| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CNF00600 |
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| Symbol | |
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| ID | 3258247 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_006691 |
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| Strand | - |
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| Start bp | 200116 |
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| End bp | 202631 |
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| Gene Length | 2516 bp |
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| Protein Length | 563 aa |
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| Translation table | |
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| GC content | 47% |
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| IMG OID | 638257184 |
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| Product | trehalose transport-related protein, putative |
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| Protein accession | XP_571538 |
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| Protein GI | 58268764 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00879] MFS transporter, sugar porter (SP) family |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.633366 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GGCACTACGA AGGTAATATC TCTCCAGTCA TCTCAAGCAG TCTTCTCGCC TGACCTTTAG
TTACCCTTCA AATCATTAAG TCCACACCTG TTTCACATCA TCGCACCATG TCGAACGGCC
CAATTACCAC CGAACAGGTG GTACTCGACC ACGTCAAGGG TGATATCGAA GACTACGATG
ATGTTGTCCA ATCAGCACGA CAAGGTATGG AAAGCGAGAA ATCGCTATCA CTCAAGGAAA
GTCTAAGACG TTATCCACGA GCGGTAGCTT GGTCCGTCTT GCTATCCACA TCACTGTAAG
TGACCATCTC GACGACACCT CTTCAATCTG CATGTATCAT TGACTGATTC CACCTGTAGT
GTCATGGAGG GCTTTGACGT CATCCTCATC AATAACTTTT ATGCTCTTCC TCAATTTGTC
CAGAAATATG GTGTTGAGCT TGAAGGCGGT TGGTCTATTA CTGCCGCTTG GCAAGCAGGT
CTCACCAACG GTGCCAACGT CGGTGAAATC ATCGGTCTCT GCATAAATGG CTGGGCGTCT
GAGAGATTCG GTTACAAGAA GACAATGATT GGTGCCGTAG GTTGCTGCAC ATGTATTACA
AACCACGTGA AGCTGATGTA TACTTCAATC GCCCTTCCAG CTTATCATGA TGATTTGTGC
TATCTTTATT CCCTTCTTCG CGCAAAATAT TCAGACGCTG CTGGCGGGTG AGATCTTACA
AGGGTAAATC TTGCGAAACA TTTGATGTTA TTTTTTTTTT CTCGAAGCTG ACGCCTGTTT
GCTCTCAGGA TCCCCTGGGG TATCTTCCAG ACTCTAACTA CCGCATACGC CGCCGAGGTC
TCTCCAGTAG CTCTCCGACC GTATCTGACG GCATATGTCA ACCTCTGTTG GGTAATAGGT
CAAATTATTG CTTCCGGAGT CCTTCGATCC GTTCTGTCAA TGGAAACGCA ATGGGCTTAT
