| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CNF04450 |
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| Symbol | |
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| ID | 3258041 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_006691 |
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| Strand | + |
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| Start bp | 1291529 |
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| End bp | 1293308 |
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| Gene Length | 1780 bp |
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| Protein Length | 413 aa |
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| Translation table | |
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| GC content | 58% |
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| IMG OID | 638257563 |
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| Product | pyruvate dehydrogenase e1 component alpha subunit, mitochondrial precursor, putative |
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| Protein accession | XP_571697 |
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| Protein GI | 58269082 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1071] Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit |
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| TIGRFAM ID | [TIGR03182] pyruvate dehydrogenase E1 component, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.0649859 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | CCTCCCTCTC CCTCCACCCA CCTCCCACCC CCCCCGTCTG CAGCCATGTC CTTCGCCCTC
CGTGCCCGTG GCCTCCGCGC CGCCACCCGC TCCCTCGGCG CCGTGAGTCC CCCGCCCCCC
GCCCCCCGCC CCCGCTGACT CCCCACAGAA GCCGCTCCGT TCCACCCTCC CCCAGGTGCG
CTACGTGCAG ATCGACGCCG ACAAGTCCTC CCCCATGCAC GACCTCCCCG CCTCCGGTTC
CGAGCCTGTA TGTCCCCTTG TCGCCAGGCG CACGAGATTT AGGACGGGCT TGCTGACAAT
TTGTTGGGGG AAAACAGTTC AAGGTCCAGC TCCACGCCGA CTCGTTCCAC TCTTACCGAT
GCGATGCCCC GCCTCCCGAG ACCACCGTCA CCAAGGACGA GCTGATCAAC ATGTACCGCA
CCATGGTACG TCTTTTGGGG ATCGAGGAGA GCAAAGAGAC GTGCCTGCAT AGTCGACGGT
GAACAATGGC TGACCCCTCG CAGGTCCAGA TGCGACGAAT GGAGCAAGCC GCCGACGCCC
TTTACAAGCA AAAGCTTATC CGAGGCTTCT GCCACCTTGC CATCGGCCAG GAAGCCGTTT
CCGTCGGCAT GGAGACCGCC ATCACCGGCC AGGACCGGGT CATCACCTCT TACCGATGCC
ACACTTTCGC CGTCCTCCGA GGTGGTACCA TCAAGGGCGT CATTGCCGAG CTCATGGGCC
GAAAGGACGG TATGTCTTTC GGTAAGGGTG GTTCTATGCA CATCTTTACT CCGTCATTCT
TTGGTGGTAA CGGTATCGTC GGTGCCCAGG TATGTCTCCT CTTTTTTTTT TACTTTACAC
CTAGCTAATA ATACCCAGGT CCCCGTCGGC GCCGGTGTCG CCCTTGCCCA AAAGTACAAC
AAGGAGAAGG CTGCTACGTT TGCGCTCTAC GGTGACGGTG CCGCTAACCA AGGCCAAGTC
TTTGAGGCTT TCAACATGGC CAAGCTCTGG AACCTCCCCT GTGTCTTTGT CTGTGAGAAC
AACAAGTACG GTATGGGTAC TTCTGCCGAG CGATCTTCCA TGAACACTCA GTTCTTCACC
CGTGGCGACC AGATCCCCGG TCTCCAGGTA GGTCCACCAC ATCCCGCCGG AAAACAAAAA
GCTGATAGGC GGCTAGGTTA ACGGTATGGA CATCCTCGCT GTCCGAGAGG CCACCAAATG
GGCCAGGGAA TGGGCCACGT CCGGCAAGGG TCCCCTCCTC GTCGAGTTTG TCACCTACCG
ATACGGTGGC CACTCCATGT CCGACCCCGG AACCACCTAC CGAACCCGAG AAGAAGTCCA
GCAAATGCGA TCTTCCCAGG ACGCCATTGC CGGCTTGAAA AAGTACATTC TCGAATGGGG
AGCGACCGAT GAGGCGAGCT TGAAGGCGAT TGATAAAGCC GCCAAGGAAG AGGTGGATGC
CGCTGTCGAG GAGGCCAAGC AGAGTCCTTT CCCTGACCAG GTCGAGTTCT GGAGTGACAT
CTACGTACGT CCCCGAGCGC CCTTTTACCG TTACCCCGAA ACTGACGTTT GACTATTTGT
TACAGTACAA GGGTTCCGAG CCCACTCATA TGCGCGGCAG GGAGAAGGAG GAGGTCCACT
ACTACAACAA GTCTGCTTAA ATACAACTCA AAAAAGGCTT CTTATGCCGT AGGCATGTAT
GTAGGGGAGG GAGAGAGAGA GAGAGAGTAG TTGGTCCTTA CATTGTTCTC GGGGCTTTCC
TTTTTTATTT CGAGAGGGTT ATGCAATTAG ATTCAACGCA
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| Protein sequence | MSFALRARGL RAATRSLGAK PLRSTLPQVR YVQIDADKSS PMHDLPASGS EPFKVQLHAD
SFHSYRCDAP PPETTVTKDE LINMYRTMVQ MRRMEQAADA LYKQKLIRGF CHLAIGQEAV
SVGMETAITG QDRVITSYRC HTFAVLRGGT IKGVIAELMG RKDGMSFGKG GSMHIFTPSF
FGGNGIVGAQ VPVGAGVALA QKYNKEKAAT FALYGDGAAN QGQVFEAFNM AKLWNLPCVF
VCENNKYGMG TSAERSSMNT QFFTRGDQIP GLQVNGMDIL AVREATKWAR EWATSGKGPL
LVEFVTYRYG GHSMSDPGTT YRTREEVQQM RSSQDAIAGL KKYILEWGAT DEASLKAIDK
AAKEEVDAAV EEAKQSPFPD QVEFWSDIYY KGSEPTHMRG REKEEVHYYN KSA
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