Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CNF01640 |
Symbol | |
ID | 3258069 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Cryptococcus neoformans var. neoformans JEC21 |
Kingdom | Eukaryota |
Replicon accession | NC_006691 |
Strand | - |
Start bp | 482485 |
End bp | 486422 |
Gene Length | 3938 bp |
Protein Length | 834 aa |
Translation table | |
GC content | 47% |
IMG OID | 638257289 |
Product | glucosidase, putative |
Protein accession | XP_571506 |
Protein GI | 58268700 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2273] Beta-glucanase/Beta-glucan synthetase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACATCCT CCAACGAAGC CAGCTGCCCA CGCAGTCGAC AAAACTCAAC AACTTCGCTC AATAACCCTG CTGGCAGCCC ATCTTCTAGG AAAACCTCTC ACTCCCGTAA CGATTCGGAA GTTATTGCTG CTTCTGGAGT CAGACATCCT TCAGCCAACC ATAGGCCCAA CGCTTCCCTA TCAGGATCTC CAGGCCATCT CCGCCCAAGG TCTTCTCGTA CTGCTTCACC CGTTTCAACA CTCTCTCGGA GGAAGTCATC ACCCAACCTC TCAGTACCCC CATCTGGCAG AAACATGTTT GGAGGCGATG GATCCCACAC TTCTGGAGCT GAACGTATCA TCAAGGGTAC AAGCAAATGG TTGAGGGACA AAATGGGTAG CGGCGGGGAA AAGAACGACC ATTGGTTAGT ACTGGATCTT CCTTCGCCAT CGATGCTTAG CGACGCGGGG AGTATGGCCA TACCCGTTTA CGACACTCGA GGATACCCAT CCCGTGAAGG ATCTCTTGAT AGGCCTCCCG CCGAGGCCGA CGCAGGAACT CGTCAACAAG GGCCCGCCCT CACGTCCGGT CCCGAAATCA ACGTATGCCT CTCTCAGTCT ACAAAGAACA AGCCCAGCCC TCTCGGATAT ACACACAATG CAAGTCTCAC GCCCCTTGCA GCTCAGTTTC CAGCTCGTAG TGCATCACCG CTCAACGCAT CGCTACCAAG CTTGGCGGAC TTCTACCCCG ATACAGTCGT TTTTGGCAAT AGGACATTCG GCAGCGACCC AAGGCCGGCT CTGAGTGTTT TTGGCAGCTC GGGATCTTCA ATTATGACCA TTCGAAGCAT TTCCTCATTG AGAAGTGGAT TTGGAACTGA TACAGATAGT GCCGCAAGAT TCAGACTCGA TTCCGACGCG GGCTCAGATG AGGGACTGAT TGACAGAGCG GCGATGCTAA AGAGGCATGC GGCCAAAAGC GCGTATGGTA TGAAGAATAT TCTCCCCAAA TCAAGGCTTG TCAATGAATT GGAAGGGAAT GAAGAAAAAC GAGGCCTGTA TGATTTGGTG AGCTTCTACG ACTTTGCCAA GTCTAAGCGA GTAGTGGTTG GCTCATGCCT TCTCGTAGCT TCCCTTCCAT ATTGATCCCT CCCAGTGGGA AGGGGCGAAC CCCGAGGATG ATGACGAACT GCACAGACCG GAATCACAAG ATGAACTTGA TGTGAGTAAG CCCTATGCCT CTGTTTTGAA GTGATTCTCA TGCGGTTGGT ACGTAGACCC AGTACTTTTC AAGCCGTGGG CTTGCCAACC TGGGCTGCTT GGCAATCATG GGCCTAGCTG TTGTTATCCT TTTGTGAGCG CACTTTTCAG CCCGCATAAC GAATAGCTAA CAGCATATAG CGCCGGCTTG CCTATCTTCG AGTATTACAT TACTCTACCC GCAGACACGC ATGGAGGGTT TAATATAGGA GGTATCAAGT GCGCCCGTTC ATTCGCCCGT CTTGATCGCC GCCACTGACG TTCTCCTTAA GTTCCACGGG GCAAGTGCCT GACGTAGCCA ACATTTTCCA GCTAATTGAT CCCGACACGC CCCCCGAAGC CTATACTCAT AAAAGTTTAG ACACAGGGGA GGAATGGGAC CTCGTTTTCT CAGACGAGTT CAATGAGGAT GGACGAACTT TCTATAATGG TGGGTCAGGT GACACCACTG ATGAGCACTA CTAGACAATA TTAAGCCTTG CCATAGGTGA TGACCCTTTC TGGGAAGCCG CCGACTTACA TTATTGGCAA ACCAATAACT TGGAATGGTG AATGTGACAG ATCATTTGGT GACCAAAAGC TTAATTTCCG CTTGACAGGT ATGACCCCAG TCGATTGACT ACTAAAAATG GAAAACTGGT CATTACCCTT GATGAAATTT TTAGTCATGG CATGAATTTT GAAGGGGGTA GTAAGTCTTG AGACCTTCAT GACATTGACA AACAGAGCTC ATTTTTTTCC CTTTAAAAAG TGATGTCCAG TTGGAATAGG TTTTGCTTTA CAGGTGGTTA TATGGAAGGC AAGTGCTCGT ATGATAATTG GGGCAAGACT TTCTTACGAT TGTCACAGTT TCTGTATCTC TCCCCGGCAC AAATGACATT CCTGGGTATG TTCATTAACC CAAATGCGAC