| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CNF00590 |
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| Symbol | |
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| ID | 3258288 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_006691 |
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| Strand | + |
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| Start bp | 197504 |
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| End bp | 199972 |
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| Gene Length | 2469 bp |
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| Protein Length | 519 aa |
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| Translation table | |
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| GC content | 51% |
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| IMG OID | 638257183 |
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| Product | hypothetical protein |
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| Protein accession | XP_571471 |
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| Protein GI | 58268630 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5422] RhoGEF, Guanine nucleotide exchange factor for Rho/Rac/Cdc42-like GTPases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.301862 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TGACGAGTAA TCTTCCTTCT CTCCTTGCCA CTCCGTTAAC CCCACTCACC GCTTCCGTCC
TCCTTTCTCA CAAAGTGACA TGATCAGACC GAAAAGAATA TGAAGCCCAG CGTAGCGTTT
GTGATTCTCA TGTGTCTCTG CGAGGCGGTC GCAGTACCTC GTGCTCTGAG CGGAAATGTG
AAGGACGTAT TTAGGCTGGA GAAGAGACAA CAGGATACGG GAACATCTGA TGGTGAGCTT
CTCATGATCT TCTGGCAGAT GCCTGCAGAA CTGATAGATA ACAGCGCCCA GTTCCCAGGC
TGCATCCTCT GCGGCTGCAT CTTCCGACAC AGGGTAAGTT CACTTTTTTT AACCAAGAGT
CCTGAAGATG ATCACCTCAT CCGAATGGCA ATTCTATCGT CAGACAGAGT ATTGTATTGA
CCACGACACT TGTTGATTCA TCGTCTATTG CTCCGGTTTC TTCTGCTACT ATATCTTCTG
TAACGACCTC GTGAGTAATT GCTGCGCATT ATGGGAATTT GCGTTGATTG CGATCGGGGC
ATTGTAGTGA TGTTGGATCT TTTACTGTAT CATCAACGAT TCAATCAACG TCTGCTACGT
CTTCAACGAC TGCATCATCT GCTGGACCGT CATCGGTTTC GCCATCACCG TCATTGGTTT
CGCCATCATC TAACGATCTA TCTACGTCTT CTACGGCCGG TCCCACGTCT GCTGAACCAA
TTACGACATC ATCACCTGAA TCATCTGTTC AACCTTCCTC ATCTTCCTCT CCCGTACCTT
CACCATCTTC TTCTTCCGAA TCTTCCACCA CTGTCCCATC AAGTAGCTCA GTGCCCACTT
CATCCGAAGC AACCTCTTCA CCCGAGCAAA GCGTCGCTGC ACCCAGCACA AGTACGGCTG
AGAGCTCTGC TGCACAGAGT GTTCAGCCTT CTACATCGCC TTCAGCAACA CCCAGCGCCT
CACAGTCTTC GGTATCTCCT TCCACGGCCC CTAGCTCCGC GGCTCCGGAG CCATCAAGCT
CTCAGGCTGG TCCTACTTCG ACCGAGCCCT CGAGTGCAGT TCCTGCCAGC TCGGATCCAC
CTGTCAGCTC TGCGGTGGCA AGCTCGTCGT CTGCAAGCCA AGCTCCTAGC TCTGCGGTGG
CAAGCTCGTC GTCTGCGAGC GAAGCTCCTA GCTCTGCAGT GGCAAGTTCT GCATCCGTTC
CCAGTTCCTC AGTTGCTAGT TCAGGGCCCA TCACATCAGA GCCCGCTAGT TCTCAACCTG
CGGCGAGTTC GGAAGCACCT TCTTCTGCAT CTTCTTCAAC ACCTTCTTCA AATCTCTCTC
CTTCTCAATC ACTTCCCCAA AGCTCGGGAA ACCCCTCTGC CGTTAGCTCT GGGCCTACCT
CGCAAGCTGC CAGTGTTTCG GCATCGGCAT CACCGCAAGT ATCGCCGTCG GTTACTACAT
CAGCGGGTGT AGTAATCACT CCTTCCGGAT CAGGCTCACA AACTTCTGGA GAGGCACCAG
CTACTTCCTC GTCTCCTGCA CCATCATCAG TACCGGCTCA ATCCTCAGCG TCCAACACAC
CATCCCAAGT TGGGTCACAA ACCATCTCGG GAGCTGCATC AGTTACATCT TCATCGCCGG
CCGTCACGTC TGATACCCCT TCCACGACCC CAGCGGACAC ACCAATTACT GCAAGCTCAA
GCCGTCCTTC CACGACTGCC GGCGGTCCTA TCACGGTCAC GGCGACCAAC ACCTACACTA
CACCATTCAC AACGACGAAT GCAGCTGGAT CGGTCTCAAC AGGTAATGCA GTGAGGACTG
TAACAGTGAT CGTCACTGCC AACGATCCGA ACCAGTCGAC TCAACCTACT GAGACGGAAT
CGGAAGGTCC GGGTGGTGAG CTCCCCATAT CTGACCATGA CAGAGGCAGA GACACTGACC
ATCAAGACAG TCGTAGTAGT GACCGTCACT GCGACAGATC CGGGGGCAAC CACGGCAAGT
GACGGAGGGG TAGTTGTTGT TTACGTTACC GAAACAGCAT CTACCACTGA TCAGTCAGGT
CGTCCGACAA ATGTTATCGA AGTACGTTTT CTTTCTTCCA TGTGTTTCGG AAAAGTCCGT
TTTTGATCGG GACAGTACTA AATCAAAATG TAGACAATAA CAGAGCACGT CCGCGTATCT
ATCGTGGCGG GCGTGACTTT AACGGCCTAC TCCACGGCAG GTAATGGCGG GTCCCTTCAA
TCGATCGGTG CTGCTTCACC AATAAAAGAT TATAATCATG GCATCTTCAT TGCCTTTGGC
ATGGGAATCT TCTCAATGCT TGTCACGGCG TTACATTTGT TGTGGCAATG AACAATTAAC
ATGCCGAGCT TGGTGGTCAA AAAAATTGGG CACTGGGAGT AGAAATGATC TTTAATGAGG
TAATGGTTTC ACGCAATCAA AAAAGGAACA GTTATAATTT GTATCTATCA TGTTGGATCA
TCTCATAGA
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| Protein sequence | MKPSVAFVIL MCLCEAVAVP RALSGNVKDV FRLEKRQQDT GTSDAPSSQA ASSAAASSDT
GSVPTSSEAT SSPEQSVAAP STSTAESSAA QSVQPSTSPS ATPSASQSSV SPSTAPSSAA
PEPSSSQAGP TSTEPSSAVP ASSDPPVSSA VASSSSASQA PSSAVASSSS ASEAPSSAVA
SSASVPSSSV ASSGPITSEP ASSQPAASSE APSSASSSTP SSNLSPSQSL PQSSGNPSAV
SSGPTSQAAS VSASASPQVS PSVTTSAGVV ITPSGSGSQT SGEAPATSSS PAPSSVPAQS
SASNTPSQVG SQTISGAASV TSSSPAVTSD TPSTTPADTP ITASSSRPST TAGGPITVTA
TNTYTTPFTT TNAAGSVSTG NAVRTVTVIV TANDPNQSTQ PTETESEGPG VVVVTVTATD
PGATTASDGG VVVVYVTETA STTDQSGRPT NVIETITEHV RVSIVAGVTL TAYSTAGNGG
SLQSIGAASP IKDYNHGIFI AFGMGIFSML VTALHLLWQ
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