| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CNG01150 |
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| Symbol | |
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| ID | 3258775 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_006692 |
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| Strand | + |
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| Start bp | 323221 |
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| End bp | 326156 |
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| Gene Length | 2936 bp |
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| Protein Length | 748 aa |
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| Translation table | |
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| GC content | 51% |
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| IMG OID | 638257732 |
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| Product | spermidine synthase, putative |
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| Protein accession | XP_571786 |
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| Protein GI | 58269260 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0421] Spermidine synthase
[COG1748] Saccharopine dehydrogenase and related proteins |
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| TIGRFAM ID | [TIGR00417] spermidine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | CACGAGCTAG ACTTGTTGTT GGTTTCTCTT CTTGACCTTT TTCTCTTTTC CCAAGCAAAA
AACAATTCAT CATGGCTGTC TCTCAATCTC ATCCCAACAT CGTCGGTACG CAATCTGCGA
AATGCTTCTT ATAAGGGACT TGGAAAAGTT GGAACTAATA TGAATATTGC AGACGGCTGG
TTCAGGGAGA TCAACACCCA ATGGCCTGGT GAGTCGATGT CGATCCTTTC ATGAAGAGCT
TTTACTGACA GCCAACGATA GGTCAGGCTA TGACCCTCAA GTGAGCCTGG ATGTTATGGA
GGGAATTGCG AGTGTACTAA TGCGTCTGCA GGGTCAAACA AGTCTTGCAC CAGGAGAAGT
CCCTCTTCCA GGTGAGTCAT ATGTTGCAAT GTGAGGAGAA AACGCTGACG TTTGCCTTCC
AGGATGTCCT TGTCTTCGAA TCCGAGACCT ACGGTAATGT GCTTGTCCTC GACGGTGTCA
TTCAGGCCAC CGAGCGTGAT GAGTTCTCGT GAGTGACGTT TCTACCCTAA TGCAGAGATA
AGAATTGTTG ACATCGACCA GTTACCAGGA GATGATCACT CATCTTCCCA TGGCTTCACA
CCCTAACCCC GAAAATGTTC TTGTTATCGG CGGTGGTGAC GGTGGTGTCA TTCGAGAAGT
TCTCAAGCAC AAGTCTGTCA AGAAGGTCAC TCTCTGTGAC ATTGACGAGG TGGGTTTTGC
TCATACTCAA TGTCGCACGT TGTCTAACTC ACCGTTTGCC AGGCTGTCAT CCGAGTCTCT
AAGCAATGGC TCCCTCTCAT GTCCGACTGC TACAAGGACC CTCGAGTTGA GGTTCACATT
GGTGACGGTT TCAAGTTCCT TCCCGAGCAC AAGAACGAAT ACGACGTTAT TATCACCGAC
TCCTCTGACC CTGTCGGTCC CGCCGAGGCG CTTTTCCAGC CTCCTTACTT CCAACTCCTC
AAGGAAGCTC TTAAGGAGGG TGGTTCCGTC TCTACCCAGG CTGAGTGCTT GTGGATTCAC
CTTCCCCTCA TCAAGACCCT CAAGGAAACT TGCTCCAAGC TCTTCCCTGT CGTCAAGTAC
GGCTTCACCA CCATCCCCAC CTACCCCGCT GGTCAGATTG GTATCATGGT CTGCACCAAG
GACTCTACCC GAGACCTGAC CGTCCCCCTT CGTGCCGTTC CCGACACCAG GTACTACAAC
TCTGAGGTCC ACCGAGCTGC TTTTACCATC CCCGAGTTCG GTCGTGCCAT GCTCGAGGAC
