| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CNF04270 |
|---|
| Symbol | |
|---|
| ID | 3258043 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_006691 |
|---|
| Strand | - |
|---|
| Start bp | 1238201 |
|---|
| End bp | 1239691 |
|---|
| Gene Length | 1491 bp |
|---|
| Protein Length | 209 aa |
|---|
| Translation table | |
|---|
| GC content | 47% |
|---|
| IMG OID | 638257545 |
|---|
| Product | ubiquitin conjugating enzyme, putative |
|---|
| Protein accession | XP_571703 |
|---|
| Protein GI | 58269094 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG5078] Ubiquitin-protein ligase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.0194964 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATTTCTGCGT TTTCAAACAG GCTCGGTCAA TGATGCCTCC TACTCCCCGC ACCAACGCTA
GCTCATCCTC CTCCCCTTAT CCTCCGTCCC GCCCCAACTC TGCAAAGCCC GCCATTTCTT
CAAATGGTAA CTCCAGTACG GCAAATTCGT CACTGATACT CCGCAAGCAG CTTATGGGTG
GGTTACTTTG GATTCTGCCG TACTGCTGGC CGTAAAGTCG CGATACTTAA ACGGCAACAA
GGGACAAATG CGGGGACGAT TTGCTGACAA GTTTGTAGAG CTCCAGAAGC ATCCCGTGGA
CGGATTCTCT GCTGGTCTTG TGGACGATGA TAACATGCTG GAGTGGGATA TCGTCATTAT
GGGGTACATA ACTTCCAGTT AACATACTCG GTAATGCGTC TGCTGACTTA TTTCCAGTCC
TGTGGATACT TTATGGGAAG GCGCCATTCT CAAAGCTCGA CTCATTTTCC CTCCTGTATG
TCTCTTTCAT GCTACTATAC AGTTGACGAG ATAGGGTGGC AAGCTGACTG TGATGGCAGG
AGTACCCTTT ATTACCCCCA AAGATGATCT TCGATTCTGA AATGTGGCAT CCTAATAGTG
CGTCTTATCC ACTTTCATTC CGTTTTCCTG TTCGGTCCTA TCATCCTTTC CGCCCTCGGT
CTCTTTCTCA TGGATTGCGC TAAATTTGAT TGTACCACTC CAGTATACAA CAAGGGCGAT
AAGAAGGGAG AAGTCTGTGT TTCTATCTTG GTAAGTCCTG GAAAATTATG CTTATTCATC
GCATTTGCCA CCCACATCCC ACCTTCAATT TTTGCTGACG TACTTTCCTT CTTATCTTGC
TTCTCATCAC AGCACCAGCC AGGTGAAGAT GAATGGGGGT TCGAAGATGC AGGAGAAAGA
TGGTTACCCG TCCACACGGT TGAATCTGTC GTACGTCCTT CGCTACTATT TGCGGCAGAT
TGTCATGCTC GTTAGCTAAT CTCTTCTCTT GCTTCCATCT TCCTCACATC TGTTGGCGCA
TTTTAACAGT TGATTTCCGT CATCTCCCTT CTCTCTCAAG ACGTCCCAGA CCTCTCTTCC
CCCGCCAACG TCGATGCGGC CAAGGAGGTT AGGGAAGATT ATCCCTCATA CAAGAAGAAG
GTTAAGCGGT TGGCAAGGAG AAGTGCTGAG GAGGCTTATG ATTGATGCTG TTACATGTCT
AGAATGGGAA AGTTGGCAAT GACCCATGGT GGAATCCATT GGTTGAATCC ATGTGTGTAG
AAGGGAGAGA AAGACGAGGA TCGTAATATA ACATGTTTGT CGTACTATAT AGCTCGGACC
TTTTTGTGCT CCTGCCTTCT GGTTCTCCAT CTTCCCATTG CCATCGCCTT TTGCATAATT
ATTCACTACT TCGCTTTTCA GTTTCGAAGC CCAGAATTTC GATCACATTT CATTATTTTC
ACTGTACCTA TGCTCCAATT TCCGTCGGAA TTATGTATGC GCATTTACGA T
|
|---|
| Protein sequence | MMPPTPRTNA SSSSSPYPPS RPNSAKPAIS SNGNSSTANS SLILRKQLME LQKHPVDGFS
AGLVDDDNML EWDIVIMGPV DTLWEGAILK ARLIFPPEYP LLPPKMIFDS EMWHPNIYNK
GDKKGEVCVS ILHQPGEDEW GFEDAGERWL PVHTVESVLI SVISLLSQDV PDLSSPANVD
AAKEVREDYP SYKKKVKRLA RRSAEEAYD
|
|---|
| |