Gene CNF03880 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCNF03880 
Symbol 
ID3258269 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameCryptococcus neoformans var. neoformans JEC21 
KingdomEukaryota 
Replicon accessionNC_006691 
Strand
Start bp1132634 
End bp1134263 
Gene Length1630 bp 
Protein Length454 aa 
Translation table 
GC content50% 
IMG OID638257507 
Productimport inner membrane translocase subunit tim44, mitochondrial precursor, putative 
Protein accessionXP_571344 
Protein GI58268376 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.826599 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATCTTCGTAT AAAAAAAGCA TCAAAATGCA CTCCCGACCA GTCTTCCTTC GTGCTCTTCG 
ACTCCGACAA CAGCCACTCC CCGCCCGCCG ATTCCTCCCT CCCCAGTCGC TCCGTCCCCT
CTCATCTACA GCCCGTCTCT TGGACGAGTC GAAAAAGTCT GAACAACAAT CACAAAAGAA
AAAGTCAACC AACGATGAGC CTATCACCCC TCGATCTCCG TGGGCCGTTT TCACCCAGGT
CTTAAAGGAG GAGATTGAGA AGAACAAGGG GTGGCAGGAC AATGTCAAGC AGTTGCAAGG
TGATGTTGAC AAGTTCGCCG ATAGTGCTGC TATGAAGAGG GCCAAGGATG TGTATGAGAA
GACTAGGGTG AGCTGGTTGA ATGAATAATT TACACGCAAT TTCTGATTTT TTCTAGCTCA
CCAACTTGAT CAAAAACAAT CCTCGAATCC AATCTGCAGT CGGTGATCTT CAAAAGGCTG
GTATCTCCGT GCACGACGCT GTCCAGCACG CTCTCGCCGA TTCCGAAGTT CTCAAGGCCA
TCTCTGCCGC TACCAACCGT TTCGTTTCTG CCGCCTCTAG CGCTACTGCG CCCATTAGAG
ACACAAAGGC GTACAAGTTG ATGGCTGAGA GTCTCGAAGA GGCCTTTGAA GATGAGAGTG
GTGTTGGGAG TAGATATGGT GGTTACGAGG AGAAGGAGGC TAGGAGAAAG AAGAGGGAGA
TGAGGGCTAA GAAAGCTGGA AGAGCTGCCA TCAAAAGGGT CGAGGAAAAT CCTGAGTGAG
TTGAGTGCTT CCGATATAAC GGCGTCAGCT AATCCCACTT GTAGAGCTGG TGAGGCTCTT
GTTCTCTCCG ACAAGCCCGA GTCCGTCTCT CGTCTTGCGT TTATCAAGGA ATCCCCCACC
TATCAACGTA TGATGGAGAA TTACTATGAG TCTGACTCTC CCTTCGTTTC TGCCATCCGA
ACCATCGGTA CCAAGGTCGG CTCTTTGTTC GAAGAGAACG AGACCGCTCA AGTCATCCGT
GCCATGAAGG CTTTAGACCC CAATTTTAGG ATGGACAGGT GGACTGGGGA GTTGAGAGAG
TACATTGTAC CTGAAGTTGT CGATGCCTAT CTGAGTGCAG ACAGGGAAAG CTTGAAGGCT
TGGTGTGGTG AAGCTGTCAG TCAAAAATTC TCCGCTGATA AACAACCAGA CTGACACTCT
ATAGACCTTT AACGTCCTTT GGGCGACCAT GGGCCAATTC ATTAAACAAG GCCTTGTTTC
CGACTCGAAG ATCCTCGACA TCAAGCATGT TGACATTGCT CACGGCAAAA TGCTTGAGAA
CAACATCCCA GTGTTCGTCA TTACCTTTGC CACCCAAGAA CAACTCCTCT TCCGATCAGC
CAAGACCGGA AAGGTTGTTG TTGGATCAGA GGATGATGTT GAGCAGTGCA GGTACGCGAT
GGTGATTACG AGGTTGGAGT CAGAGTTGGA GAATGAGTTG ACTGGCGGCT GGAAGGTTGT
TGAGGTGAGT TCTCTTTCTC TCTCTTCTGA TCACTGCTGT GCATATGCTG ATGGAACATA
GATGGCCAGG AGGGGTGCCA GAGGTGGACT GTAGACGACT TCAGGATAAT TGCATGCATA
GCAACACCAT
 
Protein sequence
MHSRPVFLRA LRLRQQPLPA RRFLPPQSLR PLSSTARLLD ESKKSEQQSQ KKKSTNDEPI 
TPRSPWAVFT QVLKEEIEKN KGWQDNVKQL QGDVDKFADS AAMKRAKDVY EKTRLTNLIK
NNPRIQSAVG DLQKAGISVH DAVQHALADS EVLKAISAAT NRFVSAASSA TAPIRDTKAY
KLMAESLEEA FEDESGVGSR YGGYEEKEAR RKKREMRAKK AGRAAIKRVE ENPEAGEALV
LSDKPESVSR LAFIKESPTY QRMMENYYES DSPFVSAIRT IGTKVGSLFE ENETAQVIRA
MKALDPNFRM DRWTGELREY IVPEVVDAYL SADRESLKAW CGEATFNVLW ATMGQFIKQG
LVSDSKILDI KHVDIAHGKM LENNIPVFVI TFATQEQLLF RSAKTGKVVV GSEDDVEQCR
YAMVITRLES ELENELTGGW KVVEMARRGA RGGL