Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CNF00480 |
Symbol | |
ID | 3258250 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Cryptococcus neoformans var. neoformans JEC21 |
Kingdom | Eukaryota |
Replicon accession | NC_006691 |
Strand | - |
Start bp | 169821 |
End bp | 171151 |
Gene Length | 1331 bp |
Protein Length | 384 aa |
Translation table | |
GC content | 49% |
IMG OID | 638257171 |
Product | hypothetical protein |
Protein accession | XP_571475 |
Protein GI | 58268638 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.110618 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GCAAAAAGAG CTATTTAAAC TTAGACAGAT CCCCTAGAAG CCGCACAAGA GATATCTCAA AATGGCATAT AGAACACTTA CCCGCTCTTT GCCTCGCTCG CTTGTTACTC CAATTCGTTT CCCCTTTCGA TCTCTCTCCA CCACTCTTCG CCGAAGTGAT ATCCTCTCCG ACCTTGAAGA GAAGCTCCAC CCTCGAGAGT TAGTTGAAAG AAAAAAGAAG TTGATGGAAG AGAAATATGC TGATAAATTG AGAAAGGCTG CTGAAAAGTG AGTTCTAACT ATCCCCATTG GCTAATTTAT CCGAGAAATC GCTGAGTGTT CGATCGTAGG GAAGGCGTCC AGGATATCGA AGAGCTCAAA AAGAAGGTAC TTCAACCCAA GCTTGATGCT GCCAAGGAAG CTGCTAGACT TGCAGAAGAA AAAATCAAGG CTGAGAAGCA ACTCAAGGAG GATCCGGTGG AGAAGAAGGT CGTAGCTGAG CGAAAGAAGA AGTTGGAGAA GAAGGAGGTT TCGCAGGCCG AGGGTGACAA GTCAGGTATC AAGGTGAGCT GTTTCTGATT AGAACGGTCT GTAATACTCG CTTATTGTCG TATAGCCCCT GTCATCCATT ATCAATCTCC CTCTTATTCA CCTTACCCCA CACGACACTA ACGCCATCTC CCAAATCTGG AATGCCTATC ACACTTCCCA CCCTACCCTC TCCAACTCAT TCCTCTCTGC GTCCCTCCCT GCATCCACAT ACGCTTCCAT GCTCGCTCTC GCCAAACAAA ACCCTTTCTT CGTCATCCCC CTTCCTCGAT TATCAGAAGC TCCCGTTGAA GCTGCCAATC ACCCTGAGAT GAAGACCGAC GAGTACGAAA TGTTCTACCT TCAGTGGCTC TTCCACCCGA CCCCTACTGC CTCTTCCCCT CCTTCCTCCG AACCTAATCC CGAACCCTTA CCTTTAACCA CCTCCGCTAT CTTCACTCCT CTAGAAGAAT TTAAAAAGTC TGGCGAATGG GCCCAACCTT ACCTCGTCTT GACTCATTAC CCCGACCTCG CCCAGACCCA CTCTCTCGTC CTTATGCGAG GCGAAATCTC CCCCGCATCC GCTTCTGGCC CTCCTGGGAG TCTCGCTAAC CCAGGTTTCT TGCTGTCCCA GCAACAAGCT CAGTTGTTGG CTTTGGCCTT GCAGAGGTTC TATTGCACTG ATATTCCTGT GCCAGGGGAG TCGGCCAAGC AGAAGGATGA AAGACTGAAG AGGCAAGACG CATTGAGAGG GTTTAGGGAA AGGCCTGAAG AATGGAACTG GACTGGTTTG GTGGAAATGG CTTATGGGGG TTTGGTATAA G
|
Protein sequence | MAYRTLTRSL PRSLVTPIRF PFRSLSTTLR RSDILSDLEE KLHPRELVER KKKLMEEKYA DKLRKAAEKE GVQDIEELKK KVLQPKLDAA KEAARLAEEK IKAEKQLKED PVEKKVVAER KKKLEKKEVS QAEGDKSGIK PLSSIINLPL IHLTPHDTNA ISQIWNAYHT SHPTLSNSFL SASLPASTYA SMLALAKQNP FFVIPLPRLS EAPVEAANHP EMKTDEYEMF YLQWLFHPTP TASSPPSSEP NPEPLPLTTS AIFTPLEEFK KSGEWAQPYL VLTHYPDLAQ THSLVLMRGE ISPASASGPP GSLANPGFLL SQQQAQLLAL ALQRFYCTDI PVPGESAKQK DERLKRQDAL RGFRERPEEW NWTGLVEMAY GGLV
|
| |