AGGCTACCCT TCGCTCTCCA GTGTGAGTGC CCCTACCAGA GAAAATGGCC GCCACTAACA
ACAACTTAAA TCACAGGGAT TTGGCCCGTT CCAATTTTAG TTGGCTGTCT TTTCGCCCCC
GAATCACCTT GGTGGCAAGT ACGAAACGGC CGACACGATG ATGCTCGACG AACAATTCGA
CGGCTCTTTA GCAACCCTTC TGATGAGGAG GTTGAGAACT CGCTCTCCCT CATGAAACAC
ACCAACGCCA TTGAAAAGAC CATGGCCGAA GGTACTAGCT ACTGGGATTG CTTCAGAGGT
GTCGATCTTC GCAGGACAGA GATTGCGGCT GCGGCTTGGA TGATTCAGAA TCTGTGTGGA
GCTGGTAAGT CTTCTTTGCC TTATAGGCTT TAATGCCCCT CCCTTGATGT GTATTTATCC
TTGAGTAGCA TTCATGGGTT ATTCTACCTT CTTCCTGGAG CAAGCCGGTC TCCCTACCAC
CCAGGCCTTT AACCTGTCCG TTGCCCAGTA TGCTCTCGGT ATCTGCGGGA CTGTTGTTTC
ATGGGTAGGT ATTATTTCTT TGGGTATAGA TAATGAGCTA AAATACCCCT TTACTCAGAT
CCTTATGGGA CGTGTCGGCC GGAGGAGACT ATATTTGGCC GGTCTCGCCG GCATGGTCGT
CTTTCTTGTA GTCATTGGAG GACTAGGCTT CATTTCAGTT TCAAATTCGG GTGCTCAGTG
AGTTGATCGT CTGTTGTTTT CAGTTTGTCC TTGGGCTATC AGAGGCTGAT TGGTGCTCCT
TCCTAGGTGG GCTATCGGGG CGCTGCTTCT CGTCTACACT GCATTGTATG ATGGGACTGT
TGGTCCTGTT TGTTACACCA TCGTCGGCGA AATTTCGTCA ACTCGACTCA GGGCCAAGAC
TGTTGTGTGA GTAAAGATTA ATGATCACTG ATCGTTTATT AAGTTTTCGT TCAATGGCTA
ACCAACATTC AATAGAATCG CTCGAATCGC ATACAATATC ATCGGTATCG TCAACGCTGT
TATCATGCCT TATTTCCTCA ACTCTGCCAA GTTGAATTGG GGTGCCAAGA CCGGCCTTTT
CTGGGGCGGG TTCGCGTCCT TATGTTTCAT CTGGACGTAT TTCAGGCTTC CCGAAGCCAA
AGACAGGACA TATGGTGAAC TCGACGTCCT ATTTGAGAAC AAAATCTCTG CCAGGAAATT
CGCTTCGACA ACCGTTGATC AGTTCGCTGG CCACGAAGCC CAGTTTGATG ATACTATTCC
CGTTGAAACG TTTGACGAAA AACTGTCTGG CAAGCCTTCC GTCACCCACG TGGAGTATAT
GCCAACGGAT TCAAAAAAGT AGAAGCTAGA GCAGGGCGAG GTCATCAAGT TTTAACAGGC
TGAATTGGAA GCGAGAAATG GGAGAAGTAT TTTCTGTGCT GATTGGCGTC AAGAATTTAG
GGGTTTGAAG TTTTGAAAAC AAAAGGTCTT CTCAATCGAA CACGTTGTAC TGGGTAATTG
AGATATATGT ATGTTGAGCG CGTGTCCATG CGTTTTAGCC CTGATTTTTG CAAGAT
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| Protein sequence | MSNGPITTEQ VVLDHVKGDI EDYDDVVQSA RQGMESEKSL SLKESLRRYP RAVAWSVLLS
TSLVMEGFDV ILINNFYALP QFVQKYGVEL EGGWSITAAW QAGLTNGANV GEIIGLCING
WASERFGYKK TMIGALIMMI CAIFIPFFAQ NIQTLLAGEI LQGIPWGIFQ TLTTAYAAEV
SPVALRPYLT AYVNLCWVIG QIIASGVLRS VLSMETQWAY RLPFALQWIW PVPILVGCLF
APESPWWQVR NGRHDDARRT IRRLFSNPSD EEVENSLSLM KHTNAIEKTM AEGTSYWDCF
RGVDLRRTEI AAAAWMIQNL CGAAFMGYST FFLEQAGLPT TQAFNLSVAQ YALGICGTVV
SWILMGRVGR RRLYLAGLAG MVVFLVVIGG LGFISVSNSG AQWAIGALLL VYTALYDGTV
GPVCYTIVGE ISSTRLRAKT VVIARIAYNI IGIVNAVIMP YFLNSAKLNW GAKTGLFWGG
FASLCFIWTY FRLPEAKDRT YGELDVLFEN KISARKFAST TVDQFAGHEA QFDDTIPVET
FDEKLSGKPS VTHVEYMPTD SKK
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