Gene CNF01790 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCNF01790 
Symbol 
ID3258058 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameCryptococcus neoformans var. neoformans JEC21 
KingdomEukaryota 
Replicon accessionNC_006691 
Strand
Start bp518243 
End bp519342 
Gene Length1100 bp 
Protein Length178 aa 
Translation table 
GC content53% 
IMG OID638257304 
Product60s ribosomal protein l33-b, putative 
Protein accessionXP_571529 
Protein GI58268746 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG2451] Ribosomal protein L35AE/L33A 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCGTCGC GGGCGGCGTC GCCCCTTTCC GGATGCATCG TCGCGATCGG ACCCGGCGAC 
TGTCTTATCG CCGACCAAAG TGCCACATTC GGCAATTCAG GTTACCACAT AACAATTCTC
CGGGTTTCGC CGTATGCGTT GAGGGTGGAC GTTCGCGTTT TGAAGGAAGG GTTTGACAAG
TTTGGTTCTA CTTCTGCATC CCTCAAAAGA CTAGACAAGA TGGCTTCCCG GTGAGTAGAA
AGCTGTCAGA TCGAAAGGGC ACCGCTGACC AGGTGCATTC CTCCGCTCAA ATTATCATTC
CCGTCGACCA TTTCCGCCTT CCCAAACGAC TATCACCACT TGCTTAAATC TTTCTTCCAA
ACCGGCAACG CAATGTCAAA TAGACTCTAC ATCAAGGGCC GAATCCTCGG GCACAAGCGC
GGAAAGCGAA ACTCCCGACC CAACCAGTCT CTCCTCCAGA TTGAGGGTGT CGACAACAAG
GAGGCCGCTG GCCACTACTT GGGAAAGGTA AGCGGTTTTT CACGGAAGGC ACAGTGTGGT
GTTGTGAGGG CAGAATGGGA TATGAATGGG ACGGGATTCA GGATCGTACA GGGGAGATGA
GGAAACAATG ATGGACGTAG GGCCGAGAAG AGGGAGTAAG CAGAGGGGAT TTTGCCGGAG
GATGAGGATT GCGCCACACT GTGCCCGTCG TCACCGCGTC ATCGATGCTC AATGTAACTA
ACTTGTCGTC CAGCGTGTCG CCTACGTCTA CAAGGCCAAG AGGGAGATCA ACGGTAGCCG
AGTCCGAGTC ATCTGGGGCC GAATCTCTCG ATCTCACGGT AACTCTGGTG CTGTCAAGTC
CAAGTTCCGA ACCAACCTCC CTGCCAAGAC CTTCGGTGCC TCTTGCCGAA TCGTGAGTCG
CGACATTGTT ATGCGGCATC GAATCAAACT AATCATGTTA CAGATGCTCT TCCCCTCCAA
CATCTAAATC TCTCTACCGC ATTCGACCGC ATTCTCCATA TCCTCAAACC CGAGATTGAT
ACGATTGTGA TGTACCATTC CGGGAGATGC AGAGACATCA GCTTGTGTTT GTTTGTTGGG
ATTAAATGCT TTGGGTTGGT
 
Protein sequence
MPSRAASPLS GCIVAIGPGD CLIADQSATF GNSGYHITIL RVSPYALRVD VRVLKEGFDK 
FGSTSASLKR LDKMASRLYI KGRILGHKRG KRNSRPNQSL LQIEGVDNKE AAGHYLGKRV
AYVYKAKREI NGSRVRVIWG RISRSHGNSG AVKSKFRTNL PAKTFGASCR IMLFPSNI