| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CNF03770 |
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| Symbol | |
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| ID | 3258340 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_006691 |
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| Strand | + |
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| Start bp | 1102012 |
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| End bp | 1107380 |
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| Gene Length | 5369 bp |
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| Protein Length | 1535 aa |
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| Translation table | |
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| GC content | 50% |
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| IMG OID | 638257496 |
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| Product | conserved hypothetical protein |
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| Protein accession | XP_571670 |
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| Protein GI | 58269028 |
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| COG category | [A] RNA processing and modification |
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| COG ID | [COG5183] Protein involved in mRNA turnover and stability |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.703411 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GAGCGACGGA CAGATTTCTT CTGACTATAT TACTCTTCTG ACTTCGATCT TCCTCTTTCC
TGCATAGAGA CAAAAATAAT GGCTGAAGAT ATAAATATTT TCGCAGACGA AGAAGGCGGT
GAGTACGGTC TCGAGCTCAG CACAATCATT TCTGCGCCGT ATCTGACAAC GTCCTTTTAG
ATGTCTGCCG AGTTTGTAGA TTAGGTGAAG AGCCAGATAA CCCTCTAGTG TATCCATGTA
AATGTTCTGG ATCTGTTAGA TTTGTCCATC CAGACTGGTA TGCCTCATTG TTTTGTTTTT
TAATGCAAAC TGGAGCTGAT GGACCATGCA GTTTGAAGCA ATGGGTGGCA CAGTCACAAA
AAAAGCATTG TGAAATATGT GGTCACAAAT ACACCTTCAC AAAAGGCAAG CCATATACCT
CAGAAATGAA TGTTCTGACC TTCCACAGTT TATCCAAAAG AATTACCCAC TGTGATCCCG
ACAACAGTGT ATCTACGACA AGGTCTTTTG TTCCTTCGGC GGCAGATCCT CTGGTTCCTA
AGGGCATGGC TAGTCGTCAT CGTTTGGCTA GTTATCCTTC CTGCATGGAA TATTGGTGCT
CTCTTCTTCA TGTCTCTACT ATCAGATCTG ATGTGAGTCG CTTTTCCATT TGGCATTTCG
TGCTTGCTAA CCGTCGCACA GAGGCCTGAA AGCACCACCT AGCGAAGAAA CAATAGATTC
