| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CNG03640 |
|---|
| Symbol | |
|---|
| ID | 3258636 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_006692 |
|---|
| Strand | - |
|---|
| Start bp | 1020653 |
|---|
| End bp | 1022226 |
|---|
| Gene Length | 1574 bp |
|---|
| Protein Length | 452 aa |
|---|
| Translation table | |
|---|
| GC content | 48% |
|---|
| IMG OID | 638257988 |
|---|
| Product | DNA-(apurinic or apyrimidinic site) lyase, putative |
|---|
| Protein accession | XP_572070 |
|---|
| Protein GI | 58269828 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0177] Predicted EndoIII-related endonuclease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 0.433978 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TCAAACATCA GAATAATGTC GAGAAGGCCA AATCTCCGCT CAACAAAGTT AGCACTCAAC
CAGAAGGTCT CTATTATCCC AACAGATGCG GTCAAGGCAG AGCCGCCAAG CTCCAAGCTT
ACGTATAGTT CCCTCCGTCG ACCGACCAGA TCGAGTGCTA CAGTGGAAGA ATTGGCATCG
CCCGTCAAGA AGAACAAATT AAACATCGCC AAGTACGAAT ACAAGGGCTC GATACCTTCC
CCTAGGAAGC GTCCGAGGAT AGATGATGTT GTCAAGGAGG AAGAAATTGA AACAAAGGCA
AGCCCAATAA AGTCTCCGGC AAAAAAACCA TTGCCACAGG TAGCGCTTGC AAAACCTCAT
GCGGCCCCTG CAAAATGGGA AGAACAGTAC CGATTGATTG AAAAGATGAG ACGGGGTATT
GTCGCTCCTG TTGATGATAT GTAAGCGATT CGTGACCTCT CGTGCCGAAC GCATATACTG
ATAGCTTTGT TTAGGGGCTG CGAACGGCCG AGAACCAATA CCGAAGGAGA TCCAAAGGTA
TTTATTTTCA GTTAAAGCCT CATGTCGGTG CTAATCCGAG CATAAGACTT TTCGTTTCCA
CATCCTCATA TCTCTCATGC TCTCCTCTCA AACAAAAGAT GCTGTGACCT CAGCAGCCGT
CACCTCTCTT CACACCTCTC TGCCAGGTGG TCTTTCTGCC GCCTCTCTGG CCGCTGCACC
CTTGGAAACC ATCCAGGAAT GTATCAACAA GGTTGGATTC TGGCGACGAA AGGCAGAATA
CATCCAAGAG GCTGCAAAGA CACTTTTGGA ACAAGAAGGA GATGAGAAAG GAGACGTGCC
AAAGACGGTC GAAGGTTTGT GCAAGTTGAA GGGCGTAGGG CCTAAAATGG CTTTCTTGGC
CCTGCAATGC GCTTGGGATA TGTATGTAAT CTTTCGTTAT CCTTCATCTA TACCTCTCAA
CTGACATAAA ATAAAAAGTA ATGCTGGAAT CGGAGTTGAC GTCCACGTTC ATCGCATCAC
AAATCGCCTC AAATGGCACC GTCCACCTAC ATCCACCCCA GAACAAACCC GACTCAACCT
TCAATCATGG CTTCCCCCCC ATTTACATAA ACCTATCAAC CCCTTGATGG TCGGTTTTGG
TCAAGTGATC TGCCTCCCAG TTGGGCCTAG GTGCGATATC TGTCTGTTAG GCCAAAAGGA
GATATGCCCA AGTCGAGTAA AAGGGGCGAA TGCCAAGGGC AGAAAAGAGG TGACGTATAG
CTTCAAGGAA GAGGAGGATG AACTTGCTAT CGGGCAGTGG CGGTGGGGTC AAGCGAAGGG
AGTTAAGAGT GAGGCCAAGG TTGAGATTGG ATATGAGGGA GGATTAGAGA AAATCAAAGA
TGAGGAACCA GAGAATTCGG TCGAGGTGGA GCAGATGATC AAGGAACCAG GGATGAGACG
ACCTGATGAA GTGTTAGAGG TCTTGGATCA GGTAGATGGC CCCACGGATA TCGGGGCAGA
GCCTGTCATA AAGACCGAAA ATGTCGATTG GTAATCATTG GGTATCATAA TCAGTCTTTG
CATCATTCGT CGGT
|
|---|
| Protein sequence | MSRRPNLRST KLALNQKVSI IPTDAVKAEP PSSKLTYSSL RRPTRSSATV EELASPVKKN
KLNIAKYEYK GSIPSPRKRP RIDDVVKEEE IETKASPIKS PAKKPLPQVA LAKPHAAPAK
WEEQYRLIEK MRRGIVAPVD DMGCERPRTN TEGDPKTFRF HILISLMLSS QTKDAVTSAA
VTSLHTSLPG GLSAASLAAA PLETIQECIN KVGFWRRKAE YIQEAAKTLL EQEGDEKGDV
PKTVEGLCKL KGVGPKMAFL ALQCAWDINA GIGVDVHVHR ITNRLKWHRP PTSTPEQTRL
NLQSWLPPHL HKPINPLMVG FGQVICLPVG PRCDICLLGQ KEICPSRVKG ANAKGRKEVT
YSFKEEEDEL AIGQWRWGQA KGVKSEAKVE IGYEGGLEKI KDEEPENSVE VEQMIKEPGM
RRPDEVLEVL DQVDGPTDIG AEPVIKTENV DW
|
|---|
| |