Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CNF03160 |
Symbol | |
ID | 3258302 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Cryptococcus neoformans var. neoformans JEC21 |
Kingdom | Eukaryota |
Replicon accession | NC_006691 |
Strand | - |
Start bp | 938913 |
End bp | 940785 |
Gene Length | 1873 bp |
Protein Length | 339 aa |
Translation table | |
GC content | 45% |
IMG OID | 638257433 |
Product | glyceraldehyde-3-phosphate dehydrogenase |
Protein accession | XP_571627 |
Protein GI | 58268942 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0057] Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase |
TIGRFAM ID | [TIGR01534] glyceraldehyde-3-phosphate dehydrogenase, type I |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.384535 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | CTCTTTTCTC TTTCTCTTTT CTTCCAACAA TTTAACAAAC TCTTTTGTTC TATCCATTGA ATCCTTCTAG GAGTATACTT GCATAAATAC AATGGTCGTC AAGGTTGGAA TCAACGGTTT CGGTACGTAA TCAATCCTTC TCTTCCCGTT GCTTCATATC CCACCGATGT GACTTCCAAT ATTGTGCGCT GGCTGTTCTT GAGTTATGGT AGCTAATAGC TATGTGATAG GTCGTATTGG TCGAATTGTT CTCAGGTATG CTTTCTTTAA GTCAACGGGG TAAGAAGCCC GTGTATCTAA CGTTCAGGTA GGAACGCCAT CGAGCATGGG GACCTCGAGG TTGTTGCTGT CAACGAGTGA GTGTCCCAAA AGTGTTAATC CATTAGATGA ATCACTTAAT TGTCCATAGC CCTTTTATTG ACTTAGACTA CATGGTATGA TACTTCTTTC CGCCCAATAG CTTCGTACTG ACTCTGTTGC GCAGGTCTAC ATGTTCAAGT ATGACTCCGT AAGTCTCCCA AGTTCTAACG TTCTGTATGG CTTATTAACC TGATTTTCGA CAGACACATG GTCGCTTCAA GGGCTCCGTC GAGGTTAAGG ACGGTAAACT TTACATCAAC AACAAGGCCA TTGCCGTCTT CGGCGAGAAA GACCCTGCCA ACATCAAGTG GGGTGAGGCT GGTGCCGAGT ACGTCGTTGA ATCTACCGGT GTTTTCACGA CTACCGAAAA GGCCGGTGTC CATCTCAAGG GAGGTGCCAA GAAGGTCGTC ATTTCCGCTC CTTCTGCTGA TGCTCCTATG TACGTTGCGA TTTTACCGCT ACTCAAATTA TATGACGTGA TGGCTGATGA CATCATTTAG GTTTGTCTGC GGTGTCAACC TCGATGCCTA CAAACCGGAG TACCAAATCG TGTCCAACGC TTCTTGCACC ACCAACTGTC TCGCTCCCCT TGCCAAGGTC ATCCATGACA ACGTTAGTGA CACTCCCAAG TATTACTATT GAATCGACTG ACGTTTCAAT TGGCATCTTT TTAGTTTACT ATTATCGAGG GCTTGATGAC CACTGTCCAT GCTACTACTG CTACCCAGAA GACCGTCGAC GGTCCTTCCC ACAGTAAGCT TCCTATATCA TGCTATGAAA ACATGAGTTT CTTATTGATT ACATATTGCA GAGGACTGGC GAGGAGGTCG AGGTGCTGCT GCTAACATCA TCCCCTCTTC TACTGGTGCT GCTAAGGTGG GTACACATTA CCGCTGTGTG TCAGAGTCTA ACAATTTTGT AGGCTGTAGG CAAGGTCATT CCTTCCCTCA ATGGCAAGCT TACTGGCATG TCCTTCCGAG TCCCTACCTC TGATGTGTCC GTTGTGGACC TCGTCTGTCG CATTGAGAAA GGTGCCTCTT ATGAAGAAAT CAAGAATGTC ATCAAGAAGG CTTCTGAGAG CCCTGAGTTG AAGGGTATCT TGGGGTGAGT GCATTGCAAG TGCTTTGTCA TGACATATTT AGTAATGGTC CAAATTGGTA GTTACACTGA AGACGCTGTT GTCTCCACTG ATTTCATTGG CTCTACCGAA TCTTCTATCT TCGATGCCCA GGCTGGTATT GCTCTTAATG CCAACTTTGT CAAGCTTGTC AGCTGGGTAT GTTTCATACT TGTTCATGGT TTGCCAACGT TGACTGATGT CTTTTAGTAT GACAATGAGT ATGGTTACTC TAGGCGTGTC TGCGACCTCA TCTCTTACAT TGCTGGTGTT GATGCCAAGG CTCAGTAGAT GGGGTTACAG TAGCAGTAGT AATGGTCTGT TAATCAGAAG TCATACAGGT TAAGAAGGTT TTGTTGATGT GATTATGCAT ATTGTGGATG AATAATGTAC TGG
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Protein sequence | MVVKVGINGF GRIGRIVLRN AIEHGDLEVV AVNDPFIDLD YMVYMFKYDS THGRFKGSVE VKDGKLYINN KAIAVFGEKD PANIKWGEAG AEYVVESTGV FTTTEKAGVH LKGGAKKVVI SAPSADAPMF VCGVNLDAYK PEYQIVSNAS CTTNCLAPLA KVIHDNFTII EGLMTTVHAT TATQKTVDGP SHKDWRGGRG AAANIIPSST GAAKAVGKVI PSLNGKLTGM SFRVPTSDVS VVDLVCRIEK GASYEEIKNV IKKASESPEL KGILGYTEDA VVSTDFIGST ESSIFDAQAG IALNANFVKL VSWYDNEYGY SRRVCDLISY IAGVDAKAQ
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