| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CNF00610 |
|---|
| Symbol | |
|---|
| ID | 3258280 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_006691 |
|---|
| Strand | + |
|---|
| Start bp | 203607 |
|---|
| End bp | 206217 |
|---|
| Gene Length | 2611 bp |
|---|
| Protein Length | 563 aa |
|---|
| Translation table | |
|---|
| GC content | 48% |
|---|
| IMG OID | 638257185 |
|---|
| Product | alpha-glucosidase, putative |
|---|
| Protein accession | XP_571239 |
|---|
| Protein GI | 58268166 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0366] Glycosidases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.260556 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TGAAGTTGGA AGGTCTCATA GCAGCAAAAC CCATCACTAA TTCTCACATT CGCAACAGCT
TTGAACAAAT CATACATCAT GGTCTGTGTT ATTTCCGGTA AGATGGACTT CTTTATTCCG
TAAGAGCTCA GCCTTGAAGA GGAAGACTGA CCAACTAAAT AGACCCCGAC TGGTGGCGCC
AGGCCGTCGT CTATCAAATC TATCCCCGTT CCTTCGCCGA CGCGAACGGT GATGGGATTG
GAGACTTAAA AGGTATAACT GCTCGTGTGC CGTATTTGAA AGCATTAGGA GTGGATGCCA
TTTGGCTCAG CCCTTTCTAT CCTTCCGCTT TGCGGGATGG CGGTTGTAAG TTTAGCACTC
ATTTTTGATC ACTTGACGGT TCTGATAACC TTTCGATGTA GATGATGTGG CCGACTACAG
GGATGTCGAC CCGAAGATCG GGACATTGGA AGAGTTTGAC GAAATGACCG CTGCTTTCCA
AAAAGTCGGA ATCCGAGTCA TCGTCGATAT CGTCCCCAAC CATTCAAGCG ATGACCATGA
ATGGTTCCAA GCTGCTTTGA AAGCGGGTAA GGGGTCACCA GAGAGGGAAA GGTACATTTT
CAGAGATGGT AAGTTCCCGA AGGACGATGC ACCTTTTGCC GGATTGAGCT GATCTCACAT
AACTTAGGTC TCGGACCCAA CAAAGATCAG CCTCCTACCG ACTGGATCTG TTCTTTCGGT
GGATCTGCTT GGTCGCCTTC TGGAATGAAC GACGGTCAAT GGTATTTCCA CTGGTTTGAC
TCCTCTCAAC CGGACTGGAA TTGGGAGAAC CCAGATGTCA AAGCAGATTT CCTGAAGACC
TTGAAGTTTT GGGGTGATCG GGGAGTCTCA GGTTTCCGGA TTGACGTCGC CCACGGCCTT
GCTAAAGACA TGAGCGAGCC CTTGCCTAAC TGGGAGCAGT TGACTAAATT GACTCATCAA
AAGCTCACTA ACGGTAACTC CGAGTTGGAT CATCCCCTTC TCGACAGGAA GGAGGTACAC
GATATCTACA GATCTTGGAG AGAAGTCTTC AACCAGTTCA ATCCCCCACT CATGTGAGTC
TGGAATTGTG TTTTCTTTCT GGGCCGGTGA ACCATGGTTG ACAGTGATCT CTAGGGCTGT
TGCTGAAGCC TGGGTTGCTC CAGACCAAAA GCCCCTCTAC GCTTCTTCTG AGGGTCTCGG
CCAGACCTTC TCTTTCGATA TTCTTTTGTG CAACTTTGAT GCTGAGGAGT ACCGTCAATG
