Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CNF01680 |
Symbol | |
ID | 3258181 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Cryptococcus neoformans var. neoformans JEC21 |
Kingdom | Eukaryota |
Replicon accession | NC_006691 |
Strand | - |
Start bp | 495305 |
End bp | 496427 |
Gene Length | 1123 bp |
Protein Length | 332 aa |
Translation table | |
GC content | 49% |
IMG OID | 638257293 |
Product | conserved hypothetical protein |
Protein accession | XP_571306 |
Protein GI | 58268300 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG2123] RNase PH-related exoribonuclease |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | AAAAAGGCAA TGTCTATTCC ACTCCCAGCG CTCTCTCCGG CCGAAACATC TTACATCGTC ACCTCTCTGG CACATCCCTC ATACCCCACA AGAAACGATG CCCGCCCTCT CTTCGCTTCT AGGCCCATTC AAATTTCCTA CGGCGTATTT CCGCAAGCAA ATGGTAGCTC TCAGGTCAAG CTGGGGGAAA CAGAGGTGGT CTGTGGTATA AAGCTGGAGG TTATCGACAT TACTGGACAG CAAATCAAGG ATCAGGAAAA GTGGAGAACA AAAGTCGAAG TTGATGTGTA GGTTCTTCTG CGACAGCATA TTGCCTCTTG AAACTAAGTA TAGCTCGTAG AACCCCTCAA GCGTTTCCCA GTATCTCTGC CCCATCGCTT TCTGCTCTTT CTACCCATTT AACTTCCATT GTCACTTCCC ATTTCATCCC CTCCATCCCA GCTCTTCCCA TTCTTCCCAA CAAGAAATAT TTTCAACCCC ATCTCCACCT TACCGTCCTG TCCTCCTCTG GTAACATCCC CTCCGCCCTC ATCCTCGCTG CTCGTGCAGC TTTTGCTGAC CTCAAAGTTC CTAAAACCAA GGTCATCTCT TGGGCAGGCG AATCTGGAGA GGATGCCATT GATGGAGTTG ATGTTGGAAG GGGAGACATG AGCGGCATCA AGGCAGCTAT TGCCACTACC AAAGGAAAAG GAAAAGGGAA AATGATTGCG AGAGGATCTG AAGACTGGGA TCTGGACATG GAAGATGGAG AAGGTGTTGA GTTTTTGGAG GGAAGAGAAG CGTTACCTGT GCTTGTGACA TTGAACATGG TACGTTTGTC CAATGTCTAT CTGTAGTTCA TTGACATATC CCGCGACAGG TGCCCAGTTC TCCCAACATT TTCTTGGATG CTACACCTCA AGAAGAGTCT GCCTGTCCTA CCCGTATCCA CCTTTTCTTC AAGCCCTCGA GTGCCCACGA CATTTCAAAG CCCAAACTTT GTGGTTTGCG ATTAGAAGGT CCTGACGGTC TGGATGCTGG TCGTGTCAGA GGGTTGTTAG AGCAGGGCGC GAGTGTCGCG AGCGAATTGA TCAAAGAAGT CAACAGAACT ATACCAAGTC TAGACATTTA AGTTTTGCAT AGA
|
Protein sequence | MSIPLPALSP AETSYIVTSL AHPSYPTRND ARPLFASRPI QISYGVFPQA NGSSQVKLGE TEVVCGIKLE VIDITGQQIK DQEKWRTKVE VDVTPQAFPS ISAPSLSALS THLTSIVTSH FIPSIPALPI LPNKKYFQPH LHLTVLSSSG NIPSALILAA RAAFADLKVP KTKVISWAGE SGEDAIDGVD VGRGDMSGIK AAIATTKGKG KGKMIARGSE DWDLDMEDGE GVEFLEGREA LPVLVTLNMV PSSPNIFLDA TPQEESACPT RIHLFFKPSS AHDISKPKLC GLRLEGPDGL DAGRVRGLLE QGASVASELI KEVNRTIPSL DI
|
| |