GGCGTCAACG TCTTGCCCAA GTTCAGCGGT GCTCGACCCA CTACGACCAA GAAGAAGGTG
CTCCTCCTTG GTTCCGGTCT CGTTGCTGGC CCTGCTGCCA ACTACATTGC GCGACACAAC
CACGAGCTCA CCATCGCTTG CCGAACTCTC GCTAGTGCAG AGGAGCTCGC TTCCGGCCTC
CCCAACGCCA CCCCCATGTC TGTTGATGTC TCTTCTGCTG ACGCTCTCCG ACAGGCTATC
AAGGGTCACG ACGTTGTTGT CAGCTTGATC CCTTACACCC ACCACGCCCA GGTCATGGAG
GCTGCTCTTG AGGAGAAGGT CCACGTCGTC ACTACCTCCT ACGTCAACCC CCAGATGCGT
GCCCTCGAGC AGAAGTTCAA GGATGCTGGT CTGATTTGTT TCAACGAGAT CGGTGTCGAC
CCCGGAGTTG ACCACTTGTG GGCTGTCAAG GTCTTTGACG AAGTCAAGAA GGCTGGTGGT
AAGATCAAAA GCTTCTACAG CTTCTGTGGT GGTCTTGTTG AACCTGCTGT ACGTATCTTT
TTTGCAATGA TTACTGCATC TACTAATAAT GATATAGGCC GCCGACAATG CCCTCGGGTA
CAAGTTCTCT TGGTCCCCTG TCGGTGTCCT CATGGCCCTC AACAACGACG GCAAGTACCT
CAAGGACGGC AAGGTCGTTG AGGTTGCCGG CAAGGACCTC ATGAGCACAG CCAAGCCTTA
TTATTTCACT CCCGCGTACA ACCTCGTCGC CTATCCCAAC CGAGACTCTA CCGTCTTCAG
GGAGTTCTAC GGTCTGGAAG GTGTTCAAAA CCTTTGCCGA GGTACTATGA GGTACGCTGG
CTTCTGCGAA GTCATCACCG CCTGGAAGGA AATTGGTTTG ATGTCCGATG CTCAAGTCGA
CTACCTCGCC CAGGGTGCTG CTCCCATCAC TTGGATCAAG GTCATCTCTC AGTTGCTCGG
CGTTGAGGCC AAGGAGGCGT AAGTTTACCA TATTGCATCT GGAAATATGC TGACCAGTAA
ATAGTGCCAT TATTGAGAAG CTCAAGACTC TCAAGTCTTT CGAGACCGAG TCTAGAGTCC
TCATCTCCAA ATTCCGAGAC CTCGGTCTCT TCTCCGAGGA GCAGGTCGCT CAGCGAGGTT
CCGTTATGCG AGCTCTGTCC GCTCTTCTCG AGGAGAAGTG TGCCTTCAAG GAAGGTGAGG
TCGACCTTGT CTTGTTGCAA CACACTTTCG AGATCATCAA CGCCGACGGT TCCGAGGTGC
GTTCTCTCCG GATTAGATCG TGAAAGGAAA AAAAATGCTG ATGGGAATAT GCTAGCAAAC
CATCACTTCC TCCCTTGAGG CTTACGGTGA CAGGAACGGT GGACCCTCTG CCATGGCCAA
ACTCGTCGGT GTACGTGTCA CTTCTTAATG ACTTGATTTA CCTCGTGTGT ATGTTTTCGC
GGCGGTATGC TGACCAAAGA TGTTTGTTAG GTTCCTTGCG GTATGGCTGT GCAGTTCATC
CTTGAGGGTG TCCTCAACAA GCCCGGTGTC TTCGCTCCCT ACGACGAGGA GACCTGCAAG
TTATTCCGAG AACGACTTGA GAAGGAGGAG GGCATCACCA TGGTTGAGAA ACTTGTTTAA
ACAGTTGTTT ATAGAGGTTT GATATTGAGT GGTTATGATT GATTATGGTG TTTATT
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| Protein sequence | MAVSQSHPNI VDGWFREINT QWPGQAMTLK VKQVLHQEKS LFQDVLVFES ETYGNVLVLD
GVIQATERDE FSYQEMITHL PMASHPNPEN VLVIGGGDGG VIREVLKHKS VKKVTLCDID
EAVIRVSKQW LPLMSDCYKD PRVEVHIGDG FKFLPEHKNE YDVIITDSSD PVGPAEALFQ
PPYFQLLKEA LKEGGSVSTQ AECLWIHLPL IKTLKETCSK LFPVVKYGFT TIPTYPAGQI
GIMVCTKDST RDLTVPLRAV PDTRYYNSEV HRAAFTIPEF GRAMLEDGVN VLPKFSGARP
TTTKKKVLLL GSGLVAGPAA NYIARHNHEL TIACRTLASA EELASGLPNA TPMSVDVSSA
DALRQAIKGH DVVVSLIPYT HHAQVMEAAL EEKVHVVTTS YVNPQMRALE QKFKDAGLIC
FNEIGVDPGV DHLWAVKVFD EVKKAGGKIK SFYSFCGGLV EPAAADNALG YKFSWSPVGV
LMALNNDGKY LKDGKVVEVA GKDLMSTAKP YYFTPAYNLV AYPNRDSTVF REFYGLEGVQ
NLCRGTMRYA GFCEVITAWK EIGLMSDAQV DYLAQGAAPI TWIKVISQLL GVEAKEAAII
EKLKTLKSFE TESRVLISKF RDLGLFSEEQ VAQRGSVMRA LSALLEEKCA FKEGEVDLVL
LQHTFEIINA DGSEQTITSS LEAYGDRNGG PSAMAKLVGV PCGMAVQFIL EGVLNKPGVF
APYDEETCKL FRERLEKEEG ITMVEKLV
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