Gene CNF01460 details

Gene Information

• Locus tag: CNF01460
• ID: 3258168
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Cryptococcus neoformans var. neoformans JEC21
• Kingdom: Eukaryota
• Replicon accession: NC_006691
• Strand: +
• Start bp: 429190
• End bp: 431425
• Gene Length: 2236 bp
• Protein Length: 548 aa
• GC content: 46%
• IMG OID: 638257271
• Product: allantoate transporter, putative
• Protein accession: XP_571481
• Protein GI: 58268650
• COG category: [G] Carbohydrate transport and metabolism
• COG ID: [COG2271] Sugar phosphate permease

Plasmid Coverage information

• Num covering plasmid clones: 21
• Plasmid unclonability p-value: 0.44811
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

CCCTTGAGCT TCAATGTCGC AGGATTACAA AGCAGACGAA AAAGAGGTGA TTTCGCATTT 
CGAACATGTG GATACACAAA AGGAAGATCT AGAGGATGGA CACAAGAGGC GAAAAGTCAA 
TAACCAACTC GATGAGGCAG CCAAAATCTT AGAAGAGAGG GGGGAGATAG AATACACCAT 
AGAGGACAGC AAAAGAGTGC TTCGTAAGAT CGACATTTAT GTGTGCATCG TAAGTATCAT 
TTGTCTCGAC GGCCTGCACC TTCAGTGACT GACAACATAC TTTTTCTTTC AATTTCAGCC 
TATGTGCATG GTATGTATAC ATTCGAACTG CTCCATGTAC CTCCTGGGGA AGCTGACATA 
TGGCAGGTCT ACATGTTGCA GCAGTTGGAC AAGATGACTA TTAGCCAGGC TGCTGTCTTT 
AACCTACAAG AGGAGACCAA CCTTCAAGGT AGTGAATATT CGTGGCTTAC CTCTTGTGTT 
TACGTGGCAC AACTTATATT TCAACCTTTA TCCTCCTATG CACTGGTAGT CTTCCCAGGT 
GAGACTTGCC GGGGACTTCC ATGGAGCCAA ATAAGGCTAA CTACAAGACT GCGCAGTAAA 
ATATTGGGTC ATGTTCAACT TCATCTCATG GTCTATCGTA ACCATATGTA CCACCGCCGC 
CACCAACTTT ACCGGTTTGC TCATTGCTCG TATTCTTCTG GGAGCGTTCG AAGCGACCAT 
CTTGCCATCA TTCGTTTTCA TCAGTGGGTT CGAATACAAA CTGTTCCGGA TAAGTACTAA 
TGGTGATATT CTAGCTCAAA TGTGGTGGAC TCGACGAGAA CAGTCTTACA GGACTGTCGC 
CTGGCAAATT GCAAATTCAT GTGCCGCCAT TTTTGGTCCT TTGCTGGCCT TTGGTGTTGG 
TCACGTCAGT TCCGGTATCA AACCCTATCA AGGAATCTTT CTGTGTATGG GTGCCATTTC 
GCTTGCATGT TCACCTATTG TAAGAATCAG TCTTGAGTAT CTTTGACGAC CGCACGCTGA 
GCAGGCTGCT AGGTGTGGTG GCTTCTTCCC AGCTCTCCTA CTACCGCTCG CTTCCTCCGT 
AAAGGGGATG ACCGTCATAT TGCCTTGGAC CGCCTTCGAG AGAATCAAAT GGGTACTAAA 
TCCTCAAAGT GGAAATGGAA CCAGGTGTGG GAGACTTATC GAGATCCCAA AACCTACATG 
TGGGCTGCCA TGTATTTTTG CACTGCTACT CCCTCCGGAG GAATTGGAGC TTTTAATGGG 
TTAATCCTTA AAGGATTTAA TTTCAGCTCT TTTCAGGTGA GTCGATTACC TAGTCGAGAA 
ATCATTCAAG GAGCTCACAT ACTGAGCAGA CGACATTGAT GTCTATTCCA ACTGGGGCTA 
TTGGCATTGT CACCCTTCTC ATCGGTATCT GGCTCACAAA CCGATACAAG ACGCGTTGGG 
CCGTGTTGGT GATTATCACC CTTTTCCCTA TCGGTGGTAT CGCAGCGTTG TGTAATGTGC 
CTAGAGATAA TACTGGGGGT CTGATGGCGT CCTTTTACAT TGCATACCCT CTTGCGGGTA 
TTCGTGAGTG GATGAATGTT ACAGGTCTTA CATGTGCTGA TGACCCCCGC AGAACCTTTG 
TTGTACAGTT GGGCTGGTCT GAATGCAGCC GGAACGACAA AACGTGTGGT GGTATTCGCA 
ACAATGTTTG TCTTCCAGTG CGCTGGCAAT GTGAGTAGGG TGGATGATCC ATTGGTACGA 
GAGGGTCTTA CAACAGAATT AGATTGTAGG ACCACAGTTA TACTTGAAGG AAGAAGAGCC 
TTACTACCAC ACTGGGCTTT ACTCAAACCT TGGATTCTAC GCCGCTCTGG TTGTTCTCAT 
GGTCTCCATG TCGTTCTACC TGCGATACCT TAACAAGCGT CAAGCCAAAC GCCGTGCAGC 
CCTTGGTCTT CCAGAGGAGC TGGAAGACAT GTCAATCATG ACTACTGAGG AAGCACAACG 
ATACAAGGTC AAGTTAGCTC AGCGGATGAA GGAGCATGGT TTGGATGAGG CGAAGCTGTA 
CGAGAACGCG TTTGACGATA TGACAGATAT GGAGTAAGTT GCTTTTCGTG CCTGAGGAAT 
TGGAACTAAC CATGATGTTA GGAATCCGGC ATTCATCTAT GTATTGTAAA CTAGAAGATT 
TGAACTTAGA AGCAACTTTT GATGATAATC TTCAGAGTAG AAAGTTGATC TTAGAAGCGG 
CCTCCTTCGT ACCGCT 

 

Protein sequence

MSQDYKADEK EVISHFEHVD TQKEDLEDGH KRRKVNNQLD EAAKILEERG EIEYTIEDSK 
RVLRKIDIYV CIPMCMVYML QQLDKMTISQ AAVFNLQEET NLQGSEYSWL TSCVYVAQLI 
FQPLSSYALV VFPVKYWVMF NFISWSIVTI CTTAATNFTG LLIARILLGA FEATILPSFV 
FITQMWWTRR EQSYRTVAWQ IANSCAAIFG PLLAFGVGHV SSGIKPYQGI FLCMGAISLA 
CSPIVWWLLP SSPTTARFLR KGDDRHIALD RLRENQMGTK SSKWKWNQVW ETYRDPKTYM 
WAAMYFCTAT PSGGIGAFNG LILKGFNFSS FQTTLMSIPT GAIGIVTLLI GIWLTNRYKT 
RWAVLVIITL FPIGGIAALC NVPRDNTGGL MASFYIAYPL AGIQPLLYSW AGLNAAGTTK 
RVVVFATMFV FQCAGNIVGP QLYLKEEEPY YHTGLYSNLG FYAALVVLMV SMSFYLRYLN 
KRQAKRRAAL GLPEELEDMS IMTTEEAQRY KVKLAQRMKE HGLDEAKLYE NAFDDMTDME 
NPAFIYVL