Gene CNF03160 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCNF03160 
Symbol 
ID3258302 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameCryptococcus neoformans var. neoformans JEC21 
KingdomEukaryota 
Replicon accessionNC_006691 
Strand
Start bp938913 
End bp940785 
Gene Length1873 bp 
Protein Length339 aa 
Translation table 
GC content45% 
IMG OID638257433 
Productglyceraldehyde-3-phosphate dehydrogenase 
Protein accessionXP_571627 
Protein GI58268942 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0057] Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase 
TIGRFAM ID[TIGR01534] glyceraldehyde-3-phosphate dehydrogenase, type I 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.384535 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CTCTTTTCTC TTTCTCTTTT CTTCCAACAA TTTAACAAAC TCTTTTGTTC TATCCATTGA 
ATCCTTCTAG GAGTATACTT GCATAAATAC AATGGTCGTC AAGGTTGGAA TCAACGGTTT
CGGTACGTAA TCAATCCTTC TCTTCCCGTT GCTTCATATC CCACCGATGT GACTTCCAAT
ATTGTGCGCT GGCTGTTCTT GAGTTATGGT AGCTAATAGC TATGTGATAG GTCGTATTGG
TCGAATTGTT CTCAGGTATG CTTTCTTTAA GTCAACGGGG TAAGAAGCCC GTGTATCTAA
CGTTCAGGTA GGAACGCCAT CGAGCATGGG GACCTCGAGG TTGTTGCTGT CAACGAGTGA
GTGTCCCAAA AGTGTTAATC CATTAGATGA ATCACTTAAT TGTCCATAGC CCTTTTATTG
ACTTAGACTA CATGGTATGA TACTTCTTTC CGCCCAATAG CTTCGTACTG ACTCTGTTGC
GCAGGTCTAC ATGTTCAAGT ATGACTCCGT AAGTCTCCCA AGTTCTAACG TTCTGTATGG
CTTATTAACC TGATTTTCGA CAGACACATG GTCGCTTCAA GGGCTCCGTC GAGGTTAAGG
ACGGTAAACT TTACATCAAC AACAAGGCCA TTGCCGTCTT CGGCGAGAAA GACCCTGCCA
ACATCAAGTG GGGTGAGGCT GGTGCCGAGT ACGTCGTTGA ATCTACCGGT GTTTTCACGA
CTACCGAAAA GGCCGGTGTC CATCTCAAGG GAGGTGCCAA GAAGGTCGTC ATTTCCGCTC
CTTCTGCTGA TGCTCCTATG TACGTTGCGA TTTTACCGCT ACTCAAATTA TATGACGTGA
TGGCTGATGA CATCATTTAG GTTTGTCTGC GGTGTCAACC TCGATGCCTA CAAACCGGAG
TACCAAATCG TGTCCAACGC TTCTTGCACC ACCAACTGTC TCGCTCCCCT TGCCAAGGTC
ATCCATGACA ACGTTAGTGA CACTCCCAAG TATTACTATT GAATCGACTG ACGTTTCAAT
TGGCATCTTT TTAGTTTACT ATTATCGAGG GCTTGATGAC CACTGTCCAT GCTACTACTG
CTACCCAGAA GACCGTCGAC GGTCCTTCCC ACAGTAAGCT TCCTATATCA TGCTATGAAA
ACATGAGTTT CTTATTGATT ACATATTGCA GAGGACTGGC GAGGAGGTCG AGGTGCTGCT
GCTAACATCA TCCCCTCTTC TACTGGTGCT GCTAAGGTGG GTACACATTA CCGCTGTGTG
TCAGAGTCTA ACAATTTTGT AGGCTGTAGG CAAGGTCATT CCTTCCCTCA ATGGCAAGCT
TACTGGCATG TCCTTCCGAG TCCCTACCTC TGATGTGTCC GTTGTGGACC TCGTCTGTCG
CATTGAGAAA GGTGCCTCTT ATGAAGAAAT CAAGAATGTC ATCAAGAAGG CTTCTGAGAG
CCCTGAGTTG AAGGGTATCT TGGGGTGAGT GCATTGCAAG TGCTTTGTCA TGACATATTT
AGTAATGGTC CAAATTGGTA GTTACACTGA AGACGCTGTT GTCTCCACTG ATTTCATTGG
CTCTACCGAA TCTTCTATCT TCGATGCCCA GGCTGGTATT GCTCTTAATG CCAACTTTGT
CAAGCTTGTC AGCTGGGTAT GTTTCATACT TGTTCATGGT TTGCCAACGT TGACTGATGT
CTTTTAGTAT GACAATGAGT ATGGTTACTC TAGGCGTGTC TGCGACCTCA TCTCTTACAT
TGCTGGTGTT GATGCCAAGG CTCAGTAGAT GGGGTTACAG TAGCAGTAGT AATGGTCTGT
TAATCAGAAG TCATACAGGT TAAGAAGGTT TTGTTGATGT GATTATGCAT ATTGTGGATG
AATAATGTAC TGG
 
Protein sequence
MVVKVGINGF GRIGRIVLRN AIEHGDLEVV AVNDPFIDLD YMVYMFKYDS THGRFKGSVE 
VKDGKLYINN KAIAVFGEKD PANIKWGEAG AEYVVESTGV FTTTEKAGVH LKGGAKKVVI
SAPSADAPMF VCGVNLDAYK PEYQIVSNAS CTTNCLAPLA KVIHDNFTII EGLMTTVHAT
TATQKTVDGP SHKDWRGGRG AAANIIPSST GAAKAVGKVI PSLNGKLTGM SFRVPTSDVS
VVDLVCRIEK GASYEEIKNV IKKASESPEL KGILGYTEDA VVSTDFIGST ESSIFDAQAG
IALNANFVKL VSWYDNEYGY SRRVCDLISY IAGVDAKAQ