| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CNF04900 |
|---|
| Symbol | |
|---|
| ID | 3258383 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_006691 |
|---|
| Strand | + |
|---|
| Start bp | 1427106 |
|---|
| End bp | 1428648 |
|---|
| Gene Length | 1543 bp |
|---|
| Protein Length | 381 aa |
|---|
| Translation table | |
|---|
| GC content | 53% |
|---|
| IMG OID | 638257608 |
|---|
| Product | conserved hypothetical protein |
|---|
| Protein accession | XP_571621 |
|---|
| Protein GI | 58268930 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0673] Predicted dehydrogenases and related proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 36 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ACTTGTCCTA GCTACACACA ACTCGCACAA TGGCACCGTT CACTGTCAAT TGGGGTATCA
TTTCCACCGG AGGCATCTCC ACTACCTTCG CCCACGACCT TCTCGTCGAC CCGGCCTCCC
GTAATACTAA GGATGTAAAC CACAAAATTG CTGCTGTCGG CTCCCGCTCC GTTCAATCCG
CTCAAGCATT CATTGACAAG CTCAAGGAAA GCTCCGAGGG GAAACCATGG GCTTGGGGAG
TGAAGAATGG CGTTCTCGAC GGTGTCAAGC CGAGGGGTAC TTACGAGGAA GTCTACAATG
ATCCTGTACG TAGTCTGGGC TCATCTTAAT ATTGCGATGA GGCGTATTGA CGTACTTCCT
CTCACAAGTA GGATGTCACA GCCATCTACG TAGGCACTCC CCACGTTCTC CACCATCGTA
ACGCGAAAGA CGCTCTACTG GCTGGTAAAC ACGTCCTCCT CGAGAAGCCT GCTTGTCTCG
AAGTCGAAGA GTTAGACGAG TTGATCATGA TTGCAAAGGA GAAGAAGCTT TTCTTCATGG
AGTGAGTCAC ATGTCTTCTT CTCTCTTTGT TCTTGTCCCT TTTTTCCTTC GTAAGCATGT
TTGCTGATGA GCGACGGCGC AGAGCTGTGT GGACGCGGTT CCAGCCCATC GCTTACGCCG
TTGAAGAAGT GATCAAGTCC GGTATTCTCG GTAAACCCAG ACGTTTTTCT GCCGATTTCT
CCATGGACTG GAACTTGGAC GGTGCGTTCC CATGTCCCTG TCTCACAACC CATAACCATT
GCTGACTTGA CACCATTTCA GCCGACTCTG GCCGTATGGC CAACCCAGCT CTCGGCGGCG
GCTCGCTCCT CGACATGTCC GCCTACCCCT CTGTCTGGGC CATGCTCCTC GTCCACCGCA
ACCCTTTCAA CACCGATAAG GACCCCAAGG TGCTCTTGAC CCATCAAACT ATTTACCCTC
GCACTGGAGT GGACATCAAC TCGAGGTGGT TGGTGGAATG GAAGGGGCTT TGCCAAGGAA
TGCTGATGAC GGATTTGGAT AATGCGGGAC AGAAGGATTC GACCGCGGTT TTGCAGTGCG
AGGAAGGGGA TTTGGTTATT GCCTGTACGT TCCCTCATTC CTCTCCCTTT TCTCTCGCGC
TAAACTTTTT CTTGCCTCTT CCCCTTTCTT TCTACGTATA GACCCCCCTT ACCAACCCGA
GACATTCTAC ATCCACCCCC GTCCCTCCCG CTTCCCCGGT ACCATCACCT CTTCCACCAC
TCATTATCAC CCCCTCCACG ACGGGAACAA TGGAATGTCA TACGAAGCAG ATGAGGTTGC
GAGGTGTATC AGGGATGGGA AGATTGAGAG TGAGAGGATG CCATGGGAAG AGAGCAGGGT
GGTGCAGGGG TGGGTTGATA AGGTGAGGAA GGAAGGGCCG ACCGAGACTG CCAAGTTGGT
GGGGACTGCT GGGCAATAGA GTAGGAAGCG GCAAGTGACA AGTGACGAAG GTCCTTGTGA
GATAGATCAA AAGTAGAGGG CGAAAACGAA TATGCAGACA TCA
|
|---|
| Protein sequence | MAPFTVNWGI ISTGGISTTF AHDLLVDPAS RNTKDVNHKI AAVGSRSVQS AQAFIDKLKE
SSEGKPWAWG VKNGVLDGVK PRGTYEEVYN DPDVTAIYVG TPHVLHHRNA KDALLAGKHV
LLEKPACLEV EELDELIMIA KEKKLFFMEA VWTRFQPIAY AVEEVIKSGI LGKPRRFSAD
FSMDWNLDAD SGRMANPALG GGSLLDMSAY PSVWAMLLVH RNPFNTDKDP KVLLTHQTIY
PRTGVDINSR WLVEWKGLCQ GMLMTDLDNA GQKDSTAVLQ CEEGDLVIAY PPYQPETFYI
HPRPSRFPGT ITSSTTHYHP LHDGNNGMSY EADEVARCIR DGKIESERMP WEESRVVQGW
VDKVRKEGPT ETAKLVGTAG Q
|
|---|
| |