| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CNF03450 |
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| Symbol | |
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| ID | 3258362 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_006691 |
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| Strand | + |
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| Start bp | 1019695 |
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| End bp | 1024580 |
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| Gene Length | 4886 bp |
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| Protein Length | 1380 aa |
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| Translation table | |
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| GC content | 48% |
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| IMG OID | 638257463 |
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| Product | conserved hypothetical protein |
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| Protein accession | XP_571415 |
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| Protein GI | 58268518 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5422] RhoGEF, Guanine nucleotide exchange factor for Rho/Rac/Cdc42-like GTPases |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATAACAGCTA TCCATAAGCA AAGCGACCAG TGAGAAAAAT GGGACCACTG TTATCACCGA
CCAAACCACG GCCTCTCTCT AGACATCGTT CAGCTGAACC ATTCCCCCCG GCCCCTCCTC
CAAAAGCCAT CGACCTCAAC AGCTCTACAA GATCCACAGA CAAGGATACT GGTAGAAAGA
TCACTCGACG AGCGTTCTTA TGTGATGTCA TCATTGAGAG AGAAGGTGAA GGTATGTGTA
TGCTCGCAAA TGGAGACGAG AGATAAGTTA CTCACATTAT ATATGCAGAA ACGGCAAATC
TCCTTGCGCA CCTTGGTGAA CCGCTTAAGC CTCTGTCAAC TCTCCCTCCT CCTGCGCAGA
CAACTAATGG TAGACCAACG ACTCCATCGC GACTTTCACA ACCACCTGAT TCGGATGATG
ATGCGCGCGG GAACACAGGG CCAGTGTGGA CAGCTGTGAA GAGCGATGAG ATGAAGAAGA
AATTGGCAAA TGTCATCGAA GAGCTAGTGC GGACAGAGAG GAGCTACCTA TCAAGGGTTC
ATGCCCTTAA GACTGTGAAT AGGTACCATA TGCCCGGTGC TCATGCGCTG ATATTTCACT
TAGGCTTACG CAGACAGATT GCGGCTTTAC TCCAAGGATC CCAACCAGCA GCTGATACCG
CCATACGAAG CCAAAGCAAT GTTTGCGAAT ATAGAACTCA TTGTACCCGC GTCAATGACA
TTTCTGGGTG ATTTAGAAGA GATGATGCAA TCTGGACATG CTGAGGATCT TGTCGGTGAT
GTATGCCTGA AACATGTAAG TTTAGTGAGT ATCACAAACT CATGCATCGA TTGACTTATG
AATAGTTCAA AATTCTCCGA ACGTTTGATC CATATAGAAC ATATTTGAGC AAACAAGATG
AGTCACAAAA ACTCTTTCAG GATTCTTTAA AGAAGTTCAT AGGGTTTGGG ACCTTCATCG
AGGTGAGTGG CTCAACTATG GACGGTGGAT GAAGCTCATA GCTATGGAAA ATTAGAGCAC
TAAATATCAG ACCACTGGCA TTGGAAATAT TGGCCTGAGA GAATTGCTCA TGGAACCTGT
ACAACGCATT CCGAGGTATA CTCTCCTTTG GCAAAGTACG TACACTTATT TCAAGTCTTA
GAAACAATGA CTAATGGTCG TCCAGCGATG ATAAAATGCA TGTCTCCTCT TTCGACTCAG
CGTGCTAAGC TCCTTGAAGC CATTGAAATT GCATCTGGTA TTGCAAGGTG TGAACCAGAT
GCACAAACAG TCAGGGCAAC AGTTATGTAT AATTTGGAGA GGAACATTGA TAACTTTCCG
