| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CNF04130 |
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| Symbol | |
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| ID | 3258454 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_006691 |
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| Strand | - |
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| Start bp | 1197175 |
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| End bp | 1202706 |
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| Gene Length | 5532 bp |
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| Protein Length | 1485 aa |
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| Translation table | |
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| GC content | 46% |
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| IMG OID | 638257531 |
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| Product | DNA polymerase alpha catalytic subunit, putative |
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| Protein accession | XP_571383 |
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| Protein GI | 58268454 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0417] DNA polymerase elongation subunit (family B) |
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| TIGRFAM ID | [TIGR00592] DNA polymerase (pol2) |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.717791 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCGAAGG ACGCTTTGAA GACTCTGCTG GAATGTCGTG CGAAGGGTGG CCGACTTTCA
CTTTGGAAGG TGCGTGCACG CGTTCGCGTT GAGCAACAGA AAATAGACGC GTACTGATTT
GGTCTGCTCG CAACGTCTTT GCCACATTGA ACAGCCCGAA GAAACGAAGA TTTACGACTC
CGTCACAGAC GAACAGTATC GCTCCATTGT TGGCTCGCGT AACGATCAAG ACGACTTTAT
CGAGGATGAC GACGGTGGTG ATTATGTCGA CCACGGGTTG GAAGACTGGG ATGGTGCGGA
GAGAGATGAC GAGGAAAGTG AAGATGAAGA TGATTTTGAA GGGGAGGACG AGGAGCTGAG
GAAAGGTAAA TGATGCTAAT GCGTGCTCCT AATGACTTCC AGCTGACGCG TCAATGCAGC
GCGAAAATTG AAAAGAGCTA AGGCCAAAGC CAAAGCACTC GCCAGTTCTG GTAAAGCTCC
CAAATCATTA AAACCCAAAC CCAAAGCGAG CTACTCTGAC TATTCCCGAC GCTCTACATC
ATCAACCTAT CGTGCTGCTG CCATCCCCAG CGCGATACAA GAGGACGATT TTATGGCCAA
TCTCTTGTCC TCAGTGACAG CCGCTTCAAA TGAGACGGCT AGCCGCAAAC GGAAGTCTTC
TCCAGAGATC CCGTCCTCCG ATGGTTACCA AGCTCCCAGT TCCGATAGCT CGTTCTTTTC
ATCGAGGAAG AGGTACGGAG GGGATAGCGA TGACGAGCCT GTATGGGACG CGAAGCGCGG
