
GCGAGACCTA GTTAG
 
Protein sequence
MSHRNLEHLA SRRFPSPSLS PFASSSIPPR QVRDSSPPVP PPSALKSAIP AYSSASISAE 
IPISEEDIKH LGEGSKSTLD PVVQAEESAE TIKSRLFNAR EEKALYGSSL MPLSSNTASE 
GEGEGGGDKM EGALLGAKAL MFATTLVVGF TGLGMWAVGK AMGAEDVRFS FLLLSPVTPI 
DVLYLSFQNQ PADFAVKMRQ QLVLSMPQLV TSVNRPGRST DGFDSEAIEK WVNELEREEV 
ARPS