AACTACCAAC GCCACCATTA TTGAATCCGC CGTCGCCTCC AACGCAACTA CCTACACGCC
GAGTTTTGTT TCTTTCCCTT CCTTTATTGC CAGCCCCTTC CTCTACGCCA ATAACGTCGT
CAGATCTTCG TTCCAGAAAT GGTTGCAAGG CGAGGAAAAC ACGGCTGTCG GATTTGTGCT
TCGTGGCCAA ATCCTCTCGC TCTCTATGGC TGCTGTCCTT ATTGGCCTGG TTCTTCTGAG
AGAATGGGTC CATCAGCATA ACTGGCAAGA AGCTGAACAG CCACCCAGGC ATATTGAACC
TGAACCCAAT CCAGACGAAT GGTTCATTCT CCACGGTGTG GCTAGACGGC AAGCTGACGT
CATTGCCCGT GTTTTGGAAG CTACTCGAAC CAGAGCTCCA TTATCACTCC GGACTGCTAG
ACATGACTTG CCCCCCGCTG ACGTTCCTGG CGAAGCGTTG GGTGATGAGG CAGGAAACGA
CGATAACGAT GCTGGCAACG ACGCTTCCGA GAGGCTAATG ATTGGGGCAG GGCAAGAATT
GAATGAAGAG TGGTGGGCGA GGCAAAGAAC ATGGGCAGAA GGATTGCCGG CAGAGCACAG
AGGAACTTTC CACGAGATTC TGACCAGTCT ACAGGCAACT GCCAATGCGG CACAAAAGGC
TGAATTGGAA GGGCAGAACC GAGACGTTCC TCCTGCGCAA ATTCTAACCG ACAACCCTCT
TTTCCGTAAA CCCGGTATGC CTATAGCCGA CATTCCCAAG CAAGACCTTG AAAACTTACA
AGCCGGCTCT CAAATCCACA TTCTCCCATC TCAACAAGGA ATCCCTCCCA GAAGCTGGGT
CGAAGCTCCC CAAGAAAAGC AAGGACAGGC AGAGATCGGC AATGATCATC CGGATAACGA
AGAATCCGGC AGCGCTAGTT CTGAAGCGTC TAAGCAAGGG GAATCCATGG CCTTTGACGC
TCTGGCCGAA TACCGTCGTT TCCATGCCTT GCGAGAGCAA CAACAAGCTG ATGTCGCCCT
TGATTCTGCC GACGACGATG ACGACGAAGG TCAGGGCCGA GCGGGACCTT CAAGGCCAGC
ATGGAGCAGG AGAGCGACAG CCATTGATGA TGAAGAGAGG GAAGAACGTG ATCGAGTGGC
ATACAGTGCT CCAGAGTTAT TGAAGGAGGA TGAAGTTGAG GACAAGGCAA ATGGAAAGGG
AAACGCGAAG GGAAAGGCTC CTGCAACCGA TGAGAACGTT GAAGATAAAG AGGAGGGAAC
AGCATTTGGG AGGACTGAAG CCCCTTGGAA ACCTCTCTTC GACCCTCCCC AATCTGATGA
CGACAGCCCT CAGCCTAAGA CTGACGAAGA AGATGGTGAT GAAGGTGACA ATGACGGCGA
CGGTGAATGG GAAGACGAAC CTGACGCCCG ACCAAACCCG TTCAACTTTG ATCTTAATAA
TTTGCAGGCA CCCGTCGCCA ATGGGGTTGT GCTTGCCCCC GTGCATGATC AACAAAATAT
CAACGCTCTC GGGAACTTCA ATCTCGCTGC CTTCAACGAT CTTCCCCCTG CCTTCGCCAA
TGTACCGGAG GGCAGAATTC GGCTTGTACA ACCTGAGGAG CTTGGCCTCC CTCGTGCTAA
TGTTGGAGCC AATGTCGAAT TCGTAGAGGA AGAAGAAGAC CAATGGGACC CGGATGATTG
GAATGGTGTT TTAGAAGTTG TCGGACTTAT CGGTCCTATT CATGGTCTTT TCCAGAATGT
ACGTTTTTCA TCTGAGTTGA CGGGGATAAG CTGATGGACT GTATATAGCT CATTTTTGCG
CTCTTTATCA TGGGTTTCGG TATTATCCTT ATTCTCGGTG TTCCGATGCT CATCGGCAAA
CTCTTCCTTT CTTTCGATTT TTTCCGCACC GCTCTCGGTG TCTCCTCGAA GATCCTTACT
ATTATCAGAA AAGTGACCGA CCCTGTGGTC GACATTGTGT TCGAAATTGT CAAAGACGTC
GTCGTGTTGC CATTGATGGC TTCTGGTAGG GCTGCTGAGA AGATTGTCGC AAAGAAGCTG
GGTCTGGAAG TAGGTTATCG ACTTGGGTCT TCGAGCGGAG GGTTTAGTCG CCTCACCGCC
