| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CNG00380 |
|---|
| Symbol | |
|---|
| ID | 3258678 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_006692 |
|---|
| Strand | - |
|---|
| Start bp | 93753 |
|---|
| End bp | 98181 |
|---|
| Gene Length | 4429 bp |
|---|
| Protein Length | 1087 aa |
|---|
| Translation table | |
|---|
| GC content | 48% |
|---|
| IMG OID | 638257652 |
|---|
| Product | hydrogen-exporting ATPase, putative |
|---|
| Protein accession | XP_571736 |
|---|
| Protein GI | 58269160 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0474] Cation transport ATPase |
|---|
| TIGRFAM ID | [TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC
[TIGR01647] plasma-membrane proton-efflux P-type ATPase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATGGGGT TGAAGAACCG CAAGAACCAC AAGAAGGACC CAGAGGCTGG TGATGCTGAA
ACAGAGGCTA AGCGTCAGGA GGAGGACAAA AAGAAGAGTA TGTACTTGCA CGATGGCACG
TATATAAAAT TCATGACTAA CCTCGATTAT TACAGAGTAC TCCGGTGAGG AGTATGATGT
GCTCTTGAAG TACGTTGCAG ACCAGCAAGA AAAAATCAAG AAAGGGGGGG ATGATGAAGG
GAAGGAAGAC GAAGAGAACG TCAAGTATAT CAGGAAGTGG TATACCCCCT GGAAGAAGAC
GAAGGTGGAG ACTGGAGGCA AGAAGGTGAG TTCGCAGCAT TCTGCCACGG TACCCCTTGC
TAAAATTTGA GTTATAGGTG CCGCCAGACT GGCTCAATAC CGACCGACAA AAGGGTCTTT
CCTCTTCGGA GATTGAAGAA CGTAGGAAGC ATTCTGGCTG GAACGAGCTT GAATCGTAAG
TCATTCATTT GAGTGGGCCT CATATCCTTT TGGCCATAAT AGATGGGGAC TGACCTGAAC
TCAGCCCAAA CGAAAACCAG TTCCTCAAAT TCATCTCCTA CTTCCGAGGG CCCATCCTTT
ATGTTATGGA ACTCGCTGTT ATTTTGTCTG CAGGTCTTCG AGATTGGATT GATTTCGGAG
TCATCATAGG TTTGTAATTC TCTCTTGTGT ACCAACCTGC ATAACTTTAC TGATACTAGT
GTCATCCTAG GTATTCTGTA AGTTCTTCGT CCATTGTCCC ATTTCTGGAT GGTGAATTTA
TATGCCGGGA GGACGTCAAA AGAAAAAGCC GAAAAAAAAG GTCATAAGGA ATGGTGAAAT
GACGTTACCT TGGGCGGCAT TGGCCGCGTC TCCGTCTCAT GGGCGCCTTG AATGAAGCCA
ATGCGGCCTT TATCGCTTTG CATAATGTTC GAAGCGATGT GGTAATTATT TTCCGCTCCG
TATATTTTGA TGTTCCGACG TTTTTCTGCT TGAAAGTCTC AGTGCTTGGT CTAGAATGCC
ACTGAACAAT TACTAACAAG TTCCCAGGTT CCTAAATGCT GGTGTTGGTT GGTATCAGGA
GAAGTAAGCC ACTCTATCTT TCTATCCGTG ATAAGAAAGC AACTAATGTG TCCTGTCAGA
CAAGCCGGAG ACATCGTAGC TCAACTCAAG GCTGGAATCG CCCTCAAAAC GGTTGCTATT
CGAGACGGGA AAGAGGAAGA AATTGAGGCT CGAGAGCTTG TTCCCGGTGA CATCTTAGTT
CTCGAAGAAG GCAAGACCAT CGCCGCTGAT GCAAAGGTAA GCCGAGGTGG TACAGTGGCA
GAATGACAGA TTGACTTATG ATGTGCCAGA TTATTGGTGA CTATGAAGAC AAAGATGGTT
