Gene CNF01420 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCNF01420 
Symbol 
ID3258420 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameCryptococcus neoformans var. neoformans JEC21 
KingdomEukaryota 
Replicon accessionNC_006691 
Strand
Start bp415167 
End bp416440 
Gene Length1274 bp 
Protein Length323 aa 
Translation table 
GC content48% 
IMG OID638257267 
Productconserved hypothetical protein 
Protein accessionXP_571582 
Protein GI58268852 
COG category[I] Lipid transport and metabolism 
COG ID[COG0657] Esterase/lipase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.538282 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTTGTT CCTCAGCAGC ATATCTAAAT CAGAGAAACA ATCACTGCAC AATGGGCGTC 
TTCAAGACTA TTACTTTCGC GCAACACGAT GGTGTAGATA TCGATCTCGA TTACATGCTG
CCCCAGTCAC CTAGTTCAGA TAGCAAACTT CCCATCCTCT TATGGTTTCA CGGTGGAGGG
CTACTGCAAG GCACCCGTAC TTGTGAGTGG TGTTGTGCGG CGAAATACCG ACGGCCTTCA
TTGATTATCA CATATAGGTG CCTGGGCGCA TTTAGTGAGC GCTGTAGAGA AATACAAGCT
CTGCCTCGTT TCTGCCGACT ACAGGCTGGC ACCTCAAACT CGTATGCCAG GCATCATGGC
GGACATCAAG GCTGCTATGG ATTATTTGCG ATCCCCCGAG TTCCTTTCCG AGACAGGGAA
TGCGGTTGAT CAGAACAAGA TCATCGTATC AGGTGGTTCT GCTGGTGGAT GGCTTGCTTT
GCTCATCGGG AGTGGGGTTG GCTTCGAAGC CTGTGGTCTT ACGCCTCCCG CCAAGCCACT
CGGCGTTGTG CCTCTCTATC CTATCACCGA CATCGAAGAC TCATTCTTCA CTACCAAGCA
ACATCGTGAG TTGGTGGTTA TGTTGTCATT GCAAGAGTAG CGTTAATAGG AAATTAGCTG
TATCCTACAT TAAGGAGATG ATCCCGAAGT CGGCAGTAGC AGCTTACCTC GATCCTAAGA
CCCCCCAATC CAGTGGTTGT CCTCTCACTA GCCCTAGAAT GAAATGTTAC CCTTATATGG
TATGTTCTCT CATTCTGTGT CAATATTTCT CCTAAAGAAA ATGCCCCTTT TAGGTTCAGG
AGGCGCTTGA ACAGGAACTC CTTCTTGACG GTACTGAGAT CCCACCTAGT GCATTCAGCA
TAGCCCCAGC GATTGCATCT GGTAAATTCA CTTTACCTCC TACGTACATC ATCCACGGCA
CGTAAGTCAA CCAATAAAGG ACGTGTGCGT TGCTAAGTCC TGGCAGTATC GATGATAAAG
TGCCCATCAG ACAATCTGAG GACGTCTTCA AAGCGTGCAA GCAGCAGAAT ATTGATGTCA
CCTTCGAAGT TCTTGAGGGC GTTGACCACC TCTTCGATAT GGACCCCAAA TATACGCTCG
ACGAAGCGTA CGCATTTATC ACTAAGTTGG TACAATAATA CAAAGTTTTG CTATCGTATC
AATGTACCAC AAGTGGCTTA TGCGCACCCA TATGCAAAGA CTACCCTCAG AATGACTAGA
CATGTTTGTC GTTG
 
Protein sequence
MTCSSAAYLN QRNNHCTMGV FKTITFAQHD GVDIDLDYML PQSPSSDSKL PILLWFHGGG 
LLQGTRTCAW AHLVSAVEKY KLCLVSADYR LAPQTRMPGI MADIKAAMDY LRSPEFLSET
GNAVDQNKII VSGGSAGGWL ALLIGSGVGF EACGLTPPAK PLGVVPLYPI TDIEDSFFTT
KQHPVSYIKE MIPKSAVAAY LDPKTPQSSG CPLTSPRMKC YPYMVQEALE QELLLDGTEI
PPSAFSIAPA IASGKFTLPP TYIIHGTIDD KVPIRQSEDV FKACKQQNID VTFEVLEGVD
HLFDMDPKYT LDEAYAFITK LVQ