Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CNF01270 |
Symbol | |
ID | 3258240 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Cryptococcus neoformans var. neoformans JEC21 |
Kingdom | Eukaryota |
Replicon accession | NC_006691 |
Strand | - |
Start bp | 379644 |
End bp | 383385 |
Gene Length | 3742 bp |
Protein Length | 920 aa |
Translation table | |
GC content | 48% |
IMG OID | 638257251 |
Product | conserved hypothetical protein |
Protein accession | XP_571272 |
Protein GI | 58268232 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG5078] Ubiquitin-protein ligase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | CTATAACCCA CGCATTTCGA TTTCAGCAGC TAGTCATCCG CATTCCACCA ATCATGCCCC TTCCCCCCTC TCTCCCAGGT CTCCCGGACG ATTATACTCC CCAGGTGAGC CCATTCAGTA GCTCACCAGC TCTGCTATTA CCTCAACGGT CGGCTGAACG GCGTTGATTT TCTAGTACTT TGGGAACGAT ATAGTTGTTG GACTCGACTC TGAGGGCCAA TACAAAGCTA AAGTCCTTGT AAGTGGAGCT GTGGCCCGAA TGGCTTCAAA AAATGAGCTA AACATGCTTT GCAGAGGTGC TGGTCAGACG AAGATGGTAG CATAATACCT CCTCCGCCAC CAGGCCAAGA AGCCCACCCT CTTGATCGCC CATTAAAGCG AGGTGAGGTA GGAATCAGGT TAGTTTGGGG TCATTTGGTA TGTTTAGCAA TACGCTGACC CAAGTGCTCT TAACATAGCC ATTTATCTAC TGGCCAACTT GCCATTGTCC CCGAGTCTGC TCTCAGACTT TTTCAGCGAG AATTTCTCAA AGGCGATATA GTCAAGAGAT CTTTGACTTC GCAAGAATCC GCTTTGGTGG TAAATGTCAA GACTGAAATC AAGTTACAAC ATGCCTTAAC CGGAGAAGAA CTTGACCAAT GGGTCAAATA TGAAGATGTG TCGAATGCGT TGGAAATAGA TGCGAGGGAT AGGGTGGTCT ATGGCAACTG GGTTGGAACA GTTGAAGAAG TCAGTTTACC AACTATGGCA GCTTGTGCGT GAGCATGTGT TGACTTCCTC CCAGGTCTTT GAAAACGGCT TTGTAGAGAC AAAGCTTGGT CGATATTACC GTATTGCGGA AATGGGAGGT CTTTTGGAAG TCGGAAGGAG GGTTGAAGTA TGTGCATGCC TTTACTAGCT CACAAAAAGC AAATACTAAA TCGATGTAAA TAGGAAGTTC TCCCGAAGAA TCTTTTCGAG CAACTGGCCG CCATGCCCAA GCCATTACCA GATTTTGCCG AACCTCAGAC TGATCGTGTC CTGAAGATTG ATCCAGTGGT CGTCTATGTC ATTTGGAATG CTATAAACCA AAAGGTATGT TTTATAGTCG CATAAAAATT GTTTCTTGGG CCTGATTGTC TAACGATTTG TTCAGCTGCC TCCCTCCGAG CAAGAAAAGT TCAAAGAACC GGAGCCATTC TGGTACGGTG AAAATCTCAA GAAGCTTGCT TTTTTTGATA CCACGCATTC TCAACCACCA AGTATAGGAT CAACTGTTGA TTTCGTCAGC GAAGATGCCA GGAGAAGTGA GTGATATGTA TAGCCGTCGA TTTTCCAAAC TGACATTCAA TAGAATACGG CGCGGAACCC TCACGCCACG CTGAAGGCAC CGTGCTGGTT GACACAATGC GGATCTTAGC AAGCCGTTCG ACTTTAGTGC TTAGGTGGCA AACCGGAAGA GAGACGGAGG AGCCCTCAAC TGACTTTGTT CCTTACCACA ATGTGGACGA GTAAGCTCCA GGCGACCGAG ATCATAGATT CATTGCTGAT TGTAATTTGA ACAGCTACGA GACTTGGCCA GGTGAACATG TCATGTGGAG AGGCGATAAT GGCGAACGAC GGCACGCTGT TGTTCAAAAA TTTGACCCTT ACCAGCGAGT AGCTGAACTG CTCTTTATGG ATGACCAAAC GAAGGAACTC GTCCCTGTCA TGGAGCTTGA CCCCGGAGGC CGCTCTGGTT CAAATGCCTA TGGTGTGAGC ATTGGTCAAA TGGTCCTGCT TTGTGGAGAC AACGGCTCGG TACCCCCTGA AGTCCCTTCA TTCGGTCAGC ACGAAACCCC AGTGAAGAAC ATGTGGGCAA GACACGAATT TGTCAAGCTT GGCGAAGAAT ATGTGAGCGG CGATTTGAAG TTTGGCTGGT ACCCTCCCGA GGGGGACAAA CAGAGCGTTG ATTGGTGGGG CGAAGTCGTA CAGTTGCATC TTAACGGAGA AGTGACCGTC AAGCTCGCGA ACGGGGATTT GAAGACGGTG GGGATCAAGA ATCTAGCAAT TTTGAATGAT CCTGGGAGTG ACATGATCGA TGAGCTGGGA CCGGAGATGA ATGAAGGGGA GGCTATGGAT