CCAAGGTACA TCTTTGCCAT TTTGTGTAGT ATGGATTTTT TGCTAACTTC GAAACAGTCG
AAGGACATCC TTGATCGCGT AGAAAAGTCG AAGCATTCTA AGAAAGGTGA TGACGACGAT
GAGGATGATG GACCGGACAA GGGCCCATCC CTCTGTTCCG TTGATCAGTC TGCTATCACT
GGAGAGTCTC TTGCTGTGGA CAAGTTTATC GGTGATGTCG CTTACTACAC GTGTGGTGTG
AAGCGTGGCA AGTGCTTTGG AGTCGTCACT GTCAGTGCCA AGGGAAGCTT TGTCGGTAGG
ACTGCCTCAC TTGTGTCCAG TGAGTCACTT TCCCTGTGGT TGTTCAGTCA TCACTGACGG
ACAATTCCAG GTTCCAATGA AAAAGGTCAT TTCCAGATTG TCCTCGGTGG CATTGGTACA
ACGTGAGTTT CTTAAATCCA AGAAACTTGG CAGCAATGGG GCTAATAGAC CCATAGGCTT
TTAGTTATGG TCGTTGCCTT CATCTTCGCT GTTTGGATTG GTGGCTTCTT CCGAGGAACT
GGTATCGCTA CCCCTAGAGA GAACAATCTT CTCGTTTATG CCCTTATTTT CTTTATCATT
GGTGTGCCTG TCGGTCTTCC TGTCGTCACG ACTACTACTC TTGCCGTCGG TGCTGCCTAC
CTCGCCAAAC GAAAGGCTAT CGTCCAGAAG CTTACCGCCA TCGAGTCTCT GGCTGGTGTC
GACATACTTT GTTCCGACAA AACGGGCACT CTTACTGCCA ACAAGCTTTC CTTAAACGAA
CCATACATCG CGCCCGATGT CGACCCCAAT TGGTTCATGG CTGTCGCTGT TCTCGCTTCT
TCTCACAACG TTCTCGGTCT TGACCCTATT GACAAGGTCA CCATCGTCGG CTTGAAGGAC
TACCCCAAGG CTCAAGAGAT GCTCAAGGGC GGATGGAAGA CCCACAAATT CACTCCTTTC
GACCCTGTTT CCAAGCGAAT CACTGCCGAG GTTGAGAAGG AGGGCAAGCA CTACACTTGC
GCCAAGGGTG CTCCCAACGC CATCTTGAAA CTCACCAAGT TCGATCCTGA CACTGTGTCC
GCCTACCGAG CCCAATCTCA ACAATTTGCG TCTCGTGGTT TCCGAAGTTT GGGTGTCGCG
GTCAAGGAAG ACGGCAAAGA CTGGGAATTG CTCGGTATGC TTTGTATGTT CGACCCCCCT
CGTATCGACA CTGCCAAGGT AAAGCGCTCT TTGTGATATG TATGTGTCTT ACCAGTGAAG
CTAACAATTT GCTGCAGACG ATCGGAGAAG CTCATGACCT AGGTATCCAA GTCAAGATGC
TTACTGGTGA CGCCGTGGCT ATCGCCAAGG AAACTTGTAA ACAGCTCGGC CTCAAAACCA
ACGTTTATGA CTCTGAGAAA CTCATTGGTG GTGGTATGGC TGGTTCTGAC ATCCGAGACT
TTGTTGAAGC GGCGGACGGT TTTGCCGAAG TCTTCCCCGA ACACAAGTAC CAGGTCGTTA
ACCTTTTGCA GGAACGTGGC CACTTGACTG CTATGACTGG TGATGGTGTC AATGACGCTC
CTAGTTTGAA AAAGGCCGAC TGTGGTATTG CTGTCGAAGG TGCCAGTGAT GCCGCTAGGA
CTGCTGCCGA TGTTGTCTTC CTCGACGAAG GTCTTTCTAC TATCATCACT GCCATTAAGG
TCGCTCGGCA GATTTTCCAC CGAATGAAGG CGTATATCAT CTATCGGTGG GTGGTCCGCC
GTCGAAAACT GTCAAAACTA ATGAATACCT TATAGTATTG CTCTTTGTGT CCACCTTGAA
GTGTATTTGA TGCTTTCCAT CCTTATTCTC AATGAGACTA TCCGTGTCGA CCTCGTTGTC
TTCCTTGCCA TCTTTGCCGA TGTCGCTACC ATCGCCATTG CCTACGACCG AGCTCCTTAC
GCTCATCAGC CTGTTGAATG GCAGTTGCCC AAGGTCTGGA TCATCTCTAC CATTATGGGT
CTTCTTCTCG CAGCGGGTAC CTGGATCATT CGAGCTACTC TATGGATTGA CAACGGAGGT
ATCGTCCAGA ACTTTGGCTC AACTCAGGAA ATTCTCTTCT TGGAAGTTGC GTTGACCGAA