GGTCAAAGCG CTTCTCGACT CTCTCCAATT TTGGAAAAGG CTGGTGACTA CATTGCCACC
TTTGGGCAAT TCTGTTACGA CTCGTACAAC AGTATCCTTA CCTTCGAGCA CCATATTGCT
ACCTCCACTT CATTCTCGGG CCGCGCTGCT TGTGTCGCTA CTGGGTACGC TTTTGTTGCT
AGCCTCGTCA CTCTCACCGC TATCGCCGGC AAGGCCCGTC TCACCCGTAC CGCAACCGAA
TTTGCCGAAA CATTGGATCA GCACTCCAAC TTTGTCAAAG TTGCCTTTTT CATGACTCTC
GAACTTGTGG CGTTCCCCCT TTGTGTTGGT GGCATGATTG ACCTTTGCCT CGTTCCTCTT
TTTCCGGGTG CAACCATCTT GTCTAGATGG GAAAACCTAG TGTGCTCACC TTTTGGAACC
GCATTTATTG ACTGGTTGCT GGGATCGATG TTCATGTTTT CGTTTTCGAC ACTGTTAGGC
CAGGTGCGAA AGGTGACCAG ACCTGGCACT ATGTTCTTTG TGAGAGATCC GGGAGATCCC
AACTTTTCTC CTGTCAAGGA CATCGTAGAT AAGACAACTT TGCATCAACT CAGGAAGGTA
AGATATTCAG ATAACTCGGA ACGACGAACA TAAGCTGACA AGAGATTAGC TCGGTTCATC
TGCCATCATG TACAGTGCGG TGGTGTTCAG TCTCTTTGGT GTAGTTTCTT GGGGACTGGC
CTATGTCCCT GGAGGTTTTT TACCTCTCAA GGTGGAGCCG ACTTTGTACG CTCTATTGTA
TAATTTTAAT AAAGAACAGA AGCTAATTCT TCTATACAGC GGTCCGATCA CATCAATCCC
CTTTGACCTT CTCTTCCTTC ATCTCGCCAT ACCGCCTACT ATCGACCTGG TCCGTCCTCA
ATCCCGTGCT CGCCGATTAT TCACCCAGTG GTGGCGAGCT GTTACCACCC GCTATCGTCT
CACCAACCTC GTCGCCCCCG TTCCCAACGA GAACGAACGT TCTGAAGCTC CGACCAAGCT
TGAAAATGCC CTATGGCCCA TCTGCGATTG GATCTGCCAA AAGCTGTTTG GCAAATATAG
GACTGAAGCG ACAGACGCGC GCGTCCCCGC CAGTGATTCC GTGGTACTCA TGCCTATTGA
ACAACGACGT AAGGAGGGCG GTGTCTTTGT CCCTCTTGAT GGGTCTGGTA TTCCTTACAA
CCGCGCCGAT AAGCTTCGTC TTCTCAAACA GGACAAGATT GCCCGGGAAG CTGGAAGATT
ACCGACAAGT GACTACACAG TTGTCTGGCT GCCCAAGTAT TGGAGGACTA GGATACATAT
GTTCGTTGCT AGTGCATTGG CGAGCATGTC GATTGTGATT GCCTTGGCAG CTTTCACGCC
CGTGGCTGTA GGCCGTATGA TGTGGAAGAC GTTGGGGATG GACGTGCATG ATGGATACAG
CTGGGTAAGT CATTTTGGGT CTACTTTTGC ATCAAGGGAT TTGAAATGCT GAACAAAAGT
CATAACAGTT TGCGGGAGCA TACATCCTCT ACTTTTCTCT TACCCTCGGT CGCCGCGCAC
GCAAGCACAT TACCAACTTC AACCGCGCCG AGCGTCTTCG TGCATCCATC TTCTCCAAGC
GAGTCAAGCG CGGCGTTCTT CGATGGATTG CCGGAACATA CGGTGTTATT ACCTTCTACG
CAGTTGTCCC CGCTTTGGTC GGAATGGTTA TTGATGTCTA TCTGGGTGGT CTCTGGTCGG
ATAGGAACAA TGTGGGGAGA GTCATCCATG TTTGGGACGC TTGGTAAGCC TCACTACCCC
AATTGTGAAA GAATTGAACT GATGAGGAAG TTGTAGGGCT ATGGGCACTG CATTCTGTTC
GGTCATCGTT GGTGTTATAG GTTTGTTACC TCGAGCACGC CGTACAGGCC TTCATACCGT
TTGCGAGGTT AGTTTTTCCG GCAATTATAT CAAAATTCGG TCAAGCTGAC GACTATTGGT
AGCGTTTCCG AGAGCCGGCA GCCAAGGACT TCAAATCTAC TACCCGACTC GCACGCCTTG
TTCTCGTTCC AAGCGTGATT CTCCTTGTTG CTCCGCATGT GGTCGGAACA ACATTGGTCG