GTGAGTGGTA TGGCTTTGTC ATGCGTCATA TCGCTGACGC AAAGTACAGG CCAAGCTTTT
CAGTAACAAC CGGGACTTTA TCGATGCAAT CGACGTGGAG GATATCCCTG CTGAATATCC
CACAGCGCAA TGTCCCAATG GTCGACCAAC CTCCATTAAT TCTCGCATTG CAGTTTCTAC
CGCCTCAACA CCATCTTTGC CTGCGTTTGG CTCTCTCCCA TCAACCGGTT CGCATATACC
TCAATCACCT CAATCCGCAA CTTCCGCCAT GCCAACCCTT CACTGCACCC TATTCTTGTT
TGATGACAAG CTTATGATTG TCAAGCGACA ATCGTCTTCC ATCAGTGGTC GGAAAATTAC
CGGTACTGAC GATGTGCAAA AACTTGTGAA ATCGGGAGGG GGTATCGCAG TAAAGGAAAA
GAACAACGCA AAGAGGGACA AATTGAGCTA CCGAGGCGAG GTTGATATTT TGGATGTGAT
GGCATCAGAT GTCGGAAATG GTGACTTTCA CCTTTTCTTT GAACGCCCTC CTGCGGATCA
GTGTGGCCGA TGGGGCAATA GATCATTCCG GTCATATTCC ACAGTTCACC CTCCCTATTC
GGTTTCTCTT GACCCTGTTG CAACACGAAA GGACAAATTG CGATTCATTC AGAACCTCTG
GGCCGCGCAA GCTCTTGCTC GAGCTAAGGT GCTACCATCT TCAGAAAGTA AGGCTGTTCC
CCGAGTCTTA CAAAGCGAGA CCGAGGTCGA TTTCGAAGGC GGGGATTTGG AGCGGGCTAC
ATGTTTCTGG GATGTTTGGA ACCGGAATGA ATGGTGTGGC CAGAGGAAAG GCAAGGTCGT
CATCCATGTT GATGAAGACG GGATGGCTCC TGCGTTGCCG ATAGACACGA GGAGTACAAA
ACTGAGTGTC TACTTACAGC CAATGGCGGG TGGTCTTTGT CGATATGCAC ACAGCGTGGC
AGGAAAGGAG GAAGCAGAGA GGATAGTGGT AGACATGAGC GAAGTCAAGG AGAAGATAGC
TTCTACAAGT AAGTCATTTC AAAAAGTCTG CGCTGATGAT TAGTCAACCA TTATGGCATC
TTCAAATTCC GCACCGGCAC CATTTCTTGT CCCACTACTC CGTCGTCTGG TACCCATCGC
ATTCGCCCAT CTATGCTCAA TCTTGACACC ATCTCTCGTA ATCTCTTCGG TGCTGGTAGC
GTCTCTGGTA GGAGCGGCAC CAGTAATGAC ATGTTTAGCA CCGCCGGCTC GAAGAGGGGT
TCAAAGTACG CGATGAGCAG ATCGTCCTCC ATGGAAACGA GCTTATATTC GACGGATGGA
CATGAGGAAA AAGAAGCGAG CAAGAAAAAA TTCTCGAAAA TTTCACTATC GCCGGACCCT
CATAGCCTCA TCGCGGGAGC ACCATATGCT GCCGAAACAG ATAACATCCG ACAAAGTGAG
ATCGATTTGA ACCAGAGGTT GGACGCTGCG AAGAAGAATG GACAATCTAC GACTCTTAGT
TCCGGCACTG CACCTAAATT AAACAAATTG GGAAACAGAA GTGTGACAGA GTTGAGGAGG
AGTAATGAAG GAATAGCGGA AAGGCACATT TCTTGTAGGA CGACTGGAAC AAATTCTCCT
ATTCCTCCCA GCTCTCCTTC GAAATCAAGT TCACCACTTC GAATTAGAAA CGCTACGCCT
CCCAAACACC CTGCCAGTCC AGATACCGAC ACCACTCCTC AAGCCCGTCT ACCGCCGCCA
ATAATTACTT CTCCAGTCAC AGCTCCTCTC AATATCCGTA AGACTCCTAG TAGGGCCCAG
ACAATCAGTT CTGAACATGT TGTGACCTCT CCCAGTCGTG CGACAAGCCC CGCGCCCAGT
GTTGCAATCG CACCGACTTA TTATCTTCCG TCCGACCCAT CTCTCACGTC AAAGCCTTCC
CTTTCGCACA AACCTTCCAC GTCTCGACCA GGAGGCCCCA GGGGACCAGT TCCTCGAAGT
CCCCTCCCGA CCATCAAAAC GCAGCTTCCT AGTACTGCTA TTACCTCCAG TTCTACTGCT
GGTTCTCGTC ACACTGGGTT GAGGATTGTC TCTGGAAATG GTCGTCGCAT CTCCCTCAAT
CGAGAAACCG TTCCACTCAA AGGTGAAGAA GAGAACGACC CCTTTGCTAC CAATACACCC
TCCATACCCT CTACTGCCAA ACGACAGCAC TCTGTAGAAA GTCTTTCGCC ACGTAAACGT
TCACCTTCCC TCGGCAAGAG CCCGTTGGGT GAGGTTGGCA ATAATCCTCC ACTGGTGATT
AAGCCTCACC GGAGGACATC AGCCAAGGCT GGCACGCCCA GAAGAACTAG TGGTCCACTC
ATGAGTGCAA GGACAGTGTC AGCTTCCCGT AGCTCAATCA ACAGTGTTGC TAGCGCCGAC
ACAATCAACA CAGTGAACAC TGCAGGGACA TGCGGGGGTG GAGAGGACGT AGAAATGAAA
GAATATGAGG ATGTTGTCGG AGCCATGGAT GCCACCCTTA ACAAGGTAAG TGACATGATT
