| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CNG01530 |
|---|
| Symbol | |
|---|
| ID | 3258842 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_006692 |
|---|
| Strand | + |
|---|
| Start bp | 439223 |
|---|
| End bp | 441240 |
|---|
| Gene Length | 2018 bp |
|---|
| Protein Length | 359 aa |
|---|
| Translation table | |
|---|
| GC content | 48% |
|---|
| IMG OID | 638257770 |
|---|
| Product | endo alpha-1,4 polygalactosaminidase precusor, putative |
|---|
| Protein accession | XP_571855 |
|---|
| Protein GI | 58269398 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3868] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GGTCCCTGCA AATGGCCGCC CAAAACACCT TTCGTTTCAC CATCCCTATT TCAATCCCAT
GTATCATTTC GGCACGTTCT CGAAAGCAAT GATTTGACTG CCCCTTTGAC ACTCGCCCAT
ATACACAATC AAGGCCCCTC TCGGTGTACA GGTGGAGGGC CCTTCGGGAG TCCGATAGAG
CAATCCATAT TCGTTTCACG ATGTTGTGAA TCTCGACGCG TTGACAGGCT CAAATACAAA
GGCAGTCCTT CACTTGAAAG CAACCAAGGT AATCAATTCA AGGTATATAA CTGCCACCAT
GTATCTCTCC AACATCCACC CAAGCTCTCA AGGTCAGTAT CTTTCCCAAC ACACGTTCTT
TACAAGTCGC CGTTCTTTCT TCACCAACCA CTATACAACA TCTCCATTCA CAAACAGACA
TGATCTCAAT TTCTCCTTCA AGCTGGCTTC TTGTCATCTC CTCCCTGGTG GCAGTGACTG
TGAGCGCCAT TAGAATGTAC TATTGATATG TAGCTGATAT ATATTACACC ACATCAGTCC
GCCAAGCCAT TTCCCCGAAA CGTTCCTCAT GGTCATTGCG GCTCCTTCAC ATCTTCCCTT
ACCATCGTTG AGACGTCCAA AGATGCTACG AGCGCCGAAG AAACTGTTGT AACCTCTTTG
GCCATTGAAG CTGCCTTGGC TTCTGCCACA AGCTCTAGCA GTAAGCACAG AGCAATTCGT
CGAATTCCAT TACCATTAAC TCACATTCCA TTTCAGGTGC TTCTGCTGCT ACTACTAGCT
CGATCTCTAG TGTCGCCTCC TCTGTCAGCC TCAGTTCCAC CTTTGTTTAC GAGCTTGATG
CTCAGTCGGT GACCTCACCT GAGATCACCA CCGACACTGG CCTTATTGTC AATGCGGATG
TGTATATCGT AGACGGTGAG GGTACTAGCG AAGACACTAT GTACGTCTTC GGAAGATCAT
AACCTAGCTT GATTACTTGC TGAACACTTT ATAGTGCCCA GTACCACGCA GACGGCAAGA
GCGTTATCTG TTACTTCTCT GCCGGTACCT GGGAGCCTGG CAGGTAAATT ATCATCTGCC
CTACTTTGTG AGCCTGGTAT TGAGGGATCG TATTGACTCT TTCGTACAGG TCTGACGCCG
ATGACTTTGA CCCTGCCTGT GTTTGCGGCA CTGGAGGCTC CTTTGCAGAC AATGCTTGTT
CATCTGATGA CAATAAACTC TCTGACTGGG ACGAGTGGTG GCTTGACATC CACAGTGCCT
CGTGTATTTC CAAAGTCGAG AGCATCATGT CTGCACGTAT CTCGTCATTT GTGGCCAAGG
GCTGTGACGG AGTAGACCCT GACAACGTTG ACAGTGTAAG TAGCATAGAA GCCCGCCCCA
GGCCTCCTCA TGATAACTTT ACGCTGATTA TCTCTACTGT TTTGTCACAG TTTGCCAACT
CGGACCAGCT CCACGGTAAC ACTGCCGACG ATCAGGTCAA CTACCTCCTC TGGCTGTCCT
CCATTGCTCG TGGCCAAGGT CTCATGATCG ATCTCAAGAA CGCCGGCTCG CTTCTGGTGG
ACGATAACGG TGATGCTACC TCTTACCAGT CTGAGATCGT TGAGGCCTTT GATTTTGTGG
TCATTGAGTC CTGTGTAAGT TGATTGTGCT TCTATTTCTC CTTATCAAAG CTCGACAACA
CAGCCCATTT TGCTGACTTC AATTGTTACT CTTCCTTGTA GCATGAGTAT GAAGAGTGTG
ATATTTACGA CTCCTTCCTG GCTGCCGGCA AGCCCGAGAT CCAGATCGAA TACGGAGACA
TTACCACCTG TCCGTCCCTG CAAGACGGCC AACACCTCTT AGTTTACAGC CAAAACGATC
TCAGCTCAGC GTTGATCACT CTTGAATGTG ACTGATCAAA GTCGATCCAT ATTTTGAACC
CTCAAATGTA TAAAATTATT CAAGAAGTGA AAGCACAAGA AAGGAGCGTT CAAGAAAAAG
ATGATCAGCA GACAACTAGC TGATTGATTG TTTCCGTT
|
|---|
| Protein sequence | MISISPSSWL LVISSLVAVT SAKPFPRNVP HGHCGSFTSS LTIVETSKDA TSAEETVVTS
LAIEAALASA TSSSSASAAT TSSISSVASS VSLSSTFVYE LDAQSVTSPE ITTDTGLIVN
ADVYIVDGEG TSEDTIAQYH ADGKSVICYF SAGTWEPGRS DADDFDPACV CGTGGSFADN
ACSSDDNKLS DWDEWWLDIH SASCISKVES IMSARISSFV AKGCDGVDPD NVDSFANSDQ
LHGNTADDQV NYLLWLSSIA RGQGLMIDLK NAGSLLVDDN GDATSYQSEI VEAFDFVVIE
SCHEYEECDI YDSFLAAGKP EIQIEYGDIT TCPSLQDGQH LLVYSQNDLS SALITLECD
|
|---|
| |