CGTGATGGGC AAGAAGCCTC GGGTTTCAGA TGCTACTATC ACCCCGAGAG GGATGAGTCG
TGACAGGGAT CAAGAAAACG AATATTCATT CGACGATACT ATGGATGTTG AGGATGTAGC
TGTCAAACCC GAGCTTGTAG ACAGTGAGGA AGAAGAGGAG ATTCAAGTGC GCAAAACCAG
ACCTCTCACA GCAACCAACA AACTCAATGG TGCGGCCGGT GCTAAGCGCA AAGTTATCAA
CTCAACGTCT GTCAAGAACG TAATCAAGCG GGAGCCCTCA CCTGTCCTTG CCATCGCTCC
AGAAGCCGCG CCAGAAATAG AAGAAATACA ATCTGTCAAG CCTCGTACCA ATGGCAAACC
CAAAGTCAAA GCAAACGCCA AACATTGGTC CGCCATTCAA GAATCCCTTG CGGCATCTTC
CTCCAATCAA ACATCTGAGC TTGATACCGT CAGCGCCCCT GTTGGTTCAA CAAAGCCCGA
GAATGTAATG GAGAAGGATG GTTCATTGAG ATTCTTCTGG CTTGACCACT TGGAGCAAGA
TGGAATCGTT CATCTCGTGG GTAAAGTGCT TGACAAGCAA ACGGGAAAGT ATGTCAGCGC
TTGTGTCTCG GTGACGGGAA TTGAGCGGTG TCTCTATGTC AAGCCTCGTG CCAAACGATT
TGGTACGTTC TTTATGTTAA AATCAGAACT TTCATCTGAC TATTTATAGC TCGTGGATTT
GAAACCGATC TCGACGTGTC GGAAGAAGAC GTTTTAGACG AGTTCGAAAA CTTCCGTTCT
CAAGTAGGTA TCGATCAGTA CCGTTGCAAG TTTGTCAAGC GCAAATATGC ATTTGAGGAC
AAGGATGTGG AAAAAGGAGA AAGCGATTGG TTAGAGGTTG TCTATGGTTT TGACCGTGAG
TCTTGCGTTC GGGTTTACCG ACTGGTGCTG AACAAAATAG AACCTGCTAT CCCTATGGAC
TCGAATGGTG CTACTTTCAG TCATATCTTT GGCACAAACA CCACTCCTTT CGAGTTGTTC
GTCGTTAATC AGAAGATTAT GGGTCCTTCA TGGCTTGAAA TCAAAGATAT CGCTCCTGTT
GAGAAGGCTG TATGTCTTAT GTTTTGCGAC ATTGAGTAAG TGCTAACTAT TTGCAGTCAT
CATGGTGCAA GCTTGAGTTC TATGTGACCG ATCCCTCAGA AGTCAACCCG TTCTCCGAAA
CCGACCCTTC CGCACCTAAA GACACGCCCC CTTTTACTAT CATGTCCATT TCCCTTCGCA
CCATCGTTAA CCACCGCGAG AACAAGACCG AGATTCTGTC CGTCTCCATG AGAACATGGG
ATAATTATAA CATTGAAGAT CCCACCCCTC CTGATCAACT CCGATCGCAA CTCAACACCA
TCGTCCGACC TATCGAGCGA TTTCCCAGCG GCCTCGAATC CAAAGCGCGA TCAGAAAAAT
CCCAATTCCA AACGGTGAAA ACGGAGCGAG CACTACTCAA CTCTATGTTG GGTATGATCT
ACCGCCACGA CCCCGATGTC ATTGTGGGGC ATAATTTCTT GGGAGGCGGG TTTGAAGCAT
TACTGTATAG GATGAAAGAG CTCAAAGCAG ATCATTGGTC GAGAATAGGA AGGTTCAGGA
GAAAGGGAAT GAATGTTAGT AAGATGGGAA GTAATGTAAA GCTCATGGCC GGTCGTTTGG
TTGCGGATTT ATCAAGTGAT GCCGCCAAGG TCAGCGTTCT TACTTGTGTG TTCTAGATCA
TCGGCTAACC ATTATGACAG GGTATGATTT CATCAACGAC CTGGTCTCTC ACCGAGATGA
CCAACACCCA CCTCAAGGTC CAACGCGAAG ACATTGACCC AGAAGACACT GCCGGTTATT
TTGACCATAC TGCCACTTCA CCTGATAGAT TGATCAAGTT TATCAGACTG TGTGAAGTCG
ATGCCTTTTT CCAGATGGCG ATTGCTGCTA GAGTACAAAT CTTGCCATTG ACCAAGCAGC
TGACCAACTT GGCTGGTAAT TCATGGTGAA TATTTTACAA TTAAATCTCG GATTTAGAGC
TGACGGATGA CAGGAATTTG ACCCTCAACG GTGGTCGTGC GGTCCGTAAT GAGTTTATCC
