Gene CNF00460 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCNF00460 
Symbol 
ID3258080 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameCryptococcus neoformans var. neoformans JEC21 
KingdomEukaryota 
Replicon accessionNC_006691 
Strand
Start bp165535 
End bp167889 
Gene Length2355 bp 
Protein Length563 aa 
Translation table 
GC content48% 
IMG OID638257169 
Productalpha-glucoside transport-related protein, putative 
Protein accessionXP_571470 
Protein GI58268628 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID[TIGR00879] MFS transporter, sugar porter (SP) family 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0199479 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TGCGAGGAAA AACTCACTAA GGCCACATCT GTTTCATCCC ATTGACATCC ACATCTACAT 
GTCGAAGGAC CCAACTGCCG CCGAGCAGGT GGTACTCGAC CGCGTCAAGG GTGATATCGA
AGACTACGAT GATGTTGTCC AATCAGCGCG ACAAGGTATG GAAAGCGAGA AATCGCTATC
ACTCAAGGAA AGTCTGAGAC GCTATCCACG AGCGGTAGCT TGGTCCGTCT TGCTATCCAC
ATCGCTGTAA GTGACCATCT GGGCCAAATC TTTTCTATTT GCAAACAGCA CTGATCGGTT
GCACGTGTAG TGTTATGGAG GGTTTTGATG CCATCCTCAT CAGTAACTTT TATGCTCTTC
CTCAATTTGT CCAGAAATAT GGTGTTGAGC TTGAAGATGG TTGGTCTATT ACTGCCGCTT
GGCAAGCAGG TCTCACCAAC GGTGCCAACG TCGGTGAAAT CATCGGTCTC TGCATAAATG
GCTGGGCATC TGAGAGATTC GGTTATAAGA AGACAATGAT CGGTGCCGTA GGTTGCTGCA
CATGTATACA AACCACGTGA CGCTGATGTA TACTTCAATG GCCCTTCCAG CTTATCATGA
TGATTTGTGC TATCTTTATT CCCTTCTTCG CGCAAAATAT TCAGACCCTG CTGGCGGGTG
AGATCTTACA AGGGTAAATC TCACGAAACA TTTGATGTTT TTTGTCAAAG CTGACGCCTG
TTTGCTCTCA GGATCCCCTG GGGTATCTTC CAGACTCTAA CTACCGCATA CGCCGCCGAA
GTCTCTCCAG TAGCTCTCCG ACCGTATCTG ACGGCATATG TCAACCTCTG TTGGGTAATG
GGTCAAATTA TTGCTTCCGG AGTCCTTCGA TCCGTTCTGT CAATGGAAGG GCAATGGGCT
TATAGGCTAC CCTTCGCTCT CCAGTGTGAG CACCCCGGCC AGAGAAAATG GCCGTCACTA
ACAACAACTT CGATCACAGG GATTTGGCCC GTTCCAATTT TAGTTGGCTG TCTTTTCGCC
CCCGAATCAC CTTGGTGGCA AGTACGAAAC GGCCGACACG ATGATGCTCG ACGAACAATT
CGACGGCTCT TTAGCAGCCC TTCTGATGAG GAGGTTGAGA ACTCGCTCTC CCTCATGAAA
CACACCAACG CCATTGAAAA GACCATGGCC GAAGGTACTA GCTACTGGGA TTGCTTCAAA
GGTGTCGATC TCCGCAGGAC AGAGATTGCG GCTGGAGCTT GGATGGTTCA GAATCTGTGT
GGCGGTGGTC GGTCTTTGCC TTATGAGGTT TATGGGCCCC CGGCTGATGT ACTTGTCTTT
GGGTAGCATT TATGGCCTAT TCTACTTTCT TCCTGGAGCA AGCCGGTCTC CCTATTACCC
AGGCCTTTAA CCTGTCCATT GCCCAGTACG CTCTCGGTAT CTGCGGGACT GTTGTTTCAT
GGGTAGGTAT TATTTCTTTG GATATAGATA ATGAGCTAAA ATGCCCCTTT GTTCAGATCC
TTATGGGAAG TGTTGGCCGA AGAAGACTAT ATTTGGTCGG TCTCGCCGGC ATGGTCGTCT
TCCTTGTAAT CATTGGAGCA CTAGGCTTCG TTTCAGTCTC AAATTCGGGT GCTCAGTGAG
TTCAGTCCTC GGGCTACTCG ACGCTGATTG GCGCTTCTTC CTAGATGGGC TGTTGGGGCT
TTGCTTCTAG TTTACACTGC ATTATACGAT GCTACTGTTG GTCCTGTTTG TTACACCATC
GTCGGTGAAA TTTCCTCAAC TCGGCTCAGG GCCAAAACCG TTGCGTGAGT AGCAATTGAT
AATTGCCAAT TTTTTTACTC TGTCTTTCAG TCACTGGCTA ATCAACACCA CCTCAATAGC
ATCGCTCGAA TCGCATACGT CATCATTGGT ATCGTTAACG CTGTTATCAT GCCTTATTTC
CTCAACTCTG CGGAGTTGAA TTGGGGTGCC AAGACCGGCT TTTTCTGGGG CGGGTTTGCT
TTCCTATGTC TCATCTGGAC GTTCTTCAGG CTTCCCGAAG CCAAAGACAG GACATATGGC
GAACTCGACG TCCTCTTTGA GAACAAAATC ACTGCCAGGA AATTCGCTTC GACAACCGTT
GATCAGTTCG CTGACCACGA AGGCCATTTT GACAATATTA TTGCAGTCGA AACATTTGAC
GGAAAACTGT CTAGCAAACC TTCAATCGCC CATGTGGAGT ATTCCCTAAC GGGTTTAGAA
AAGTAGACGC TTGAGCAAAG CGAGATCATC AAGTTTTAAC AGGCTGAATT CGAAGCAAGA
ATAGACGAAT TACATTTGTG GTAGTTTGCA TCAGGGGATT TTTTATTTTT AATAGGTTTT
CTCATTGGAA CAAGT
 
Protein sequence
MSKDPTAAEQ VVLDRVKGDI EDYDDVVQSA RQGMESEKSL SLKESLRRYP RAVAWSVLLS 
TSLVMEGFDA ILISNFYALP QFVQKYGVEL EDGWSITAAW QAGLTNGANV GEIIGLCING
WASERFGYKK TMIGALIMMI CAIFIPFFAQ NIQTLLAGEI LQGIPWGIFQ TLTTAYAAEV
SPVALRPYLT AYVNLCWVMG QIIASGVLRS VLSMEGQWAY RLPFALQWIW PVPILVGCLF
APESPWWQVR NGRHDDARRT IRRLFSSPSD EEVENSLSLM KHTNAIEKTM AEGTSYWDCF
KGVDLRRTEI AAGAWMVQNL CGGAFMAYST FFLEQAGLPI TQAFNLSIAQ YALGICGTVV
SWILMGSVGR RRLYLVGLAG MVVFLVIIGA LGFVSVSNSG AQWAVGALLL VYTALYDATV
GPVCYTIVGE ISSTRLRAKT VAIARIAYVI IGIVNAVIMP YFLNSAELNW GAKTGFFWGG
FAFLCLIWTF FRLPEAKDRT YGELDVLFEN KITARKFAST TVDQFADHEG HFDNIIAVET
FDGKLSSKPS IAHVEYSLTG LEK