Gene CNG00130 details

Gene Information

• Locus tag: CNG00130
• ID: 3258618
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Cryptococcus neoformans var. neoformans JEC21
• Kingdom: Eukaryota
• Replicon accession: NC_006692
• Strand: +
• Start bp: 32643
• End bp: 34725
• Gene Length: 2083 bp
• Protein Length: 561 aa
• GC content: 48%
• IMG OID: 638257627
• Product: phosphomethylpyrimidine kinase, putative
• Protein accession: XP_571729
• Protein GI: 58269146
• COG category: [H] Coenzyme transport and metabolism; [K] Transcription
• COG ID: [COG0351] Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase; [COG0819] Putative transcription activator
• TIGRFAM ID: [TIGR00097] phosphomethylpyrimidine kinase

Plasmid Coverage information

• Num covering plasmid clones: 21
• Plasmid unclonability p-value: 0.45662
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GAATAAGTAA CGAACGACAC AGAGTAAGGA ACATTTTGCT TAGAGAGCAA CATCTCTCTT 
TTGTGTAGAC AGAATGGCAA GCAGAAACGA GCTGTCACTT GAGCCCCGTA CCAGACCTCA 
TGTTATGACC ATCGCTGGTG AGCTTTCATC CTTGTTGACA ACGCTTGGCA GACTAATATC 
ATCGACTCGA TAGGCAGCGA CTCTGGCGGC GGTGCTGGTA TTCAGGTAAG TGTTCACATC 
TCGGGTTGAT ATAAGTTGAC ATACACCTTA GGCCGACCTC AAAACTATCG AGGCCTTTGG 
GTGCTACGGC TCGTCCGTAT TGACTGGCCT TACTGCGCAG AACACTCTTG GTGTCCAGGC 
AGTCCATGTC GTACCGACCG ACTTTGTCAT CCAGCAACTC CAATCTGTCA TTTCAGATGA 
ACTCCCCAAA GCCATCAAGC TCGGAATGCT CACTTGCGCT TCTACCATTC GCGCCCTCGC 
CCGGGAAGTT TCCAAGCTCA ACACAACAAT CGTCCTCGAC CCTGTCATGA TCTCTACCAG 
CGGTCACACC CTATTACCGG ACGATGCTAT GGAGGCGCTT TACGAGCTTT ATCCCCACGT 
TGACTATCTT ACACCCAATA TTCCCGAAGC TAAAAACCTT TCTGGATGGA GTCATGAGAT 
TAAGAACTTG GACGATATGA TTGAGCTCGC AAAGAAGACC AACGAGACGA CGAAATCCCC 
TTCTGTGCTT TTAAAAGGTG GACATGCAAT TGTTTCTCGT GAAGAGGTGC TCAAGTATGC 
CGGAAAGTAC GAACTTATCT GGGAGGAGGG CGATGATGAG GATGACGCTG TGGAAGTGTA 
CAATGAATAC AAGGAATCAC TCGATATAAA TATCAAAACT CAGAAAGACC TTGTTGTTGA 
CTTGTTAATA AAGGAAGGCG AGATCATAGC GATGTTTGTG GGGAAAAAAG TGGACAGCCA 
GAGTACTCAT GGTACCGGAT GTACCCTCAG TGCGGCTATC GCTTGTTCTA TTGCCGTCTC 
AAGCGAGGTA GCGGACGGTA GGTGCTCCTT TTGAGTGTTG GGATTAGCTC ACTTGGATTT 
GTAGCGAAAT CCTTGATATC CGTCTTCAAA AGGGCGATCG GTTATACCCA ATCTGCCATC 
GCTACCGCTT TCCCATTTGG TCATGGCCAT GGCCCTCTTA ACCACGGTCA TCTCAGTATG 
CGCCGAGCTC TCCCTTTGTA CCTCCAGCTT TGTTCCGTCC TGTGGCTTAC CGTTGACACC 
ACTGTAGTCC ATCAAAACAC AACCCTCACC CCTTTCTCAC ACATCTCATT CAGTCTGATC 
TTTCCTTATG GAAATCCTAC GTCCGACATC CATTTGTCGT CCAACTCGGT AAGGGTACCC 
TTCCCAGAAA GTGCTTTGAG CATTACATCA AGCAGGATTA TCACTACCTG AAACATTGTA 
CGTCGTCTTC CCATCTCAAC TCATGAATCC GCTCATTTCA ATTTACAGAC GCCCGTGCTC 
ACGCTCTTGG TGCTTACAAA GCCGACAGCT TTGAAGATAT CAAAGCGTTC ACCGAAATAT 
CCCTGCACAT TGCCCGAGAA TCCACCATGC ACGTCGCCTA CTGCCAAGAA TTCGGCGTCT 
CACTCGCCGA CCTCGAAGAA ACTCCCGAAT CAGCAAACTG CTCTGCTTAC GCACGGTACG 
TCATCGATAT CGGAACTCAG GGAGATATCC TTGACCTCTA CATGGCTGTG GCGTCGTGTT 
TGGTTGGCTA TGGTGAAGTA GGGTTGTGGT TGAAAAAGCA GGTGGAAAGG GGGGAAGCAA 
AGGTGGAGGA TAATCTGTAT GGAAGGTGGA TGACGGATTA TGGGGGGAGA GACTTTTTGA 
ATGCAGTGAA TAGAGGTATT GGTGAGTGAA TTGAGACGGC CGGACTGAAT TTCCAAAGTT 
GACAGACGTT TGTGGTAGGA AACCTGGAAC GACGTGTAGC TCAAGATCCA CCATCTCCGC 
AGAGACTCGC GAAGCTCACT AAAATTTGGC AGGAGTGTGT CAGACTCGAG TCTGGGTTCT 
GGGATATGGG CTTGAATCTA CTATAGAATT TTTACATTGT GTC 

 

Protein sequence

MASRNELSLE PRTRPHVMTI AGSDSGGGAG IQADLKTIEA FGCYGSSVLT GLTAQNTLGV 
QAVHVVPTDF VIQQLQSVIS DELPKAIKLG MLTCASTIRA LAREVSKLNT TIVLDPVMIS 
TSGHTLLPDD AMEALYELYP HVDYLTPNIP EAKNLSGWSH EIKNLDDMIE LAKKTNETTK 
SPSVLLKGGH AIVSREEVLK YAGKYELIWE EGDDEDDAVE VYNEYKESLD INIKTQKDLV 
VDLLIKEGEI IAMFVGKKVD SQSTHGTGCT LSAAIACSIA VSSEVADAKS LISVFKRAIG 
YTQSAIATAF PFGHGHGPLN HGHLSMRRAL PFPSKHNPHP FLTHLIQSDL SLWKSYVRHP 
FVVQLGKGTL PRKCFEHYIK QDYHYLKHYA RAHALGAYKA DSFEDIKAFT EISLHIARES 
TMHVAYCQEF GVSLADLEET PESANCSAYA RYVIDIGTQG DILDLYMAVA SCLVGYGEVG 
LWLKKQVERG EAKVEDNLYG RWMTDYGGRD FLNAVNRGIG NLERRVAQDP PSPQRLAKLT 
KIWQECVRLE SGFWDMGLNL L