Gene CNH00020 details

Gene Information

• Locus tag: CNH00020
• ID: 3259182
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Cryptococcus neoformans var. neoformans JEC21
• Kingdom: Eukaryota
• Replicon accession: NC_006693
• Strand: +
• Start bp: 1189019
• End bp: 1191246
• Gene Length: 2228 bp
• Protein Length: 519 aa
• GC content: 48%
• IMG OID: 638258483
• Product: glucose transporter, putative
• Protein accession: XP_572196
• Protein GI: 58270080
• TIGRFAM ID: [TIGR00879] MFS transporter, sugar porter (SP) family

Plasmid Coverage information

• Num covering plasmid clones: 18
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTTACCCC CAAAGATCTA CACCTTCCTA TGTGGCTGCT TCGCCGCGTG AGTACCTCTT 
TCAAGATACC TGGAATCTAC TGATTCCTAG CGCAGCATGG GCGCGATGCT CTATGGTTAT 
GATCTGGGTG TCATCTCTTA CGTTCTGGTA GCGCCGGATT TCCTCAAGAC CATGGATACC 
ACAGACGAGA ATTATATCGG CTTCATAACT TCCTCTATGC TGCTCGGTGC CTTCGTCGGT 
AGTATCCCCG CTTCTTTGAT TGCAGATGCT TTCAGCAGAA GAATGGCTAG TAAGTATCTT 
ATGTGTAAAT TAAGAGCGAT ATAGTATTGA CAAGCACTAT CTAGTCACCG TAGCAGGTGT 
GGTCTTCATC ATCGGTGGTA TCTTGCAGAC GGCAGCTCCA AACAAGGAGG CTATGTTTGC 
TGGGCGATTC TTTGCTGGTA TTGGTATCGG CATGCTGGGA CTGTTGACGC CTTGTATGTA 
CCATTTATTT AATATATTCT TACCCATTCT GACACGCTTC TTAGTGTACC AATCCGAGAT 
CGGTACGCCC GAACCAGTCT CATCGTCATC GCACCTCGCT CACTCCCTCT TTAGCTCATC 
CTTCGGCTCG TGGTATGCTT ACAGCAACCT TCCAATTCTT TCTCGGTATC GGCTCTTTCA 
TAGCAGGATG GATCGCGTAT GGTGTTGCGC AGACTCACTT TGAGTCGCCC ATGGCGTGGA 
GGCTTCCGGT GGGCTCTTCT CAAACTGTTC GAGGTTCTGT TGCTAAATAA CTTCCGTAGC 
TTGGATTCCA AATGCTCCCC GCGGTCCCAC TCATCTTCTT GACTTTCCTC TTACCCGAAT 
CTCCTCGGTA CGTACTTCTC ATGTTCTGTT CTACTTGCGG CGATAACTGA TAGCCGCGCA 
TATATAGATG GTTGATCATC AAAGGCCACG ACGAAAAGGC CCTCAGGAGT CTTGCTCGTC 
TGCATGCAAA GGGTGACGAG AGCGATCCAT TCGTGCTGGG GGAGTTTGCC GCTATCAAAA 
ACAAAGTCGA TGCCGAAGCC GTTATGCAAC AGTCTTGGAG ACTTGTAAGT CATTCTCGGC 
TATGTGGCGC GTAAAGGATA AGGGTGACAC CCGGTGGTAG ATCTTCAACT TTGAAGACCG 
GACAAACATG AGAAAGGTGC TGTATGGTAT TATCCTACAA TTCTCCGTTC AAATGACTGG 
TGTGTCGGCT ATCCAATACT ATGCCCCGTA TGTCCACTAT TTTCTGTATC GTATCTTCAT 
ATACTAACCA CCCCTTAGCA CGGTGTACGC CTCAGTCGGG TTCTCAACCA ATACTTCTCT 
CTTGATTAAT TCCATCAACT CTGTCAACGC TCTCATCGCC CAGTTCTGCT GTATTCTCTT 
TGTTGACAAG ATTGGGCGTC GATTCCCTTT GATCTTTGGA AATATCTTAT CAGGAACCTG 
TTTCGCTGTC GCTACGTATG CCACATTCTT CCACTGCATC ATTAACTCTC TCTGATACCA 
TTTCCAGTGC ATTGGCAAAG CAGTTCGCGG ATGGACGTGG CAGCAGAGGC CAAGGTATCG 
GTTTCGTCGT CGTGCTCTAC GTATACAACT TCTTCTTTTC TGCCTGTATC GGTCCTCTCT 
CTTGGATCTA GTGAGTCCTC TCACTCTTCA TATGAGGAAA GGTATGTTAA CCAACGAGAT 
AGCCCGGTTG AAATCATGAA CACTGCTATT CGAGCCAAAG CGACGGCAAT GGTAAACATG 
GCTGCTTGGA TCTCGAACTT TATGATTGGT CAAGTCTCTC CCAAGGCTTT CGCCAACATC 
GGTGAGTATT CTGCCTCTGT ATTGTATACA AATAAGCAAG CGTGACTCAA CTGTCTCTAT 
AGGCTGGAGA TATTACCTGG TTTTCTGCAT CTGTTCCTTT ACCAACGCCA TCACCTTCTA 
CCTTTTCTTC CCTGAAACCC GAGGCCGAAC GCTGGAGGAA ATGGACAACT ACTTTAGGCA 
GATGAACCTC ATCGTGCCGT TGACGAAGGA TGTACAGAAG ATCTCGGCGC ATGAGCGAGA 
GGCGCAGCTT GTGGAGCAAG GTACGTTTCT TCTCCCCTTT TTGGGCGGCT CGTTTGTAGC 
TAATCATTTT TGCCATGATA GGTGTCATTC AACAAGAGGT GGGCATGCAA CAAGAGGTGG 
ACGAGAAGGA TGAGAAGAAT GAAAAAAAGG ATGAGAAGAA GGAGATTGAG CATCAGGAGG 
TGGTATAG 

 

Protein sequence

MLPPKIYTFL CGCFAAMGAM LYGYDLGVIS YVLVAPDFLK TMDTTDENYI GFITSSMLLG 
AFVGSIPASL IADAFSRRMA ITVAGVVFII GGILQTAAPN KEAMFAGRFF AGIGIGMLGL 
LTPSHPSARG MLTATFQFFL GIGSFIAGWI AYGVAQTHFE SPMAWRLPLG FQMLPAVPLI 
FLTFLLPESP RWLIIKGHDE KALRSLARLH AKGDESDPFV LGEFAAIKNK VDAEAVMQQS 
WRLIFNFEDR TNMRKVLYGI ILQFSVQMTG VSAIQYYAPT VYASVGFSTN TSLLINSINS 
VNALIAQFCC ILFVDKIGRR FPLIFGNILS GTCFAVATAL AKQFADGRGS RGQGIGFVVV 
LYVYNFFFSA CIGPLSWIYP VEIMNTAIRA KATAMVNMAA WISNFMIGQV SPKAFANIGW 
RYYLVFCICS FTNAITFYLF FPETRGRTLE EMDNYFRQMN LIVPLTKDVQ KISAHEREAQ 
LVEQGVIQQE VGMQQEVDEK DEKNEKKDEK KEIEHQEVV