| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CNG00350 |
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| Symbol | |
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| ID | 3258581 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_006692 |
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| Strand | - |
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| Start bp | 83220 |
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| End bp | 84626 |
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| Gene Length | 1407 bp |
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| Protein Length | 328 aa |
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| Translation table | |
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| GC content | 50% |
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| IMG OID | 638257648 |
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| Product | opsin 1, putative |
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| Protein accession | XP_571773 |
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| Protein GI | 58269234 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG5524] Bacteriorhodopsin |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.534586 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | AGTTATTCAG TGATCACTAG CCAGGATGGA TTACTTCGCA GAGTTCAGGC CTACCACTAC
CATTTCTGTC AACCCTCCCG GGGGCACAAA CACCCACCAC CCGGGTCCTC ACCATTCTCA
CCATTTGCCC TTGCCCACCG CACCTTTCGT AAGCGCCACT CTGTACTGTC CTGACTGTGA
GAGCTTGTAC TGACTCTGCT TTGATTTTGC AGCCATCAGC TACCCCAAGG TTTTTACATG
CCACTCGTGT CGGCCATGTC TCAGTCTGGG TATTCACTGC ATTGTTCATC GCCGGTTTGG
TGGTTGCATT GGTCTTAACT AGTAGGACTC AGAAGAAGAA CCGTTTATTC CATGGGTGAG
TTCAATCTTT CTATATAACA AAGTGAAGCC ATTAACATGT TTGCTGTAGT ATCTCTGCCG
TCATCCTCAC CGTCTCCGCC TTAACCTACA TGTCCTTGGC GACCCATATC GGATCCACCT
TTGTTCCCAT TTACGGTCCT CCCGGTCACC ACGAACCTCT CGTTCACTTC TTCCGTCAAG
TATTCTCGAT CCGCTACATT GACGCTGCCA TCACTGGTCC TCTCACCATT CTTGCTCTTT
CTCGCTTGGC AGGAGTCAGT CCCGCTACAG CGTTGAGTGC CGCTCTCGCC CAGTTGGTTG
TAGTATACTC TGCTTGGGCT GCAAGTGTCG GTGGCGGTTG GCCGTGGGGT AAGCACGGGA
AAGGTGCGGG GACCAAGTGG GCTTGGTTCG CAGTTGCCGA TCTTGCATTC TTGGCCGTCT
GGACCGTGCT TCTCGCCAAA GGTCGAAAAG GTAAGCTCTT TCCCATTCTG CAGCAGCATT
GTCAATCTTT CACATAGACT GACATCCACT TAGCCTCCGT TCACAGAGCT CGCCCTACTC
AAGGCTTGTT CTACCTTCTC TCCTCCATGA TCATCTTGTA TGTCATCAAC ACTTTCCTTG
CAATCGCCAC TAATCAACCA TTCACAGGAT TCACATCGGC CAAGGCGTCA TCTGGATCCT
CACTGACGGC ATTAACCTCA TCAGTGTTAA CGCTGAGATC ATCAGCTACG GTATCATGGA
CGTTGCCGCC AAGATCGGTT TCACTCACCT TCTTTTGTTG CTTCACAAGA GCGATGAGGA
GGGTCCTTGG ACCTTGCCTG CTTGGTGGGC TGAAGACCCT GAAGGTGCCG GACCCGATGG
TCGAGGTATC TATGGGGCTG TTACCAGCGT TGGTTCTGAC TAGTCCATGA GTGGCAGTTG
GTGGCCGAAA CTGTGACGAA AGAAACCGGT GCTAGGAAAG AGAAGAGAAT ATGTATGATA
GTAGATGAAA ATGAGTGATA ATGTCGCAAT GTACACGAAC AAGAGATGAC TTATGTTCAG
CAATTATGCA GATGTTCCTA TCGTAGT
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| Protein sequence | MDYFAEFRPT TTISVNPPGG TNTHHPGPHH SHHLPLPTAP FPSATPRFLH ATRVGHVSVW
VFTALFIAGL VVALVLTSRT QKKNRLFHGI SAVILTVSAL TYMSLATHIG STFVPIYGPP
GHHEPLVHFF RQVFSIRYID AAITGPLTIL ALSRLAGVSP ATALSAALAQ LVVVYSAWAA
SVGGGWPWGK HGKGAGTKWA WFAVADLAFL AVWTVLLAKG RKASVHRARP TQGLFYLLSS
MIILIHIGQG VIWILTDGIN LISVNAEIIS YGIMDVAAKI GFTHLLLLLH KSDEEGPWTL
PAWWAEDPEG AGPDGRGIYG AVTSVGSD
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