GAGGATGAAT TTGACGAGTT TGACGAGTGG CAGAACGGGC TGAGGGGAGC GCATGGAGGT TTCGTGTTTG ATGGAGCGCA GGTACATGAT TTGCAAGCTA TGTTGTCGCG GTTGAAGGAG TCTCATCAGC CAGAGGAAAG TGAGAACAGT TGGGAAACGA TGAGTGAAGA CGATATCCAC GATGTTGACA CTGAAGGGGA GGTGATGGAG GTGGATGAGA TGGAAGAGGA AGAGGAGGAG CGAGCGATCG CACAGGCAGA GGCTGCCGGT AGGAGGCAAG AGCAATCTGG AGTCCCCCTT GTGGAACAAC AATCATTTCC CCCTGTCAAA CCTTTGGCAT CTCAACCCCT TCAAAAAGCT GAGCCCCGGG CTGGACCTTC TACCGCTATC CCTAGCACTT CCCGAGCCCC ATTGCCGAAA GAAAGTCTAG ACGAAGACGA TGAACAATGG GAACGATTTG AAATGCTTGA GCAAGCCCCG AGAGATCATC ACTTCTACAA TGAGCTAAGC TCTGGTGCGG CGGCAAAGAG TTACCACTCC AGAATACAAA AGGAACATCG GGCTTTGCAA TCCTCCTTGC CAGGTGAGTC AGGTGTTGGA ACAAGACATG AGTGTTTAGC TGATTATGTT GCAGAAAACA TCCTTGTTAG AACATATGAA GATAGATTAG ATCTCATGAG GGTCTTGATT ATTGGACCTG AGGGCACACC GTAAGTTTAT CAGTTTATCA AGGCTATCAA GCGCAGGTTG TTGCTGATGA GCTTTGTCGT TTGCAGTTAC ACGGATGCGC CCTTTGTTTT TGACGTCTAC CTCAACCCTA CAAAGTTCCC CAATGAACCG CCGATCGTCC ATTTTCATTC ACACACGAAC GGTCATGGAA GGTGCAACCG TAAGTATACA CTGAATATAT TTGGAAACGG GTAGTTAATG AAGTCTTTGT ATAGCCAATC TGTACGAAGA AGGGAAGGTG TGCTTGTCGA TTTTGGGCAC CTGGTCAGGC GACGAGTCAG AGTCTTGGAA GTATGTTAAA CAGTCAAACA AAGTCGATCA TTTGATGTTC ACAGGCTAAT TTGTGTGTAG CCCATCAAAG TCGTCACTTC TCCAAGTCTT CGTCTCTATC TCCGGTTTAG TGCTTGTGAG GTGCCCCTAC CATTGTGAAC CTGCATTCGC CAAGCTTGAA GGCACAAGGG AAGGCAAGAT CAACTCGTAA GTCAAAACGT TCATGGCAAA TTTTGTGTTT ATGGTATCTG ATAAATATTT AGCCGACTTT ATTCTGAAAA GGCCTACGTT CTTTCCCGAA CTTTTGTCCG CACGGCTCTT GAACGTCCCC CCACCGGACT CGAATCAGAG ATCCGTTATT TTTATCTTAC TAGAGGCCGA CTGCGTTCGG TCATAGATCA TGCTCAGAGA TTGATAGAGA AAGGCGAGGT CGGGCAGAGT ATCGAGCAGG AAGAGGAAAA CGCCGAGATG TGGAATGCGG ATGCCATGGG ACGATTGACG ATGGGGGCGA TAATCACGTT AAAGGTTAGT TCATTAAGGT TTCAAAACAG ACTGAGTGTC GGGAACGATG ATCTGACGTT GATTGTAGAG AACGATCGGG TCGTTGCAGA AGATATGGGA TACGCAGTCT TCATAATTAC TA
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Protein sequence | MPLPPSLPGL PDDYTPQYFG NDIVVGLDSE GQYKAKVLRC WSDEDGSIIP PPPPGQEAHP LDRPLKRGEV GISHLSTGQL AIVPESALRL FQREFLKGDI VKRSLTSQES ALVVNVKTEI KLQHALTGEE LDQWVKYEDV SNALEIDARD RVVYGNWVGT VEEVFENGFV ETKLGRYYRI AEMGGLLEVG RRVEEVLPKN LFEQLAAMPK PLPDFAEPQT DRVLKIDPVV VYVIWNAINQ KLPPSEQEKF KEPEPFWYGE NLKKLAFFDT THSQPPSIGS TVDFVSEDAR RTPGDRDHRF IADCNLNSYE TWPGEHVMWR GDNGERRHAV VQKFDPYQRV AELLFMDDQT KELVPVMELD PGGRSGSNAY GVSIGQMVLL CGDNGSVPPE VPSFGQHETP VKNMWARHEF VKLGEEYVSG DLKFGWYPPE GDKQSVDWWG EVVQLHLNGE VTVKLANGDL KTVGIKNLAI LNDPGSDMID ELGPEMNEGE AMDEDEFDEF DEWQNGLRGA HGGFVFDGAQ VHDLQAMLSR LKESHQPEES ENSWETMSED DIHDVDTEGE VMEVDEMEEE EEERAIAQAE AAGRRQEQSG VPLVEQQSFP PVKPLASQPL QKAEPRAGPS TAIPSTSRAP LPKESLDEDD EQWERFEMLE QAPRDHHFYN ELSSGAAAKS YHSRIQKEHR ALQSSLPENI LVRTYEDRLD LMRVLIIGPE GTPYTDAPFV FDVYLNPTKF PNEPPIVHFH SHTNGHGRCN PNLYEEGKVC LSILGTWSGD ESESWNPSKS SLLQVFVSIS GLVLVRCPYH CEPAFAKLEG TREGKINSRL YSEKAYVLSR TFVRTALERP PTGLESEIRY FYLTRGRLRS VIDHAQRLIE KGEVGQSIEQ EEENAEMWNA DAMGRLTMGA IITLKRTIGS LQKIWDTQSS
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