TTCTCCATGA GTTCCACCGA CTTGAGTACG TCTGTCCAGA TAAAGCGCCT TACAAGGCAA
AGACCAGACC GACTGGGGAT GATGATGAGG TTACGGAAGA CATTATAGCG ATGAAAGGCC
AGAGAGGAAA AGCCAAGTAT GCTGGTGGTT TGGTCTTTGA ACCTAAAAGA GGATTGTGGG
ACAAGTACAT CATCATCATG GACTTCAACT CGCTTTATCC AAGTATTATT CAAGAATACA
ACATCGATTT TACAACAGTT GAGAGGGACG ATGATGAGAA TGTAAGTTTT TGTGGAAATT
TTCAAGCAGG TTGACTAATG AAAAACAGGC CGAAGAAGAG AAGATCCCAG ATGTTCCTTC
AAGCGATGTA CCTCAAGGTG TTCTACCCCG TATTATTGCG ACTCTCGTCA ACCGGCGTCG
TCAAGTCAAG GCCCTTATGA AGGATAAGTC CGCAACCCCC GCTAAGCTCT TACAAGTATG
CCATTACAGA AATTTCTTTT CACTTCTTGT GATAATGGCT GATGCCATGC GCAGTATGAT
ATCAAGCAGC AAGCTCTCAA ACTCACTGCC AACTCGATGT ACGGTTGTCT TGGTTTTGCT
GGTTCTCGAT TCTCCTCGAG ACCACTGGCC GCATTGACAA CCTTCAAGGG TCGAGAGATT
TTAACGCACA CCCGGGAGTT GGCTGAGTCT CTGCAGCTCG ACGTGAGTTG CTTTCCAATG
GGAAGGACCT GGGATCCAGC TGATAGAATG TATAGGTCGT CTATGGTGAT ACCGACTCTG
TCTTTGTCAA CTCCAATGTC ACAACCTACC CCGAAGCTCT CAAGATTGCC AATGAGTTCA
AGAAGCTTGT CAATGAACGA TATAAGCTCC TCGAAATTGA CTTGGACGCC GTATTTGAAC
GAATCTTGCT TCTGAACAAG AAGAAGTATG CTGCTGTCAA GATCGATGAA GCTGGGGAAA
GAAGTACTGA AGTTAAGGGT TTGGATATGA AGAGAAGAGA GTTCAGTAAG GTTTCAAAGG
ATGCAAGCGC GTGAGTATCC GCTTTGGCTT TGCCCATCGA AATATGGTAT TGATGACCAT
GATAGTGCGA TACTGAAGGA GATCTTGAGT GGTGAAGCTA CAGAAGTCGT GGTTGAGAAG
ATTCATGAAC TCCTCACCAA GCTAGGAGAG GCTGTACGCA ACAACGAGAT TCCTATCGAT
GACTACATCA TCTTCAAGGT GAGTTCGATC ATGGAAGCCC CACTGTCTTA TGTCGCTAAC
CACCGCCTTC TAAAAGCGTC TTGGTAAAAA CCCCGAAGAT TACCCAGACA AGAAATCTCA
ACCCCACGTT CAAGTCGCTC TTCGTATGAA ACAAAAAGGT GCCGCTGTTC GAGCTCATGA
TGTTATTCCC TATATCATCT GCTTGGACGA ACATGGAAAG GGCGGAAAGA CGGCGTCTGC
GGATCGGGCT TTCCATCCTG ATGATTTGAG AAGGCAAGGG TCGGAACTGA GAATTGGTGA
GTCAGGGTGG GCTAAGTAAG TTCAAATGAT GAAAGCTAAT GGCATGTAGA TCACGAGTAC
TACCTTGATC AGCAAATTTT ACATCCCATA TTGAGGTTAT GTGAGACTAT AGAAGGCACT
GAGCGAGCAC GATTAGCAGA ATGTCTTGGT GAGTAATTAT CATTCCCGAC CTAGAGTTCA
CCATCTAAAC ATGTATAGGT CTTGATCCTT TGAGATATAC CTCGACAGGC ACAGCCGAAG
CTCAGGAAAA AGAGTTCTTC ACTTTTGATT CCCAGATTTC GGACAACGAT CGTTTCCGCG
ATGCTGATCC CCTCAATCTC GTCTGTCCAT CTTGTAGCGA GGAAACAGTA TTTGTAGGCT
TGCAGACTGA CGCTTCTGAA GTGGTACGTC TTTCTGAAGA CTGAGTCATG ATTTGTTGCT
CACATGGATG CGGCATTAGT CCAATATCCG AGCAAACGGT ATTTGTTGCA ATTCTTGTCA
GTTAGTCATC CACCCCGCCT CTTTACAACT CCAGCTCGAA AACCAAATTC GATCCCATAT
CTCAAAATAC TATCTTGGAT GGATGACTTG CGATGGCGAA GGTTGTGGAT TGAGAACGAG
GGCCATGAGT GTATATGGAA AGAGATGTTT AGGGTTTATC AAGGAGAATT GCTGGGGTAC
