Gene CNF01680 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCNF01680 
Symbol 
ID3258181 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameCryptococcus neoformans var. neoformans JEC21 
KingdomEukaryota 
Replicon accessionNC_006691 
Strand
Start bp495305 
End bp496427 
Gene Length1123 bp 
Protein Length332 aa 
Translation table 
GC content49% 
IMG OID638257293 
Productconserved hypothetical protein 
Protein accessionXP_571306 
Protein GI58268300 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG2123] RNase PH-related exoribonuclease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
AAAAAGGCAA TGTCTATTCC ACTCCCAGCG CTCTCTCCGG CCGAAACATC TTACATCGTC 
ACCTCTCTGG CACATCCCTC ATACCCCACA AGAAACGATG CCCGCCCTCT CTTCGCTTCT
AGGCCCATTC AAATTTCCTA CGGCGTATTT CCGCAAGCAA ATGGTAGCTC TCAGGTCAAG
CTGGGGGAAA CAGAGGTGGT CTGTGGTATA AAGCTGGAGG TTATCGACAT TACTGGACAG
CAAATCAAGG ATCAGGAAAA GTGGAGAACA AAAGTCGAAG TTGATGTGTA GGTTCTTCTG
CGACAGCATA TTGCCTCTTG AAACTAAGTA TAGCTCGTAG AACCCCTCAA GCGTTTCCCA
GTATCTCTGC CCCATCGCTT TCTGCTCTTT CTACCCATTT AACTTCCATT GTCACTTCCC
ATTTCATCCC CTCCATCCCA GCTCTTCCCA TTCTTCCCAA CAAGAAATAT TTTCAACCCC
ATCTCCACCT TACCGTCCTG TCCTCCTCTG GTAACATCCC CTCCGCCCTC ATCCTCGCTG
CTCGTGCAGC TTTTGCTGAC CTCAAAGTTC CTAAAACCAA GGTCATCTCT TGGGCAGGCG
AATCTGGAGA GGATGCCATT GATGGAGTTG ATGTTGGAAG GGGAGACATG AGCGGCATCA
AGGCAGCTAT TGCCACTACC AAAGGAAAAG GAAAAGGGAA AATGATTGCG AGAGGATCTG
AAGACTGGGA TCTGGACATG GAAGATGGAG AAGGTGTTGA GTTTTTGGAG GGAAGAGAAG
CGTTACCTGT GCTTGTGACA TTGAACATGG TACGTTTGTC CAATGTCTAT CTGTAGTTCA
TTGACATATC CCGCGACAGG TGCCCAGTTC TCCCAACATT TTCTTGGATG CTACACCTCA
AGAAGAGTCT GCCTGTCCTA CCCGTATCCA CCTTTTCTTC AAGCCCTCGA GTGCCCACGA
CATTTCAAAG CCCAAACTTT GTGGTTTGCG ATTAGAAGGT CCTGACGGTC TGGATGCTGG
TCGTGTCAGA GGGTTGTTAG AGCAGGGCGC GAGTGTCGCG AGCGAATTGA TCAAAGAAGT
CAACAGAACT ATACCAAGTC TAGACATTTA AGTTTTGCAT AGA
 
Protein sequence
MSIPLPALSP AETSYIVTSL AHPSYPTRND ARPLFASRPI QISYGVFPQA NGSSQVKLGE 
TEVVCGIKLE VIDITGQQIK DQEKWRTKVE VDVTPQAFPS ISAPSLSALS THLTSIVTSH
FIPSIPALPI LPNKKYFQPH LHLTVLSSSG NIPSALILAA RAAFADLKVP KTKVISWAGE
SGEDAIDGVD VGRGDMSGIK AAIATTKGKG KGKMIARGSE DWDLDMEDGE GVEFLEGREA
LPVLVTLNMV PSSPNIFLDA TPQEESACPT RIHLFFKPSS AHDISKPKLC GLRLEGPDGL
DAGRVRGLLE QGASVASELI KEVNRTIPSL DI