Gene CNF01610 details

Gene Information

• Locus tag: CNF01610
• ID: 3258347
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Cryptococcus neoformans var. neoformans JEC21
• Kingdom: Eukaryota
• Replicon accession: NC_006691
• Strand: +
• Start bp: 471869
• End bp: 478387
• Gene Length: 6519 bp
• Protein Length: 1895 aa
• GC content: 48%
• IMG OID: 638257286
• Product: chitin synthase-related
• Protein accession: XP_571494
• Protein GI: 58268676
• COG category: [Z] Cytoskeleton
• COG ID: [COG5022] Myosin heavy chain

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCACAAC AACCTCCACC ATCGCGCTTC CAGGGCGTCA CTGATCTTTC GTGCGTCTCC 
AAACAACATC TCATTCTTCT CCGCTCAGAC TGACCCATGC ACCAGCTCGC TCGCCGTCAC 
AGAGGATACA GTCCTAGTAA CCCTCCAGGA GCGCTATCTC GCTCATAAAC CATACACTTC 
TCTTTCACCA GCAGCTCTTG TTTTTCTCAG CCCTTATTCC TATCTCCCAA TTGACGGTGA 
AGAGTCGCTA CTGCGCTATG TTGAGGAGTA TTACCAATGC AATAACGAGG AAGGAGGAAG 
CAGGAATGAG CAAGGGTGGT GGAAGAAGAA GCTGGAAGAA CCGCATGTGT TTCAGTTGGC 
GCTGGGCGCA TACTATAATA TGAGAAGGAC CGGGCAAGAT CAGGTGATAA TTGCCAGGTG 
AAGTACTGCG ATGCTGTCGA TTCGGATGTA CCACTAATAC AGTGCAGTGG GCCTACTGGT 
TCTGGCAAGA GTGAATTGAA GAGATTGGCT ATCGAAGCTA TCACTCAGGT CAGCCTCGCC 
AACCCTGGGA AAAAAGGGTC AAAAATAGGA CTACAGGTCT CGAGCGCCGA GGTATGTCCT 
ACAGATCATT TCACCTGCAC GAGCTCACGA AGACAAAGTT CATCCTCAAA TGCTTTGGAA 
ATGCCCATAC TCTGTCCAAC GACGAGGCGT CGCGTTTCGG CACCTATACC GAATTACAAT 
TCAACGAAAG AGGTCGTTTG GAGGGCTTGA AGACGATCGT TTACTACTTT GAACGTTCTC 
GTGTATCTCA AGTTCCAATC AACGGCGAGC GCAACTTTCA TGCCTTCTAC TATCTTGTCT 
CTGGTGCACC GGAAGAGGAG CGGAACTTCC TGAAGCTTGG CGATGTTTCA GACTATCGTT 
ATCTCAACTG TCGAGTTCGA CGTGTAGGCG TGGACGATCG CCACCGTTAT AGCCAACTCA 
GGCAAGCGTT CAAGATGATC GGGATTTCAA GCCGGCTCAT AGCCCAAATC TTCCAGCTTC 
TGGCGTCCAT TCTTCACATA GGTAACCTCC GGTTCTCGCC CAGCGATGGT ATACAGGAAG 
GTGCATCTGT TATCAACATC GACACTCTTG ATACCGTGGC CGAATTTTTG GGTGTTCATT 
CTGAAAGCCT TGCCGAGATA TTCTCTCTTA AAACCATCCT CGTCAGAAAG GAAGTTTGCA 
CTACGTTCCT TGGGCCGGAA CAAGCAGAAC AAGTCCGAGA CGAGCTTGCA CGAACGCTCT 
