| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CNF00980 |
|---|
| Symbol | |
|---|
| ID | 3258408 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_006691 |
|---|
| Strand | - |
|---|
| Start bp | 303100 |
|---|
| End bp | 305558 |
|---|
| Gene Length | 2459 bp |
|---|
| Protein Length | 578 aa |
|---|
| Translation table | |
|---|
| GC content | 49% |
|---|
| IMG OID | 638257222 |
|---|
| Product | expressed protein |
|---|
| Protein accession | XP_571573 |
|---|
| Protein GI | 58268834 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.587675 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | CCTGCCTCCT CATTCTTCAC CTCACTTTTC ATCTGCCCAC CAAATACCAT GGTCTATATA
GCAGCTCACA CCCCACCATA CACACCGCCG CACTCCCCAT TACCACAATG CCATCGCTCC
ACCTATTACC ATCTTAGATC TCCAGAAGAC TCGGGCGAGA GCGAGCCCGA GGATGGGAAG
GACACTGATT TTTGCAACTT CACGGAACGT ATGGAGATTG ATGAGGATGC TTATGTACAC
CCACAAGCCC AGTCGCCGTT CTTGAGTCTT TGCCCAGAGG TGCGTTTTTA GTGCTCTTAT
CGTCGCTTTT CTTCAGTGCC ATTGGAGCGC CTGTGCAAAT CTCGGTCCGA CAATGTACCT
TGCTATGATG GCTGATACCT TTGTTTTGTA TAATAGCTGA TACAGAGGAT ACTGTCAACT
TTCGGTGGTC GAAACGTCGT CTGCTTGGCC AACTTGGCAG CTACATGCCG TAAGCTGCGA
GCTCATATCT ACAAAGTATG CTCATTCAAA TCCATTTTTT TCTTTCCCGG TCTCAAAATA
TGCTGACGCT GGGGGATCTC GTCTCTTACG GAATAGTGCC CAGATCAAGC CATCTGGAGA
GATATATATC TAGAAATTTA TGATGATCCT AGACAGGCGT CTGCTTTCAT CAAAAGTCGC
ACAACTGCAG AGATCGATTG GCGAAAGCGG TTGCAGGATA GAGAATTTAT TATTAGAGTG
CTTAGAGAAT GGCATGTTGA CCGTTGGGAG CTTGCTGTAA GTCATCCAAA CACTGTGATT
TGAACATGTG CCGGACTGAC TTGTTTCATC AGGCCCAGCA TCTCGATCGA ATCTGCGACA
CTCTTCTAGA CATGTACATG GACCTACCAG CCGCATCTAC AGGACTTGGC AATGACACCT
CATGTTTAGA GGCAGACATT TTCCATCGTT TCTACTCTTC CAAACCTGCT CTCAACCCTT
CCGTTCTGTC TTACCTACTC TCTTCTCCTT GTTTCTCACA TTTGTACCAT CATTACCGAA
TCCTCCCTTC CTCCCCTCCG CCAACAAAGC GTCTCCGCCC TCGCGGTAGT TCTTCCTCCA
ACATCAACGA CGATGCCGCT ACGAATCCCA CCCTGTCATT TCACTCCGTC CGCTTCAAGG
TCCAAGTCTG CACCCATCCA AAACTTGCCA AGCTGCATAC TCTCCTGCCA CCTAGGTATG
ATGAAAATGA TGAGCAAGAC AGGGAATGGA GGGGTTTCAT GAGAGAGTTG GTTTATTCTC
