| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CNG03480 |
|---|
| Symbol | |
|---|
| ID | 3258643 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_006692 |
|---|
| Strand | + |
|---|
| Start bp | 975007 |
|---|
| End bp | 976578 |
|---|
| Gene Length | 1572 bp |
|---|
| Protein Length | 280 aa |
|---|
| Translation table | |
|---|
| GC content | 51% |
|---|
| IMG OID | 638257972 |
|---|
| Product | succinate dehydrogenase iron-sulfur subunit, putative |
|---|
| Protein accession | XP_572035 |
|---|
| Protein GI | 58269758 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0479] Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit |
|---|
| TIGRFAM ID | [TIGR00384] succinate dehydrogenase and fumarate reductase iron-sulfur protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.315726 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TCGCACAACT CACCACTCAT ACATACCTCC AGCGACATCG AGCATACATT ATGGTCCGCC
CAGCCACCGT CCTCCGTTCT CTGAACGCTA TCCCTTCCAC CTCCAGACCG CTCGCCGCTG
CCGCCAGGTC TTTCCACGCT ACCGCTTCTG CCCAGCTCGC CACTCCTGTT GAGGGAAAGC
AGCCTCCAAT TAAGGAGTTC AAGATCTACC GATGGGTGAG TGGAGAGATT TAAAGATTGT
GGGAAAGCCG GAGGGGACGG CATGTTGAGC GAGAAGACGA AGATAAAAGG AATCAAGTGG
CTGACGGCGT GGACAGAACC CCGATGTCCC CAATGAGAAG CCCAAGCTCC AAACATACAA
GATCGATCTC TCCCAATGCG GCCCTATGAT GCTCGATGCT TTGGTACGTA CATCCGTCTT
TGACGCGAAA CTCGCAGGTT GAGCCGGTAA GCGAGCTGGG GCTGACTGTT TTTTCGCGTC
TGTAGATCAA GATCAAGAAT GAGCTCGACC CCACTCTTAC TTTCCGACGA TCTTGCCGAG
AGGGTATCTG TGGTTCCTGT GCCATGAACA TTGACGGTGT CAACACTCTT GCTTGCTTGT
GCCGAATTCC AAAAGACACC TCCAAGGATT CCAAGATTTA CCCCCTTCCT CACAGTGCGT
TGAGCTATTT TCATTTGGAT GCCTGCAGTC GATGCTGACT CATCTATAGT GTACGTGGTC
AAGGACCTCG TCCCCGACCT TACACACTTC TAGTGAGTCT TAACGGATTG AATACATCAC
GTGACTAGTT GCTGATGATC CCCGCAGCAA GCAATATAAG GCTATCGAAC CTTACCTCAA
GAACGACAAC CCCCCAGAAA AGGGAGAGTT CCTTCAAAGT CAGGCGGACA GGAAGAAGTT
GGACGGAATG TACGAGTGTA TTTTGTGTGC TTGTTGCTCA GCCTCTTGCC CTTCAGTAAG
TTTTACCGGA TTTGCCGCTG CGGGGAATTA GCGCTGACTT TTCTTTGTAG TACTGGTGGA
ATCAAGGTAC GCTTTATGCA ATGCAAATTG CTCCCTACGG ACTCTTGACT GACTTTTTAT
GTAGACGAAT ACCTTGGTCC CGCAGTGTTA ATGCAGGCTT ACCGATGGAT GGCTGACTCT
CGAGTAAGTG GTGCCCCCTG GGAACCCAGA TGGGACTCCT CACCGGTCGA GTTTCCGGTC
GCTAACATAG CCGCACCAAT AGGATTCTTA CGGCGCCGAG CGAAAGGAGA AGATGCAGAA
CGCCATGTCT CTTTACCGAT GCCACACCAT CTTCAACGTA AGCGTATTGG CATCCTGCAT
TAGATATCAT GCTAACGATT GCATAGTGCT CTCGAACATG TCCCAAGGGT CTTAACCCTG
CCGCCGCGAT TGCCAAGATG AAGCTCGAGA TGGCTACCGG AGAGTAAATA TAGCAGCTGT
AGCAAAAGAA ACGGGTTCTG GGGATTGTGA TGTACTGGCT AGTGCATCGA GTTACGCAGT
GGACGAGATA CGATACTACG TCTGTCTGGG TTGTTTGTAT CTTTATGCAC CATGCATTTT
CTCATTCAAC AA
|
|---|
| Protein sequence | MVRPATVLRS LNAIPSTSRP LAAAARSFHA TASAQLATPV EGKQPPIKEF KIYRWNPDVP
NEKPKLQTYK IDLSQCGPMM LDALIKIKNE LDPTLTFRRS CREGICGSCA MNIDGVNTLA
CLCRIPKDTS KDSKIYPLPH MYVVKDLVPD LTHFYKQYKA IEPYLKNDNP PEKGEFLQSQ
ADRKKLDGMY ECILCACCSA SCPSYWWNQD EYLGPAVLMQ AYRWMADSRD SYGAERKEKM
QNAMSLYRCH TIFNCSRTCP KGLNPAAAIA KMKLEMATGE
|
|---|
| |