AATGAGGCTT GAGGTGAGTA TCGGCGCTCC TCGTTCTAGC ATGAAGATTG ACCAATAACA
TCCCTATAGT ACACGGATGC AAAACTGTAC AATCAGCTCT TGTATTACCG TAGTCTGTTT
GACGTTGAGA AGATCCTAAA TGCTGTGCGA GGCTCGCAAC GTTTCGGTGA GCATCTTCTC
TACATTTTTT TTCTAACTTT TTTTTTGGCG CTGGCCGTTA ACAAAGAACG CAGACGAAAT
CCGACCCTTG ACAACCGCCA ATCAAAAAGT TTTATCAGAA CTTGTAGCTG TCACAGACAT
GTACCTTGAC AAAAACGGGA GAAGATATGT CGATTTAAAG GGGCTGTTTG GATTCATGGA
GAGGATTAAG ATTTGAGAGA GATGTCGAGA CGATGACCAT CAAGTAGAAG AGCGGTCGAT
GTGTAGATAG GATTTTTAGT TTGTGTTACT GATTTTTGGT TTTCGCTCAG ACGATTTTTT
GTACGGTATT TG
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| Protein sequence | MSKDALKTLL ECRAKGGRLS LWKPEETKIY DSVTDEQYRS IVGSRNDQDD FIEDDDGGDY
VDHGLEDWDG AERDDEESED EDDFEGEDEE LRKARKLKRA KAKAKALASS GKAPKSLKPK
PKASYSDYSR RSTSSTYRAA AIPSAIQEDD FMANLLSSVT AASNETASRK RKSSPEIPSS
DGYQAPSSDS SFFSSRKRYG GDSDDEPVWD AKRGVMGKKP RVSDATITPR GMSRDRDQEN
EYSFDDTMDV EDVAVKPELV DSEEEEEIQV RKTRPLTATN KLNGAAGAKR KVINSTSVKN
VIKREPSPVL AIAPEAAPEI EEIQSVKPRT NGKPKVKANA KHWSAIQESL AASSSNQTSE
LDTVSAPVGS TKPENVMEKD GSLRFFWLDH LEQDGIVHLV GKVLDKQTGK YVSACVSVTG
IERCLYVKPR AKRFARGFET DLDVSEEDVL DEFENFRSQV GIDQYRCKFV KRKYAFEDKD
VEKGESDWLE VVYGFDRESC VRVYRLVLNK IEPAIPMDSN GATFSHIFGT NTTPFELFVV
NQKIMGPSWL EIKDIAPVEK ASSWCKLEFY VTDPSEVNPF SETDPSAPKD TPPFTIMSIS
LRTIVNHREN KTEILSVSMR TWDNYNIEDP TPPDQLRSQL NTIVRPIERF PSGLESKARS
EKSQFQTVKT ERALLNSMLG MIYRHDPDVI VGHNFLGGGF EALLYRMKEL KADHWSRIGR
FRRKGMNVSK MGSNVKLMAG RLVADLSSDA AKGMISSTTW SLTEMTNTHL KVQREDIDPE
DTAGYFDHTA TSPDRLIKFI RLCEVDAFFQ MAIAARVQIL PLTKQLTNLA GNSWNLTLNG
GRAVRNEFIL LHEFHRLEYV CPDKAPYKAK TRPTGDDDEV TEDIIAMKGQ RGKAKYAGGL
VFEPKRGLWD KYIIIMDFNS LYPSIIQEYN IDFTTVERDD DENAEEEKIP DVPSSDVPQG
VLPRIIATLV NRRRQVKALM KDKSATPAKL LQYDIKQQAL KLTANSMYGC LGFAGSRFSS
RPLAALTTFK GREILTHTRE LAESLQLDVV YGDTDSVFVN SNVTTYPEAL KIANEFKKLV
NERYKLLEID LDAVFERILL LNKKKYAAVK IDEAGERSTE VKGLDMKRRE FSKVSKDASA
AILKEILSGE ATEVVVEKIH ELLTKLGEAV RNNEIPIDDY IIFKRLGKNP EDYPDKKSQP
HVQVALRMKQ KGAAVRAHDV IPYIICLDEH GKGGKTASAD RAFHPDDLRR QGSELRIDHE
YYLDQQILHP ILRLCETIEG TERARLAECL GTAEAQEKEF FTFDSQISDN DRFRDADPLN
LVCPSCSEET VFVGLQTDAS EVLVIHPASL QLQLENQIRS HISKYYLGWM TCDGEGCGLR
TRAMSVYGKR CLGFIKENCW GTMRLEYTDA KLYNQLLYYR SLFDVEKILN AVRGSQRFDE
IRPLTTANQK VLSELVAVTD MYLDKNGRRY VDLKGLFGFM ERIKI
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