Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CNF00460 |
Symbol | |
ID | 3258080 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Cryptococcus neoformans var. neoformans JEC21 |
Kingdom | Eukaryota |
Replicon accession | NC_006691 |
Strand | + |
Start bp | 165535 |
End bp | 167889 |
Gene Length | 2355 bp |
Protein Length | 563 aa |
Translation table | |
GC content | 48% |
IMG OID | 638257169 |
Product | alpha-glucoside transport-related protein, putative |
Protein accession | XP_571470 |
Protein GI | 58268628 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | [TIGR00879] MFS transporter, sugar porter (SP) family |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0199479 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TGCGAGGAAA AACTCACTAA GGCCACATCT GTTTCATCCC ATTGACATCC ACATCTACAT GTCGAAGGAC CCAACTGCCG CCGAGCAGGT GGTACTCGAC CGCGTCAAGG GTGATATCGA AGACTACGAT GATGTTGTCC AATCAGCGCG ACAAGGTATG GAAAGCGAGA AATCGCTATC ACTCAAGGAA AGTCTGAGAC GCTATCCACG AGCGGTAGCT TGGTCCGTCT TGCTATCCAC ATCGCTGTAA GTGACCATCT GGGCCAAATC TTTTCTATTT GCAAACAGCA CTGATCGGTT GCACGTGTAG TGTTATGGAG GGTTTTGATG CCATCCTCAT CAGTAACTTT TATGCTCTTC CTCAATTTGT CCAGAAATAT GGTGTTGAGC TTGAAGATGG TTGGTCTATT ACTGCCGCTT GGCAAGCAGG TCTCACCAAC GGTGCCAACG TCGGTGAAAT CATCGGTCTC TGCATAAATG GCTGGGCATC TGAGAGATTC GGTTATAAGA AGACAATGAT CGGTGCCGTA GGTTGCTGCA CATGTATACA AACCACGTGA CGCTGATGTA TACTTCAATG GCCCTTCCAG CTTATCATGA TGATTTGTGC TATCTTTATT CCCTTCTTCG CGCAAAATAT TCAGACCCTG CTGGCGGGTG AGATCTTACA AGGGTAAATC TCACGAAACA TTTGATGTTT TTTGTCAAAG CTGACGCCTG TTTGCTCTCA GGATCCCCTG GGGTATCTTC CAGACTCTAA CTACCGCATA CGCCGCCGAA GTCTCTCCAG TAGCTCTCCG ACCGTATCTG ACGGCATATG TCAACCTCTG TTGGGTAATG GGTCAAATTA TTGCTTCCGG AGTCCTTCGA TCCGTTCTGT CAATGGAAGG GCAATGGGCT TATAGGCTAC CCTTCGCTCT CCAGTGTGAG CACCCCGGCC AGAGAAAATG GCCGTCACTA ACAACAACTT CGATCACAGG GATTTGGCCC GTTCCAATTT TAGTTGGCTG TCTTTTCGCC CCCGAATCAC CTTGGTGGCA AGTACGAAAC GGCCGACACG ATGATGCTCG ACGAACAATT CGACGGCTCT TTAGCAGCCC TTCTGATGAG GAGGTTGAGA ACTCGCTCTC CCTCATGAAA CACACCAACG CCATTGAAAA GACCATGGCC GAAGGTACTA GCTACTGGGA TTGCTTCAAA GGTGTCGATC TCCGCAGGAC AGAGATTGCG GCTGGAGCTT GGATGGTTCA GAATCTGTGT GGCGGTGGTC GGTCTTTGCC TTATGAGGTT TATGGGCCCC CGGCTGATGT ACTTGTCTTT GGGTAGCATT TATGGCCTAT TCTACTTTCT TCCTGGAGCA AGCCGGTCTC CCTATTACCC AGGCCTTTAA CCTGTCCATT GCCCAGTACG CTCTCGGTAT CTGCGGGACT GTTGTTTCAT GGGTAGGTAT TATTTCTTTG GATATAGATA ATGAGCTAAA ATGCCCCTTT GTTCAGATCC TTATGGGAAG TGTTGGCCGA AGAAGACTAT ATTTGGTCGG TCTCGCCGGC ATGGTCGTCT TCCTTGTAAT CATTGGAGCA CTAGGCTTCG TTTCAGTCTC AAATTCGGGT GCTCAGTGAG TTCAGTCCTC GGGCTACTCG ACGCTGATTG GCGCTTCTTC CTAGATGGGC TGTTGGGGCT TTGCTTCTAG TTTACACTGC ATTATACGAT GCTACTGTTG GTCCTGTTTG TTACACCATC GTCGGTGAAA TTTCCTCAAC TCGGCTCAGG GCCAAAACCG TTGCGTGAGT AGCAATTGAT AATTGCCAAT TTTTTTACTC TGTCTTTCAG TCACTGGCTA ATCAACACCA CCTCAATAGC ATCGCTCGAA TCGCATACGT CATCATTGGT ATCGTTAACG CTGTTATCAT GCCTTATTTC CTCAACTCTG CGGAGTTGAA TTGGGGTGCC AAGACCGGCT TTTTCTGGGG CGGGTTTGCT TTCCTATGTC TCATCTGGAC GTTCTTCAGG CTTCCCGAAG CCAAAGACAG GACATATGGC GAACTCGACG TCCTCTTTGA GAACAAAATC ACTGCCAGGA AATTCGCTTC GACAACCGTT GATCAGTTCG CTGACCACGA AGGCCATTTT GACAATATTA TTGCAGTCGA AACATTTGAC GGAAAACTGT CTAGCAAACC TTCAATCGCC CATGTGGAGT ATTCCCTAAC GGGTTTAGAA AAGTAGACGC TTGAGCAAAG CGAGATCATC AAGTTTTAAC AGGCTGAATT CGAAGCAAGA ATAGACGAAT TACATTTGTG GTAGTTTGCA TCAGGGGATT TTTTATTTTT AATAGGTTTT CTCATTGGAA CAAGT
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Protein sequence | MSKDPTAAEQ VVLDRVKGDI EDYDDVVQSA RQGMESEKSL SLKESLRRYP RAVAWSVLLS TSLVMEGFDA ILISNFYALP QFVQKYGVEL EDGWSITAAW QAGLTNGANV GEIIGLCING WASERFGYKK TMIGALIMMI CAIFIPFFAQ NIQTLLAGEI LQGIPWGIFQ TLTTAYAAEV SPVALRPYLT AYVNLCWVMG QIIASGVLRS VLSMEGQWAY RLPFALQWIW PVPILVGCLF APESPWWQVR NGRHDDARRT IRRLFSSPSD EEVENSLSLM KHTNAIEKTM AEGTSYWDCF KGVDLRRTEI AAGAWMVQNL CGGAFMAYST FFLEQAGLPI TQAFNLSIAQ YALGICGTVV SWILMGSVGR RRLYLVGLAG MVVFLVIIGA LGFVSVSNSG AQWAVGALLL VYTALYDATV GPVCYTIVGE ISSTRLRAKT VAIARIAYVI IGIVNAVIMP YFLNSAELNW GAKTGFFWGG FAFLCLIWTF FRLPEAKDRT YGELDVLFEN KITARKFAST TVDQFADHEG HFDNIIAVET FDGKLSSKPS IAHVEYSLTG LEK
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