AGCTGCTGCC TGAAAGCGCC AATCAGGAGG AAAACAATGC GATCTTATGT GAGTCTGTTC
TTTTTTCCCC GGCCGGGAAA GAACGGGATT GGCGTGCTGA CAGTTCCATC TTAGTCCGAT
CCGTCGTTCT TCCGCTCATG CTCATTCTCT CTGTTGCCTA TGCTACATCT CGGTACTTGG
AAGCTGAAGC TTCTGTCATC AGACAAAAAG TTATTGAAGC GGAATATGTT GTGGAGGAAC
GAGTTGAGAA TTATGTGCCG CCGGCAAATG ATGGTGGACA GAGTGGGAAG TTAGGGTCGG
GTGGTGCCGG CCCTGGATCG ATAGGTGACA ATGCCGAGAA AGTTGCGGTA ATTGGTGAAG
GTGACGATGA TTGGGAGGAT ATGTAAGGGG TTTTTGCATA TGGATGTTGA AGTGTAAGAG
TAGATTCGGT CATTCCATGT ATCGCTGTC
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| Protein sequence | MAEDINIFAD EEGDVCRVCR LGEEPDNPLV YPCKCSGSVR FVHPDCLKQW VAQSQKKHCE
ICGHKYTFTK VYPKELPTVI PTTVYLRQGL LFLRRQILWF LRAWLVVIVW LVILPAWNIG
ALFFMSLLSD LIGLKAPPSE ETIDSTTNAT IIESAVASNA TTYTPSFVSF PSFIASPFLY
ANNVVRSSFQ KWLQGEENTA VGFVLRGQIL SLSMAAVLIG LVLLREWVHQ HNWQEAEQPP
RHIEPEPNPD EWFILHGVAR RQADVIARVL EATRTRAPLS LRTARHDLPP ADVPGEALGD
EAGNDDNDAG NDASERLMIG AGQELNEEWW ARQRTWAEGL PAEHRGTFHE ILTSLQATAN
AAQKAELEGQ NRDVPPAQIL TDNPLFRKPG MPIADIPKQD LENLQAGSQI HILPSQQGIP
PRSWVEAPQE KQGQAEIGND HPDNEESGSA SSEASKQGES MAFDALAEYR RFHALREQQQ
ADVALDSADD DDDEGQGRAG PSRPAWSRRA TAIDDEEREE RDRVAYSAPE LLKEDEVEDK
ANGKGNAKGK APATDENVED KEEGTAFGRT EAPWKPLFDP PQSDDDSPQP KTDEEDGDEG
DNDGDGEWED EPDARPNPFN FDLNNLQAPV ANGVVLAPVH DQQNINALGN FNLAAFNDLP
PAFANVPEGR IRLVQPEELG LPRANVGANV EFVEEEEDQW DPDDWNGVLE VVGLIGPIHG
LFQNLIFALF IMGFGIILIL GVPMLIGKLF LSFDFFRTAL GVSSKILTII RKVTDPVVDI
VFEIVKDVVV LPLMASGRAA EKIVAKKLGL EVGYRLGSSS GGFSRLTAGQ SASRLSPILE
KAGDYIATFG QFCYDSYNSI LTFEHHIATS TSFSGRAACV ATGLVTLTAI AGKARLTRTA
TEFAETLDQH SNFVKVAFFM TLELVAFPLC VGGMIDLCLV PLFPGATILS RWENLVCSPF
GTAFIDWLLG SMFMFSFSTL LGQVRKVTRP GTMFFVRDPG DPNFSPVKDI VDKTTLHQLR
KLGSSAIMYS AVVFSLFGVV SWGLAYVPGG FLPLKVEPTF GPITSIPFDL LFLHLAIPPT
IDLVRPQSRA RRLFTQWWRA VTTRYRLTNL VAPVPNENER SEAPTKLENA LWPICDWICQ
KLFGKYRTEA TDARVPASDS VVLMPIEQRR KEGGVFVPLD GSGIPYNRAD KLRLLKQDKI
AREAGRLPTS DYTVVWLPKY WRTRIHMFVA SALASMSIVI ALAAFTPVAV GRMMWKTLGM
DVHDGYSWFA GAYILYFSLT LGRRARKHIT NFNRAERLRA SIFSKRVKRG VLRWIAGTYG
VITFYAVVPA LVGMVIDVYL GGLWSDRNNV GRVIHVWDAW AMGTAFCSVI VGVIGLLPRA
RRTGLHTVCE RFREPAAKDF KSTTRLARLV LVPSVILLVA PHVVGTTLVE LLPESANQEE
NNAILFRSVV LPLMLILSVA YATSRYLEAE ASVIRQKVIE AEYVVEERVE NYVPPANDGG
QSGKLGSGGA GPGSIGDNAE KVAVIGEGDD DWEDM
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