Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CNF01330 |
Symbol | |
ID | 3258279 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Cryptococcus neoformans var. neoformans JEC21 |
Kingdom | Eukaryota |
Replicon accession | NC_006691 |
Strand | - |
Start bp | 394009 |
End bp | 394766 |
Gene Length | 758 bp |
Protein Length | 191 aa |
Translation table | |
GC content | 49% |
IMG OID | 638257257 |
Product | transcription-related protein, putative |
Protein accession | XP_571559 |
Protein GI | 58268806 |
COG category | [S] Function unknown |
COG ID | [COG5133] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 0.327512 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCCCGCC AGCTCGACAA CGTCAACCCC ACCATTTTTG CGCCATCAGC TCCCAGTTTC GTCCGAAGAT CGACAGGAAA ATCGGCCAAA TCGAGCTTAT GGGCTCCCGA AGCTTTGTCA GATGATGGGG AGGACTACTA CTCCCCAGGA GCGAGAAGTA GCGGTAGTGT CAGTGACGAG GAGGAAGGAA GGGAAGATAT TGATGCGCAG GAGGTTTATG GTGGGTCGTT TTACTGCTTG GTGCTGAGAA ACGAGTGGCA TATTCCGCTT GCCACCGTTT CCAAGTCTTT TTGTCACCAT GACTGACAGT TCCACAGACC TTCTGCGGTC AATAACCGAC CCTGAACATC CAGTATCTTT GGAGCAGCTT CGAGTGGTAA ACCCTGAGGA TATTCATGTT GCTGGAAATC GTGTGTTGGT GTATCTTACA CCTACAATCC CACATTGCTC CATGTCCACC CTCATTGGTA AGCTGAAAAC CATGTCGAAG TTTAAGAGTG GGAACTGATC ATGTAATAGG GCTATCATTG AGAGTGCGAT TATTGAGGGC TTTGCCTCCA CGATATCGGG TGGATATTCG AATCAAATCG GGAACTCACC AATCCGAGCA CGCAGTCAAC AAACAGTTAA ACGACAAGGA ACGAGTACAA GCGGCTTTGG AGAACAAGCA TCTGTTGAGT GTGGTGGAAG GCTGTTTGGC GACTGCTGGA AAGCGTGGCG AATAGGCTAG GTATATTGTA TCAGATCAAA AGTGTATT
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Protein sequence | MSRQLDNVNP TIFAPSAPSF VRRSTGKSAK SSLWAPEALS DDGEDYYSPG ARSSGSVSDE EEGREDIDAQ EVYDLLRSIT DPEHPVSLEQ LRVVNPEDIH VAGNRVLVYL TPTIPHCSMS TLIGLSLRVR LLRALPPRYR VDIRIKSGTH QSEHAVNKQL NDKERVQAAL ENKHLLSVVE GCLATAGKRG E
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