ATTCATTACT CTTCTCGTGG CTTAATGAGC ATATCAATAC AAGGCTATGT AAAGACAGCT 
TCGGATCCTT TATCGCATTG GTCGACCTCC CTGGCATCCA GCGTAACTCT GGATCTATGG 
GGTCTCTCAA CTCAGTGGAT CAATTTTGTC TCAATTTTGC CGCTGAAAAA ATGCACAACT 
GGGTATTGCA CAGGATACAC GAGACGACAA GGCAGGAAGC AGAGGCTGAG AGGCTGCTAA 
TATCTCGAGT GCCATATTTT GACAATTCAG AGTGCCTTGG GATGCTGTCC AACCCTCGAG 
GCGGATTGAT AAGTGTTATT GACGACTTGT CACAGAAGAA GCGCTCGGAG AGTAACTTAC 
TTGAAAGCCT CGGCAAGAGG TTCCACAACC ATCCTTCTAT GTCCATCTCC CCTCAAGGAA 
ATCGGTCTTC AGCATCATTC ACCATCAATC ACTATGACGG TCCTGTCACA TACTCTACAT 
CCAACTTCCT CGAACGCAAC GCCAACGAGA CAAGCACTGA CATCATCCAA CTCCTCCGCG 
GCGACACTAC CTCACGATCT CAGGTCTCCA CTACTGAAGG GCATGGCTCA AGTAACCCGT 
TCATCAAGGG CTTATTTGGG ATGAAAAACA TCGCCATGCA AACTCACCCT AGAAGCGACT 
CTACCATCGT TGCCGCTCAA CAATCTGTAC GACCTGTCCG AGCACCGTCA ACCCGACGTA 
AGAAGATGAT GTCACTTGTA CCTGTCTCTG AGGAAGGAGG CGAAGAAGCT AGCGACTTCC 
AAGTAGGAGG TGGTAATGAT GAATCTTCTC CGAAGGAACT GCATTGCATT GCCGGTCAAC 
ACTGGGCCGC AGTTGATTCG TTGTTGAAAT CGTTTGACCA AACTCAGACT TGGTACATAT 
TCGCTCTCAG GCCCAACGAC AGTCAGTTAC CATTTCAGTT TGACTTGCGA AGTATGAAAC 
AACAAGTTAG AAGCTTTGGA TTAGTGGAGA TGGCGCAACA GCTTCAGACG TCTTGGGAAG 
TGAGGTTACC ACATAAGGAG GCTTGCGAAA GGTACAACGA AGAGTTAGTG TACCGAGGGA 
TACCAGAGGG AACAGGCGAC GTTGAGAGAC TAAGGGATCT AAAGCGACTG ATGAGTTTGA 
ATGATGCAGA TATGGGTATT GGACTCCAGC GAGTGAGTCA ACAATAGCCG CCTATTACCA 
CATGGGCTGA TAATAAATCA GGTATTCCTT TCGAACAATC TCTTTCATTT CCTGGAGGAC 
CGACTACGGG CCAAAGAGCC CGGAGAACAA CATGCCTACG AGGATCTTGG CCACAGAAAG 
CTGCAAACCG ATCCGTTCTC CCCCCATCGC TACCAGCCTG CAACTTTCGA CTCACAAGAA 
CATGTGTATA GAGATCCTTC TATCCGCCCT GTGGACTCAT CTTCAAACTT GCCGCTCATG 
GAACACGCTC GGCCCATCGT CAACAATTCA CTTGAAATTG ACGACCATGA GAGCTCTCCC 
GTGCCATACA TAAGTTATGG AGGAAGATCA ATCACCGATA TCGAAGGATA CGCTTCTTCT 
CGTGATCTCT TGGCGAGCTC CATCCACAAG AGCGAAAAGG ACCCCCTAGA TACCGAGCCT 
CAGGCGGGAG AGACCACTGA AGTGTACCGC GAGTCTATTG CAAGGCGTCG ATGGGTTTGG 
CTTTGTTCTA TCCTCACATG GTGGATACCT GGCTTTGTGC TATCCAAAAT TGCCGGAATG 
AAGAGACAGG ATATCCGACA AGCATGGAGG GAAAAGCTCG CCATCAACAT GATCATCTGG 