CATTAAGAGT TCATTGGCAG GAAGCAAAAA GTCCGACTCA ACTACTACCT GGGTACTGTC
CAATCATGAT GTGAGTCCTG CCGGCCCATC ATTGTGCCAA TCAGACCTTG CTGATCGATA
TACCATTCAT GGTTCGTAGG TAATGCGACA TCCCACCCGA TTCGGTCTCC CCAACGTCCC
GAATGCGAAC CATGCAATGA CTACGGACAC CTATAACAAG TTCCTTAAAA CCAAGTTGAC
GGATCCCAAG GTTGATATTG AGCAAGGGTT GAGGAGAGCC AAAGCGGCTA CTCTCATGAT
TCTTGCCTTG CCGGGATCCA CATACCTATA TCAGTGAGTC ATTTTCAGCC TTGAGGTTAC
ATTGCAAAGG CTCATCTCAG GTTACAGGGG TGAAGAACTT GGCTTGCAAG AAGTCGTCGA
AATTCCAGAC GAGGAACGAC AAGACCCTAT ATTCATCCGA ACAAAGGGAG AAGAAGTCGG
TCGTGATGGC TGTCGAGTTC CTATTCCTTG GGTTGCCGAT GAAAAGAACT TTGGCTACGG
TCCTGGCAAA CGTGCGCATC TCCCTCAGCC TGCGTGGTTC AAAGACTATG CGGTCGATGT
AGAGGAAAAG GATGCCAACA GCGTATTAAG CCTTTACCGA CGGGCTTTAG GATTGAGAAA
AGGGCTGCAA TCTGCAGAGG AGCTTGAATG GGTGGAGAAT CCTAACAAAG AAGTCCTGCA
TTTCCGAAGG CCCGGTGGAT GGGAGGTAGT TGTCAACATC GGCAAAGATT CTGTTGATCT
GCCCAAGGGT TCCGTTCTTA TTAGTTCATC TAATAACGCG CTCAAGGGTG GAAGCATTCC
TGGGGAGACG ACTGTTTGGC TCAAGTCTGC GTAGAATCTC GTATAACTTA CTAGGCCGTT
GTAATAGAAT TGAATTGTAA ATGCAGCCAA TGTCATGCAA AGTCTGAAAG GCATCGATGA
ATAATTGATG GCTGGCGAGG TGAATAAGTC AGAATGAACT CCGGGAAATC GGCATCTCTT
TTTTGGCACC GCGACCGTAG TCCATACAAC AGTATCAACA TCGCGGGAAG GTTTTATCAT
ATCAGGAGAA AGGCCAAAAT CTTCAAGAAG AATCAAACCT ACAGTCTATG TCAAAAGAAG
AAACTTTTGA GTTCCAAATC AAGCAGTTGC CCACACACCT ACCTACCTTC TCGGCCCCCT
AAAAATGTCA TTTTCTTCTT TTTTCGTCGC TATGATGGTC TTACTACGCT CCGTAACATT
CATTCCAAGA TTCGTCGTGT GCCTTCAGAG CTGCCAGCCA CGTCGGGTTC CTGCAATCGT
GCGTGAAGTA GCATGCTGTT CTCTGTGCTT T
|
|---|
| Protein sequence | MVCVISDPDW WRQAVVYQIY PRSFADANGD GIGDLKGITA RVPYLKALGV DAIWLSPFYP
SALRDGGYDV ADYRDVDPKI GTLEEFDEMT AAFQKVGIRV IVDIVPNHSS DDHEWFQAAL
KAGKGSPERE RYIFRDGLGP NKDQPPTDWI CSFGGSAWSP SGMNDGQWYF HWFDSSQPDW
NWENPDVKAD FLKTLKFWGD RGVSGFRIDV AHGLAKDMSE PLPNWEQLTK LTHQKLTNGN
SELDHPLLDR KEVHDIYRSW REVFNQFNPP LMAVAEAWVA PDQKPLYASS EGLGQTFSFD
ILLCNFDAEE YRQCIKSSLA GSKKSDSTTT WVLSNHDVMR HPTRFGLPNV PNANHAMTTD
TYNKFLKTKL TDPKVDIEQG LRRAKAATLM ILALPGSTYL YQGEELGLQE VVEIPDEERQ
DPIFIRTKGE EVGRDGCRVP IPWVADEKNF GYGPGKRAHL PQPAWFKDYA VDVEEKDANS
VLSLYRRALG LRKGLQSAEE LEWVENPNKE VLHFRRPGGW EVVVNIGKDS VDLPKGSVLI
SSSNNALKGG SIPGETTVWL KSA
|
|---|
| |