Gene CNF02130 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCNF02130 
Symbol 
ID3258281 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameCryptococcus neoformans var. neoformans JEC21 
KingdomEukaryota 
Replicon accessionNC_006691 
Strand
Start bp622922 
End bp624217 
Gene Length1296 bp 
Protein Length162 aa 
Translation table 
GC content46% 
IMG OID638257339 
Productubiquitin-conjugating enzyme E2-28.4KD, putative 
Protein accessionXP_571537 
Protein GI58268762 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG5078] Ubiquitin-protein ligase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones45 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGAAGT CGCCTCCCCC ATTCATCTGG GCTTGTCCGG AGGAGAAGAA CATATTAGAT 
TGTACGTGTC TTCACCCCTT AAGTCATTAG CGATGATTCT GACGAAAAAG ATGTAGGGCA
CTTTATCATT GTAAGCCGGT CGCTAAATCA ATCATTAAGG TCTGCTCACT CGACGTGACG
TATAGCGTGG ACCCCCTGAC ACTCCGTATG AGGGAGGAGA ATATCATGGT CTTATCTGGT
TCCCTAGTGA CTATCGTGCG TATTTTGCTT TGGTCACTGC TATTAGCGAG AGTTATAGGC
TGATCTAATC TTCCATCAGC TTTCAAACCG CCAGATGTCA AACTCTTCAC ACCTTCTGGG
AGGTTTGAAG TTGGTCACAA AATTTGCATG AGCATGACTT CGTAGTAAGT TGTTAAACCA
TTATTCTCAA ATGTGTCTGA CGGTTTTTGG GTTAGCCATC CTAGCACGTA CGTCGAGGAT
CAATTGTGCT TTGAAAGCGG AGATTAACTT GTTTATGATG ATTGCCGTTT TAGGTGGAAT
GCTGCCTGGT CTGTTGCCAC GATCTTGACT GGTCTCCTGA GTTTCATGCT CAGCAACGAG
TCCGTATTCT CCTGTGAATT TTTCGATGGA GATTTTGTGC TGATATCTTA TCATCAGAAT
AACAGCCGGG GCCGTGAAGT CAACCAATGA AGAGAAAAGG CTTTTAGCCA AGCAGAGTCA
TGCGTTTAAC CTGAAAAGCA AGAAATTTAG AGTACGTTTA TATTTGTATT GGCCTCGGTT
TATTCCCAGT TACTGATTCT TGCGATAGGA GATATTCCCT GATGTAAGTT GACAGCGATG
GCTCCCAGTA TTACCAAATA CGCTATGTAC GTTACTGATA ACTGATTGCC TCGCAGTATG
CCACTCCTGA GATGACTGAC CTTCCTGACA TGGGCGGACC TGCCGCGTCA TCTGTAAGTC
TCTCAGAACC ACTAGTCATC TAAGTCTAAC ATAGGCGACG TTGAGGCGTC CAAAGTCTCA
GAACCAGTGA ATACCTCAGC TGCACCCAAT TCGTCCTCGC CCACCAACAT TCCTGTTGCC
GTTCCTTTGG CCCAGCTTAC ACAAACAACA CATACACCAC ATGCACAAGC TCGACCTGAG
CAACGTGTGC AACGGCACGC TGCAGGGAAT TGGTTATTCA GTTGGCGATG GGTTGTAGCG
GTCGTTGTGC TTGCTATATT GGGCAGACTA TCTTCGTTTG CGGGACTTTG AGAGATGCGT
AAAGTTTTTC CGTATGTTGT ATGCATCAAG TTTCGT
 
Protein sequence
MQKSPPPFIW ACPEEKNILD WHFIIRGPPD TPYEGGEYHG LIWFPSDYPF KPPDVKLFTP 
SGRFEVGHKI CMSMTSYHPS TWNAAWSVAT ILTGLLSFML SNEITAGAVK STNEEKRLLA
KQSHAFNLKS KKFRYATPEM TDLPDMGGPA ASSVSLSEPL VI