ATGATCGTTG TGATTCTAAT CTGACCCCAT AGTCTCTGGC CCGCTGTTTG GGCTATGGGA AACTTGGGAC GGGCGGGATA TGGAGGATCT CTTGATGGCA CGTGGCCATA TACCTATGAT TCATGCGACG TCGGCACGCT ACCCAATCAG ACGCTCAATG GTAAGGCTGA TTTTCTAATC GTCGAACAGC TCCTTATCAA CGTATTCAGG TAAACCAACA GTAGCGTTGA CTCAAGGTGA TCCGGGCCAT AACAACGAGC TCTCGTACTT GCCTGGACAA CGTCTCTCAA GATGCACCTG CCCTGACGAT GACACTCACC CCGGGCCTAA ACATTCTGAT GGATCTTTTG TAGGGAGATC AGCCCCTGAG ATTGATATAT TTGAGGCTAC TGTAAGCGAT CAGATTCTTC TTGAGGAGAT TATAAGCACT AATATTGTAC AATCCAGCTT GATATGTCGA TTGGCAAGGG TCAAGTGTCG CAGTCCGGAC AATGGGCACC TTTCAACCCA AACTACCACG TGAGCCGAGT TTCTTCCATG ATTGATCCCT TAGACGAAAG AGTTGACCTG ATGGTGTGTT GGGCAGTTCA TCAATTCTTC CAGCAAATAT TACGAAATTT ATGACAATGA TGTTACCCAG ATTAATACCT ATATGGGCAG TGTTTATCAA CAGGCTACGT CTGGCTTGAG TTTGACCAAC CAAGTGAGTT TATGATATCC TTCATATGAG TCTTGACTGC TAATATATCA ATATCAATAG GAATGCTAGT AAATCCTTCG CAGAATACTT GGAATCATCG AAAAATAGGG CACTGACGAT AGATAATAGT ACCGACGAGA CTGGTTGTTT TGCGGTCTAT GGAATGGAAT ATGCTCCCGG AGCGTAGGTC GGCTTGCTAT TGTTACGAGG AATTGCGCTG ATAATAGGCC AGGGATGGTT ATATCACTTG GGTCAACGAC AACAAGAAAG CTTGGACTGT CCGTGGAGCT GGTTAGTCAT GTTTTACAGA ACAATTACTA ACCTTCAAAC ACGGTGATGC GTCCTGTCTG ACTCCTGATA TCATTAGCTA TGGGACCTAA TAAAGAAGCT GGAGTTGATC AACGGCTTGT GACAGAAGAA CCGATGTACA TGGTACTCAA CTTGGGTATC TCAGAGAACT TCGGGGCTGT CCAGTGAGCA AAATTTTAGA CATGAAAACG ATGACTGACA TGGCGATTAG TTTCGTTGGC TTACAAAAGC TATGGCCTGT GCAGTAAGTA TCATTTGCTT TTCTCTCTGA TCCTTCTGCT ACGACTCACC GAAGCTTGAA GAATGGAGGT CGATTATGTT CGAGTATATC GTACGTGACC ATTCATTGGA CTGTCTGTTC CCACACTCAA TGATATGTAG AGGACCCAAA GAAGAAGAAC ATAGGCTGTG ACCCAGCTGA CCGCCCAACG GCGTCATATA TCTCCCGGTA AGCAGGAGCG TATAGAATGC ATCATCTTCT CTGAAGACTA ACTGAAATGA CACAGATTCC CCGAGGCATA CTCGAACGCG AATATTGTGA GCATCACTCT GGTCATAAGT GCAGCTCAGG TTGACATGGC GTCAGACAAC TTTCGATCAA GTTCCGAATA AGAAACGACC TAAGAACAGT TTGGTTGATC AATGCTAACC AGATTTTATT TGTTTCTTTT CACACAATTT TCAGATCATC AGCATCCTCG TATACCCTTT TACATGGTGT AACAGCTTCC AGGACATTTG GACGACCATT ACCGTAGCCA AAAAAATCAT TACAGGTA
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Protein sequence | MTSSNEASCP RSRQNSTTSL NNPAGSPSSR KTSHSRNDSE VIAASGVRHP SANHRPNASL SGSPGHLRPR SSRTASPVST LSRRKSSPNL SVPPSGRNMF GGDGSHTSGA ERIIKGTSKW LRDKMGSGGE KNDHWLVLDL PSPSMLSDAG SMAIPVYDTR GYPSREGSLD RPPAEADAGT RQQGPALTSG PEINVCLSQS TKNKPSPLGY THNASLTPLA AQFPARSASP LNASLPSLAD FYPDTVVFGN RTFGSDPRPA LSVFGSSGSS IMTIRSISSL RSGFGTDTDS AARFRLDSDA GSDEGLIDRA AMLKRHAAKS AYGMKNILPK SRLVNELEGN EEKRGLYDLL PFHIDPSQWE GANPEDDDEL HRPESQDELD TQYFSSRGLA NLGCLAIMGL AVVILFSTGQ VPDVANIFQL IDPDTPPEAY THKSLDTGEE WDLVFSDEFN EDGRTFYNGD DPFWEAADLH YWQTNNLEWY DPSRLTTKNG KLVITLDEIF SHGMNFEGGM MSSWNRFCFT GVSVSLPGTN DIPGLWPAVW AMGNLGRAGY GGSLDGTWPY TYDSCDVGTL PNQTLNGKPT VALTQGDPGH NNELSYLPGQ RLSRCTCPDD DTHPGPKHSD GSFVGRSAPE IDIFEATLDM SIGKGQVSQS GQWAPFNPNY HFINSSSKYY EIYDNDVTQI NTYMGSVYQQ ATSGLSLTNQ VNNSTDETGC FAVYGMEYAP GADGYITWVN DNKKAWTVRG AAMGPNKEAG VDQRLVTEEP MYMVLNLGIS ENFGAVHFVG LQKLWPVHLK NGGRLCSSIS FPEAYSNANI VSITLVISAA QVDMASDNFR SSSE
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