TTCATCTGCG GATGCGCCAT CTTTGTCATT GCGATTCTTG GTCCTATCAT ATGTCCCACT 
CAACATGTCT ACAGTGCGAG CGAGCTGGCT AGTCACAGTT ACACGTTAGA CCCTAACAAT 
GCTTTTGTGG CAATCCGCGG CGAGGTGTTT GACTTGTCTC AGTTTGCACC GACTCATCTC 
ACAGCAGTAT CGGTCGTTCC CACCAAAAGC ATTATGCAGT ACGGTGGCTT GGACGCGAGC 
GAGCTCTTTC CCGTCCAAGT CTCGGCGCTT TGTGGAGGTG TTTCTGGTTC CATCAGCCAG 
TATGTCACCC TTGACAGCAC CAACACCACC GACGTTTACT CGCAGTATCA CGATTTCCGC 
GCTTACACCA ATGACTCTCG ACCGGATTGG TACGCTGAGA TGATGATCAT GATGCGTCAC 
CGATTCCGCG TTGGATTCAT GGGCTACACA AAGAAGGACT TGAAAACAAT GGCTGCGCAG 
GGCAAAGCGG TCGCCATATA TGACAATTTA GTATACGACA TGTCGAATTA TATCCGGCAA 
AATGGCGGAG GGCTGAGGGC ACCCGATGGG GTCAATCTTA CCGCCCAAGA CCAAGCTGAT 
CGTCAGTTCA TGAGCGACCA AGTCGTATCA TTGTTCAAGT ACAATTCTGG CAAGGACATC 
ACTACCCTTC TGGACAACCT TGGCTCAACA ATTGGCACAG ATGTCGTCGA CAGACAGAAA 
ACGTGTCTAC GCAATCTGTT CATCCTCGGT AAACTCGACA CCCGAGATTC TGCCCAATGT 
CAGTTCTCGA CCTACATCCT TCTCGCACTG AGCTGTGTCA TGGTGGCAGT TATTGGATTC 
AAGTTTCTAT CTGCTTTGCA CTTTGGCTCT GTTCGTGCAC CGGAATCCCA CGACAAGTTT 
GTCATTTGTC AAGTACCTTG TTATACCGAA GGCGAAGAGT CTCTTCGACG TACTATTGAC 
TCGCTCTGCA AGCTCAGGTA CGATGATAAA CGTAAACTTA TTCTCGTCAT CTGCGATGGT 
AACATCAAAG GTTTCGGTAA TGACAAACCC ACCCCTGCTA TCGTGCTTGA TATTCTTGGT 
GTTGACGTTA ACAACGACCC AGAGCCATTG AGTTTCCAAT CGCTTGGCGA GGGCGCAAAG 
CAGCATAATA TGGGTAAAGT CTATGCGGGG TTGTACGAAT GTGCCGGGCA TGTTGTACCG 
TACCTGGTGA TCGCCAAGGT CGGCAAACCG AATGAGAGGC AGAAGCCTGG TAACAGAGGT 
AAACGAGATT CACAAATGCT CGTGATGCAC TTTTTAAACA AGGTGCGCTT TCCCCAACTA 
ACATTTGGAG TCGAGCTGAG AGTATCTAGG TTCACTTCAG CGCACCGATG AATCCTCTGG 
AACTTGAAAT GTATCACCAG ATCAAGAACG TAATTGGTGT CAATCCCAGT TTCTACGAGT 
ACCTATTCAT GGTCGACGCT GATACGACTG TCGATGAAAT GTCATTGAAC CGTCTTGTTT 
CTGCGTGAGT GCATGTTTGT GATGCCTGCT AGTTCTGACT AATGGAAACG GCCACTAGAA 
TGAGGCACGA CAAGAAGATT ATCGGTGTAT GCGGAGAGAC GTCCATTGCG AACGCCAAGC 
AGTCTATTGT GACAATGTCC CAAGTAAGGT ATCATTTATC AACCCGGGTC CATTCACCTA 
ACACATCCCA CAGGTCTACG AATATTTCAT CTCACATCAC CTCTCCAAAG CGTTTGAAAG 
TCTCTTTGGT TCCATCACTT GTCTGCCCGG TTGTTTCTCC ATGTACCGAC TCCGTTCGCC 