AAAAGAACTT TACAGAGATG AATGACTGGG GCCCATTTAC GCCTGACGGT AAGGTCGATT
GGGTACTAGT CGACGCTCTT GGATCTGTTA TGAGTGAGTC GAAAACGCTT TCTGCACGTC
TGGAAATAAA TTGATTGAGT ATTCACCAGT GTCGAATGCT CAAGAGATCG TCCATAATCC
AGATATCAGT GATCACTGGC ACGATTCGAT CATGCCTCAA TCATTCGGTG TCGAGCCCAC
GCGTGGTTGG GGGTTCTCAC ATATTGAGCA CCCGCTCGGC GTCGCAGATG GTGATGTATG
GGATTGGGCG GGTGTCCAGG GTAGTTGGTG TGGTTCTTAC GCTTTCCTCG AGTATGTCTT
ACTTCTCTCC GTCCTTTCCC CTCTATGCAC TCCTCGTTTC GATTTAACTG TCAAGGAAAA
AACAAAGAAG CTGATCTGAC CCACTTGGCA TAATAGTTAT ACTGACTGGA TCGCTCTCAA
CGAACCGCGA CTCATCCTTA TGCGCGGCCG GGTCGCCCAG CTAGACCTTA CACATTACCA
CGAAGCCGTT GGCGACCTCA TGCGTCTCAA TCTCGAGCTC GACTACCCTT CTCCCGCTTC
TCCTTCCACC ACTCTCCCTC CGCTCACCAC CCACCTTCCT ACCACACGCA ACTCGCGTTT
GCCCCCGATT CATTTCATAG GGACAAGTTT GCAGAGTAAG AGTGTAACCC CCGATGCGGC
GCCGTTGAGT TCCGTTAGAG GGGTGGTGCA ACTGACGGCG GATGATCCGC CAGAAGTGAG
GTGGACGTTG GTGATTAGAT ATGCGGGAGA GGATAGATGG AGATTGGAAG GCGTACAGGT
TGGAGGAAGG GGGAGTAGGA GGGGATTCTT TGGGGTGAGT TTTTCCTTGC GATACGGAAT
GGTTTGACAG TATCGCTGAC AATGGGTATG CAGATTTGGA CTGATGCGAA CAAGGAGGAA
CACTCACCTA ACGGTCCAGT CTGGTATTGG CAGAGTTAAA CCATTTTCCC CATCTTTCCT
TTAGATCTTT CATCTTTTTC ATTTGTTACC TCATGTTGTC TCGTCTGCTT TCGGTTGATA
TTACTGTAGA TTATTTTGCT TGTTTCAAAG TTTAGACTTT TTCTCTCCGC ACGTTATTGA
ACCATCATAG ATGCGATATT CGTCCCCTGT ATACACGGCA TGTAACATCG TTTCGCTCC
|
|---|
| Protein sequence | MVYIAAHTPP YTPPHSPLPQ CHRSTYYHLR SPEDSGESEP EDGKDTDFCN FTERMEIDED
AYVHPQAQSP FLSLCPELIQ RILSTFGGRN VVCLANLAAT CRKLRAHIYK CPDQAIWRDI
YLEIYDDPRQ ASAFIKSRTT AEIDWRKRLQ DREFIIRVLR EWHVDRWELA AQHLDRICDT
LLDMYMDLPA ASTGLGNDTS CLEADIFHRF YSSKPALNPS VLSYLLSSPC FSHLYHHYRI
LPSSPPPTKR LRPRGSSSSN INDDAATNPT LSFHSVRFKV QVCTHPKLAK LHTLLPPRYD
ENDEQDREWR GFMRELVYSQ KNFTEMNDWG PFTPDGKVDW VLVDALGSVM MSNAQEIVHN
PDISDHWHDS IMPQSFGVEP TRGWGFSHIE HPLGVADGDV WDWAGVQGSW CGSYAFLDYT
DWIALNEPRL ILMRGRVAQL DLTHYHEAVG DLMRLNLELD YPSPASPSTT LPPLTTHLPT
TRNSRLPPIH FIGTSLQSKS VTPDAAPLSS VRGVVQLTAD DPPEVRWTLV IRYAGEDRWR
LEGVQVGGRG SRRGFFGIWT DANKEEHSPN GPVWYWQS
|
|---|
| |