GATTCTTGAA GTAAGCAGAT GCTGAGATGA ATACAGATAC GCGATGCGAG AGGGTCTGCA
AAGCGACTAA AGTCTGAGGT GTCGGGATTG AGGAAGCAGA TTATTAGAGA ATCTGGCAAG
GCAAAGCAGT CGTTGGCGGT CAAGATTGAC AGAGCCGGAT CATTACCCAG AAGCCCTCAG
AAGCGTCATA TCAGCGTAAG TTATTCGTAC GTCACATCAA GGCCTAAAGC TAAATTACCT
GCAAGCGAAT GGTTGAACAA GATGTTTATG ACCTTACACC ATCTCTTTCC CGTCAATCTT
CTCAGTCCAA GAAAGACATT GAAATCGACG TTATGGACGA GTGCGCTCGA GGAATCGTGC
AGATCACTCA AAGGATGGAT TTACATCTGA GACAAGCAGA AATGGATGCT GAACAGGCAG
TAGTTTTAGG CAGGTGTGCT ATAGCAGAGA ACGATGAGGT AAGTTAGATA GACTCGACTG
ACAGAATTAA GCTTATCAAG AGCAGAAATC CCAGGAGATC AGTATGTTGA AGGGTCAACT
TGAGAGATCG AGAGAGCATC ACGAGCTGCT GCAACGTCAG CTAGGTGATG CTCAGATTGA
GCTGGATGTT GTTTATGAAG TAGATCAATT CACCTTCAGG TTGCATATTG AGACTGACCT
ATACAAATCA GGCGTTCAAT ACTGAGCTTG ACGGCATGTT CAATGACGCT CAACTTCCGG
AAGACGAGGC CTTCCAAGCG TTGCGTAACG ACTTGCAGGT GACCAAGGCC AACAGGAATG
TGTTGCAACT GGAGAATCAG AAGCTGAAGA GAGAGTTGGA AGAGGCTAAT TTAAAGAGAG
ACCAGTGAGT TGCTCGGTTA CTGATCTTAA GGCCCTCACT GATGGCGATC CAGATGGGCA
AGAATCTTGC GAACTCAGGG ACACATTGTA TAAGGATTTC GTATTGTTTT CCTAAAACGG
ACATTCGCAT CGTTGTTTAT AACTTTTGTT GATTTATCAT TGAGGTAGCA TATCCGGCAC
AAGATGGCAA TCTTCCGTTG TTGATT
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| Protein sequence | MGPLLSPTKP RPLSRHRSAE PFPPAPPPKA IDLNSSTRST DKDTGRKITR RAFLCDVIIE
REGEETANLL AHLGEPLKPL STLPPPAQTT NGRPTTPSRL SQPPDSDDDA RGNTGPVWTA
VKSDEMKKKL ANVIEELVRT ERSYLSRVHA LKTAYADRLR LYSKDPNQQL IPPYEAKAMF
ANIELIVPAS MTFLGDLEEM MQSGHAEDLV GDVCLKHFKI LRTFDPYRTY LSKQDESQKL
FQDSLKKFIG FGTFIESTKY QTTGIGNIGL RELLMEPVQR IPRYTLLWQT MIKCMSPLST
QRAKLLEAIE IASGIARCEP DAQTVRATVM YNLERNIDNF PAKLFSNNRD FIDAIDVEDI
PAEYPTAQCP NGRPTSINSR IAVSTASTPS LPAFGSLPST GSHIPQSPQS ATSAMPTLHC
TLFLFDDKLM IVKRQSSSIS GRKITGTDDV QKLVKSGGGI AVKEKNNAKR DKLSYRGEVD
ILDVMASDVG NGDFHLFFER PPADQCGRWG NRSFRSYSTV HPPYSVSLDP VATRKDKLRF
IQNLWAAQAL ARAKVLPSSE SKAVPRVLQS ETEVDFEGGD LERATCFWDV WNRNEWCGQR
KGKVVIHVDE DGMAPALPID TRSTKLSVYL QPMAGGLCRY AHSVAGKEEA ERIVVDMSEV
KEKIASTINH YGIFKFRTGT ISCPTTPSSG THRIRPSMLN LDTISRNLFG AGSVSGRSGT
SNDMFSTAGS KRGSKYAMSR SSSMETSLYS TDGHEEKEAS KKKFSKISLS PDPHSLIAGA
PYAAETDNIR QSEIDLNQRL DAAKKNGQST TLSSGTAPKL NKLGNRSVTE LRRSNEGIAE
RHISCRTTGT NSPIPPSSPS KSSSPLRIRN ATPPKHPASP DTDTTPQARL PPPIITSPVT
APLNIRKTPS RAQTISSEHV VTSPSRATSP APSVAIAPTY YLPSDPSLTS KPSLSHKPST
SRPGGPRGPV PRSPLPTIKT QLPSTAITSS STAGSRHTGL RIVSGNGRRI SLNRETVPLK
GEEENDPFAT NTPSIPSTAK RQHSVESLSP RKRSPSLGKS PLGEVGNNPP LVIKPHRRTS
AKAGTPRRTS GPLMSARTVS ASRSSINSVA SADTINTVNT AGTCGGGEDV EMKEYEDVVG
AMDATLNKIR DARGSAKRLK SEVSGLRKQI IRESGKAKQS LAVKIDRAGS LPRSPQKRHI
SRMVEQDVYD LTPSLSRQSS QSKKDIEIDV MDECARGIVQ ITQRMDLHLR QAEMDAEQAV
VLGRCAIAEN DEKSQEISML KGQLERSREH HELLQRQLGD AQIELDVVYE AFNTELDGMF
NDAQLPEDEA FQALRNDLQV TKANRNVLQL ENQKLKRELE EANLKRDQWA RILRTQGHIV
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