AGACACGAAC AAGCCATTAT TTATCTCCCA TGGTATCATC CAAGACTACT CTGAGAATCG 
GGTCGACACG TTGCATCTCA AGAACCTCCT CCACTTGGGT GAGGATAGAT ACCTGACTAC 
CCTGGTTCTC AAGCATTTCC AAGATTACAA GACCAAGTTT GTGCGACATG CGTATGCCAA 
GACTGTGGCT CCTGATTCAA TCAAGGTTTT ATTGAGTCAA AGGCGTCGAT GGATCAATTC 
CACTGTTCAT AATCTTGCTG AACTTGTCTT TTTGGATCAA TTATGTGGAT TCTGTTGTTT 
CTCGATGAGG TTTGTGGTCT TTATTGACTT GTTGTCAACA ATCATTGCAC CTGTCACTGT 
TGCCTATGTG AGTCTCATGC TTCATTAGAT CTACGTGAAT AAACTGACAA GAGTGAAGAT 
CGTGTACTTG ATTTATCTAA TCGTACACGA TGGCTCGTCA ATCCCTACTC TGAGTATCGT 
CATGCTCGCG GCCATCTACG GTCTACAAGC GATGATCTTC ATCTTCCGTA TGCGATGGGA 
TATGATTGCT TGGATGATCT GTGAGTAGCC CATCTTTCCT AGACAATGAG CACTACTGAT 
AAGTTTCAAA GTCTATATCT GCGCCATTCC CGTTTTCTCA TTCTTGCTGC CGCTGTATTC 
TTTCTGGAAA ATGGACGACT TCAGTTGGGG TTCTACCAGG CTGGGTGAGT CGTTTGGCTT 
TGTAAATTTA GAACCAGAAT TGACAACCAT TTGCGTAGTC GTCGGTGATA AGGGCAAAAA 
AATTGTCATC CATGTAAGCC TTTTGCAGTC TCACGACGTT ACAAGATGGA CATCTCAGCT 
GACGCTCTCG TCAGGATGAA GGTAAATTCG ACCCGTCTTC TATTCCGTTG AGAAGCTGGG 
AAGAATATGA GTGAGTTCAT TACCATCTAT TAGGCAAGAA GGTAGTTGTT GCTGACCCTG 
CAAAGGAATG AACTCTGGGA CCAAGAATCT GTTCACTCTG GATCGTACAT GCCACCAAAG 
GCCGAATATT CGTACGACTA CCCGCGCGCC CAATCGACGT ATAGCTACGG CGGTCATGGT 
TATGAGCAAC CGGTCCACCC TGTGCAGACA CGGAGCACGT CTCCTGTCAG TTCGCGTTAT 
CAGATGAGCC AGTTCCGCCA AAGCCCTTAT CAGAGTCCCT ATCAAGGGCC ATACGGTGGA 
AGTGCGGTGG ATTTCAGGCC TAGCCGTATG GATATGGCAC ATCAACCCTC GTTGGACGAT 
ACATCATCCT TCCACCAGCC ATATCAACCT CCTCCACGAC CTCAAAGCTC CTACGCATTC 
AATCTCCCCG ACCCTTCTTC AGACTCCTTC ACCGCTCCCG CAGTCGATTA CCTCGGTGCG 
CAAGCGATAA CAGATAGTCA GCTGGAGAGA TCGATAAGAA AGATATGTGC GAATGCAGAG 
CTGGACAAGT TGACGAAGAA GGGAGTGAGA AAAGAGCTGG AAAGGGAGTA TGGTGTTGAG 
TTGACTGAGA GGAGGGAGAC CATCAATAGA TTGGTCGAGA AAGTTTTGAC AGAGTAGCCG 
GAAAAGAGCC GTCGTAGTGT ATTGAGGGAG CGGTTAGCTT CGTCGAAGAG TGAGGTGACG 
TTCCGAGGTG TGGCTTGATT GCATATGATA TATGTTGTA 

 

Protein sequence

MAQQPPPSRF QGVTDLSPYS YLPIDGEESL LRYVEEYYQC NNEEGGSRNE QGWWKKKLEE 
PHVFQLALGA YYNMRRTGQD QVIIASGPTG SGKSELKRLA IEAITQVSLA NPGKKGSKIG 
