Gene CNF00820 details

Gene Information

• Locus tag: CNF00820
• ID: 3258426
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Cryptococcus neoformans var. neoformans JEC21
• Kingdom: Eukaryota
• Replicon accession: NC_006691
• Strand: +
• Start bp: 268801
• End bp: 270790
• Gene Length: 1990 bp
• Protein Length: 469 aa
• GC content: 47%
• IMG OID: 638257206
• Product: expressed protein
• Protein accession: XP_571247
• Protein GI: 58268182
• COG category: [L] Replication, recombination and repair
• COG ID: [COG3663] G:T/U mismatch-specific DNA glycosylase
• TIGRFAM ID: [TIGR00584] mismatch-specific thymine-DNA glycosylate (mug)

Plasmid Coverage information

• Num covering plasmid clones: 34
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

AACAATGCCA AGCGACAGCG AAAATGCCCC AAGCCCAGCA TCCAAAGCGT TTGCAGACCG 
TCTAGCCAAA TACGCCTACG TCTCAACCTC TTCTTCGCCT TCACCTCGGA TGAACCCTCT 
CAGACGCTCC ACACGATCAC AAACCTCAAT TTCAGACGCC GCTAAGCCGT CTATACCTTT 
AACAACATCT CAAGAGAGGA TATACGATAG AGGATCACCC CTGAAAAAAG TAGCTTCATC 
CTCGTCTTCT TCCATATCGT TGTCCGCGAC AAAGAAGCGC TCAGCAAAAT CAATCTCAAA 
GGAGGACGAC GAGTTTCAAG ATGTCGATAC TGAAAAAGAG ACCGATGATG AGGATTACAA 
AGGAGGGAGA TTAAATTCGG GGAATCTGAA AGGCGGGGGA AAATCACCGA TGAAGAAAGG 
AATCAAGAAG CCAAGGGGTT ACGCTGCTCC CGAAATGTAT GAGCATCTCA GACCGCTGAA 
TGACCTGTTA GTTAAGGGAC AAGATTGTGA GTGGTACCTC CTAAACCCGT TGAAAAGGCT 
CCTGTATCTG GTGTGTTCAA AAAGGGACGA TCGGGACTTG GAAAGCTAAT ACAGTGCATT 
TTTGGTGGCA GTGGTGTTTT GTGGTATCAA GTGAGTCTTT GGTCCACTTT ATCCCTTCCG 
GACATTTGAT TTCAAGTACA AGACTGACAA ACTATCTACT GTAGTCCAGG TGGGACAAGT 
GTCTCAATAT ATATGGTCCC AAGGGTCTCA CAAGACGAAT AGGGAAAATG TCTTCTACTT 
TGGGCCATCA TTTCGCCCAT CCAACCAACA AGTTTTGGGT ACGTATTGTG ACTCCCAGTT 
TGTCCATGGT CTTTCCAAGC TTTAATTTTG ACAATACCAC CGTTTTGCAC CATTATATAG 
AAAGCTCTTT ATCAGTCGGG TGAGACTCCC TATAACTTCA TCGTACGAAC ATAGGATAAT 
GTTAATTCGT AATCTCCAAC AGGGCTTACT TCAAGATTGA TGTCGCCAAC TGAAGACTAT 
AAAGTCGTTG ACGAGTATAA CTATGGTCTC GTGCGTCTGC GTGTCGGCTG CTATTTTCCT 
AGTTTCTTTG AGATCTAACA CCTTTTGCAG ACCAATCTTG TGGGCAGACC GACTTCCGAG 
GTACGTTCGC AGTCTTCTAC TACGCAATGT TCGGCACTAA TCACAAGAAC TCTAAATTCC 
CTCCTTCAAC AATAACGGTA CAGCAAAGTG AATTATCTAC CCTGGAAATG AAGCTGAACA 
CTATCAACTT GTTACAAAAG TTCATAAAAT ACCAGCCCAG TGTCGTCTGT TTTGTGGGGA 
AGAAGATCTG GGATGTATTT GAGAGTGTAG TTGGGAAGAC GGCCGAGTTT GACGAGACTG 
TGAAACAAAA GGTCAAGCTG GAGGGTGAAG TTGAAAATGG AGAAGGCAGC GGTGACGGGG 
GAAAAGGAAG GAGCGTGATG ACACTCGCTC CGACACCGGA AAGAGGAACG GTCAAGATCG 
AGCCGGCCGA ACTGGGTGAT CAGCCGTCCC TACTTCCACT CTCGGCCAGT CCATCGAAAA 
CCCCGCAACT TACACCGGCC CAAACTGCTT CACTCTCTCC AGCCAAAGCT AGAGCGAAAA 
AAGGAGCTAT CAAGCCTCCA AAAACACCCT TTAGCTTCTC CCAACCTCGT GCACTGAGAA 
TTCCGCATCC TCCTGAAGAC AATGGAGGTG AAATCAAGTA TACGTATTTC TTTGTGGTAC 
CGAGTACTTC GGGGCTGGAA AGGACACCTG TGAGTCACGG CCAATCCCCC AAGGGTGTTG 
TTATCAGGTC TATTGACCGA TGTGAAAGTT TCCGGAACAA GTGGCCAATT TTGCAGCCCT 
CAAGGCATTG GTGGATGAGC TGAAAAAGGG TAGATCCCTG CAGGGCGATT TTCTGAATAT 
CAGCGTGGAA GGTGTAGAGG GGACTGTGGA AGATATGCGG CGGGCAGCTA TCTTAAAAAA 
TGCTCTATGA 

 

Protein sequence

MPSDSENAPS PASKAFADRL AKYAYVSTSS SPSPRMNPLR RSTRSQTSIS DAAKPSIPLT 
TSQERIYDRG SPLKKVASSS SSSISLSATK KRSAKSISKE DDEFQDVDTE KETDDEDYKG 
GRLNSGNLKG GGKSPMKKGI KKPRGYAAPE MYEHLRPLND LLVKGQDLVF CGIKRIGKMS 
STLGHHFAHP TNKFWKALYQ SGLTSRLMSP TEDYKVVDEY NYGLTNLVGR PTSEQSELST 
LEMKLNTINL LQKFIKYQPS VVCFVGKKIW DVFESVVGKT AEFDETVKQK VKLEGEVENG 
EGSGDGGKGR SVMTLAPTPE RGTVKIEPAE LGDQPSLLPL SASPSKTPQL TPAQTASLSP 
AKARAKKGAI KPPKTPFSFS QPRALRIPHP PEDNGGEIKY TYFFVVPSTS GLERTPFPEQ 
VANFAALKAL VDELKKGRSL QGDFLNISVE GVEGTVEDMR RAAILKNAL