AGCTGGGTTA TTTGTAAGCT TCTTTCCCCA ATTCACGGAC CAACGCTTAT CGGAGTATAG
TCATCACTCG ATTGGCCCAA GAGCCTGGTA CCCCCAACGT CTGGCCTTCA TTCCAGCTTG
TGGCTGCAGT AATTGGTGTC GATGCCTTGG CTACCATCTT TGCCCTTTTC GGTTGGATTT
CGGGTGATGC TCCTCATGGT GGTTGGACCG ATGTTGTCAC AGTTGTCAAG ATCTGGTGCT
TCAGTTTCGG CGTCGTCATC ATCATCCTCC TTGTCTGTGA GTACACTGAT TTCTAACTCT
TCGAGCATTG CTGACTATTC TTTGAAGACC TCATGCTCAA CTCAATCCGC TGGCTCGACA
GCATCGGCCG TAAGAGCCGG TCCAAGAAGA ATGAGAAGCT TGAAAACTTC CTCACCGATC
TTCAGCGTCT CACCATCGTG CACGAGACTG ACCACAATGG TTCCTACTAC CGATTCGCCT
CTACTAAGAA GGATGAGGAG GGCGGCGACA ACGGAAAGAA GGATGACAAG AAAGATGAAG
CCAAGTCTGG CGACACCAAG AAGCAGGAAG GTAATGCAAA GAAAGGAGAC AATGAGAAAA
AGAAGGATGA CAGTGAGGGA GAAAAGGGCG CTACCGGCGG AGAAAAGGGT GACGGTAATG
GAGACAAGGG GTTGAGCGAC CATACCGGCA AGGGCCATGA GCATGCCCAA GCTCAGAATA
AGGGCGCGAA GGAGGTTCAG CCAGATGGCA CTCAGCCGAA ATCGGATGAT CAGAGCAGTG
AGGGGACGCA TGTTGACCCC AATTAGGCGT TAAAGTGAAA CGAAGTGATC GTGATCAGAT
TAGAAATGCG GACGCTGTAC TGTACTGTAG CAATATCATC GAACCCATCG TTTCTTAGCC
GTTATATGCC GCATATCACA AGTATATTCA GACGTTATGT CATACCTAA
|
|---|
| Protein sequence | MMGLKNRKNH KKDPEAGDAE TEAKRQEEDK KKKYSGEEYD VLLKYVADQQ EKIKKGGDDE
GKEDEENVKY IRKWYTPWKK TKVETGGKKV PPDWLNTDRQ KGLSSSEIEE RRKHSGWNEL
ESPNENQFLK FISYFRGPIL YVMELAVILS AGLRDWIDFG VIIGILFLNA GVGWYQEKQA
GDIVAQLKAG IALKTVAIRD GKEEEIEARE LVPGDILVLE EGKTIAADAK IIGDYEDKDG
SKSKDILDRV EKSKHSKKGD DDDEDDGPDK GPSLCSVDQS AITGESLAVD KFIGDVAYYT
CGVKRGKCFG VVTVSAKGSF VGRTASLVSS SNEKGHFQIV LGGIGTTLLV MVVAFIFAVW
IGGFFRGTGI ATPRENNLLV YALIFFIIGV PVGLPVVTTT TLAVGAAYLA KRKAIVQKLT
AIESLAGVDI LCSDKTGTLT ANKLSLNEPY IAPDVDPNWF MAVAVLASSH NVLGLDPIDK
VTIVGLKDYP KAQEMLKGGW KTHKFTPFDP VSKRITAEVE KEGKHYTCAK GAPNAILKLT
KFDPDTVSAY RAQSQQFASR GFRSLGVAVK EDGKDWELLG MLCMFDPPRI DTAKTIGEAH
DLGIQVKMLT GDAVAIAKET CKQLGLKTNV YDSEKLIGGG MAGSDIRDFV EAADGFAEVF
PEHKYQVVNL LQERGHLTAM TGDGVNDAPS LKKADCGIAV EGASDAARTA ADVVFLDEGL
STIITAIKVA RQIFHRMKAY IIYRIALCVH LEVYLMLSIL ILNETIRVDL VVFLAIFADV
ATIAIAYDRA PYAHQPVEWQ LPKVWIISTI MGLLLAAGTW IIRATLWIDN GGIVQNFGST
QEILFLEVAL TESWVIFITR LAQEPGTPNV WPSFQLVAAV IGVDALATIF ALFGWISGDA
PHGGWTDVVT VVKIWCFSFG VVIIILLVYL MLNSIRWLDS IGRKSRSKKN EKLENFLTDL
QRLTIVHETD HNGSYYRFAS TKKDEEGGDN GKKDDKKDEA KSGDTKKQEG NAKKGDNEKK
KDDSEGEKGA TGGEKGDGNG DKGLSDHTGK GHEHAQAQNK GAKEVQPDGT QPKSDDQSSE
GTHVDPN
|
|---|
| |