LQVSSAEFIL KCFGNAHTLS NDEASRFGTY TELQFNERGR LEGLKTIVYY FERSRVSQVP 
INGERNFHAF YYLVSGAPEE ERNFLKLGDV SDYRYLNCRV RRVGVDDRHR YSQLRQAFKM 
IGISSRLIAQ IFQLLASILH IGNLRFSPSD GIQEGASVIN IDTLDTVAEF LGVHSESLAE 
IFSLKTILVR KEVCTTFLGP EQAEQVRDEL ARTLYSLLFS WLNEHINTRL CKDSFGSFIA 
LVDLPGIQRN SGSMGSLNSV DQFCLNFAAE KMHNWVLHRI HETTRQEAEA ERLLISRVPY 
FDNSECLGML SNPRGGLISV IDDLSQKKRS ESNLLESLGK RFHNHPSMSI SPQGNRSSAS 
FTINHYDGPV TYSTSNFLER NANETSTDII QLLRGDTTSR SQVSTTEGHG SSNPFIKGLF 
GMKNIAMQTH PRSDSTIVAA QQSVRPVRAP STRRKKMMSL VPVSEEGGEE ASDFQVGGGN 
DESSPKELHC IAGQHWAAVD SLLKSFDQTQ TWYIFALRPN DSQLPFQFDL RSMKQQVRSF 
GLVEMAQQLQ TSWEVRLPHK EACERYNEEL VYRGIPEGTG DVERLRDLKR LMSLNDADMG 
IGLQRVFLSN NLFHFLEDRL RAKEPGEQHA YEDLGHRKLQ TDPFSPHRYQ PATFDSQEHV 
YRDPSIRPVD SSSNLPLMEH ARPIVNNSLE IDDHESSPVP YISYGGRSIT DIEGYASSRD 
LLASSIHKSE KDPLDTEPQA GETTEVYRES IARRRWVWLC SILTWWIPGF VLSKIAGMKR 
QDIRQAWREK LAINMIIWFI CGCAIFVIAI LGPIICPTQH VYSASELASH SYTLDPNNAF 
VAIRGEVFDL SQFAPTHLTA VSVVPTKSIM QYGGLDASEL FPVQVSALCG GVSGSISQYV 
TLDSTNTTDV YSQYHDFRAY TNDSRPDWYA EMMIMMRHRF RVGFMGYTKK DLKTMAAQGK 
AVAIYDNLVY DMSNYIRQNG GGLRAPDGVN LTAQDQADRQ FMSDQVVSLF KYNSGKDITT 
LLDNLGSTIG TDVVDRQKTC LRNLFILGKL DTRDSAQCQF STYILLALSC VMVAVIGFKF 
LSALHFGSVR APESHDKFVI CQVPCYTEGE ESLRRTIDSL CKLRYDDKRK LILVICDGNI 
KGFGNDKPTP AIVLDILGVD VNNDPEPLSF QSLGEGAKQH NMGKVYAGLY ECAGHVVPYL 
VIAKVGKPNE RQKPGNRGKR DSQMLVMHFL NKVHFSAPMN PLELEMYHQI KNVIGVNPSF 
YEYLFMVDAD TTVDEMSLNR LVSAMRHDKK IIGVCGETSI ANAKQSIVTM SQVYEYFISH 
HLSKAFESLF GSITCLPGCF SMYRLRSPDT NKPLFISHGI IQDYSENRVD TLHLKNLLHL 
GEDRYLTTLV LKHFQDYKTK FVRHAYAKTV APDSIKVLLS QRRRWINSTV HNLAELVFLD 
QLCGFCCFSM RFVVFIDLLS TIIAPVTVAY IVYLIYLIVH DGSSIPTLSI VMLAAIYGLQ 
AMIFIFRMRW DMIAWMIFYI CAIPVFSFLL PLYSFWKMDD FSWGSTRLVV GDKGKKIVIH 
DEGKFDPSSI PLRSWEEYEN ELWDQESVHS GSYMPPKAEY SYDYPRAQST YSYGGHGYEQ 
PVHPVQTRST SPVSSRYQMS QFRQSPYQSP YQGPYGGSAV DFRPSRMDMA HQPSLDDTSS 
FHQPYQPPPR PQSSYAFNLP DPSSDSFTAP AVDYLGAQAI TDSQLERSIR KICANAELDK 
LTKKGVRKEL EREYGVELTE RRETINRLVE KVLTE