| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CNF00490 |
|---|
| Symbol | |
|---|
| ID | 3258292 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_006691 |
|---|
| Strand | - |
|---|
| Start bp | 171471 |
|---|
| End bp | 172733 |
|---|
| Gene Length | 1263 bp |
|---|
| Protein Length | 253 aa |
|---|
| Translation table | |
|---|
| GC content | 47% |
|---|
| IMG OID | 638257172 |
|---|
| Product | conserved hypothetical protein |
|---|
| Protein accession | XP_571474 |
|---|
| Protein GI | 58268636 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.0288931 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGGCTCA CTCACGATGT AAGTTGGTTC GACAATGAAA TGGAGCATAC GCTAACATGA
CATTTCTATA GTTTGTTTCG AATGCGCCAT CTGTTAGTCA CATCTGGACC CGGCACACCT
TTTGAACGAG TTACTGAACG CACCGCAGCA TTTGAACCCG TTGAAGGAGA GAGAATTGGA
GCTTAGGGGT AGGCGAGCAC AGCTTGACAG TTGCAAGATC GGATCGTTGA CAGGATGTTG
TAGGACTTCA AATACCCGTT ATTGAGAATT TGGCATCTCA CCAAGGGACA TACGACACTC
TCAACCTTAA CGACAACTCC ATTACTGTTC TCGGTAACAT TCCCAATTGT ATGTCAAGAG
CTTTGAGGTG TTGATGTGAG TAGAACCTTG AGGACGGGAG CTCATGGATT GGTGTAGCAC
CACGATTGCA AGCTATACAT GCTGCCAACA ACCAAATATC GTCAATCAGC CCCTCATTAC
CTCCTAATGT GAGTGTGTTG GATTTCATGC AATCCTTTAG TTGACGTCGT GCTTGCAGAT
CCCTAATCTT GTGACTCTCG GTTCGTGCAA CTATCAGTCT TTATTTGAAG CGACAGTATC
TGACTTTGTT GTTTAGTTCT TACCGATAAT GCTATCTCAT CCCTCGCCTC CCTTATTCCT
CTCGAAACAT TGACATCCTT ACGGCATCTC TCCCTCAGAG GAAACCCTGT AACTCAACAA
GAACACTACA AGGAGTTTGT AGTTTGGAAG GTTTGTCAGT ATTATCAAAC CGCTAGACCG
GGCATTGACC ACTCGTTTTC AGGTGGCCAA GGGAAACCTC CATACTCTCG ATTTCGAACG
TATCAAAGAC TCAGTCCGTG AATCCGCCAG AAAACTCCTC ACCGACCCGC TCACCTCCCT
CCCCAACTCC CTTGCCCACC AGCTCTCAAT CCCCACGACA TCCAACATTC CTGGCTCTAC
TTTGAGTATC AAGGCTCTCC CTTCAAATGG CGTGCAAAAG GGACCAGGTG CAAAGGGAAG
GTTAATGACA CCAGATGAGA AGAGAAGAGT TGTGGAGGCG CTTACTAGAG CGCAAACGGC
GGACGAGGTG AGGAAGTTGG AGAGAATGCT GGCAGATGGA TTGGTTCCAG ATGGTGGTGT
GGATGAGGCA GTTGAGGGTG CCGTTGAGGT GAATGGATCA TAAGGACTGA GAGTCAGACG
AAAAGTACAT ACAGATTGTC TAGACGATGT TATCGATTTC GCATGGACTT TCATGTTACT
ATA
|
|---|
| Protein sequence | MRLTHDHLNP LKERELELRG LQIPVIENLA SHQGTYDTLN LNDNSITVLG NIPNSPRLQA
IHAANNQISS ISPSLPPNIP NLVTLVLTDN AISSLASLIP LETLTSLRHL SLRGNPVTQQ
EHYKEFVVWK GNLHTLDFER IKDSVRESAR KLLTDPLTSL PNSLAHQLSI PTTSNIPGST
LSIKALPSNG VQKGPGAKGR LMTPDEKRRV VEALTRAQTA DEVRKLERML ADGLVPDGGV
DEAVEGAVEV NGS
|
|---|
| |