| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CNF00390 |
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| Symbol | |
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| ID | 3258319 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_006691 |
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| Strand | + |
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| Start bp | 144721 |
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| End bp | 149952 |
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| Gene Length | 5232 bp |
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| Protein Length | 1466 aa |
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| Translation table | |
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| GC content | 48% |
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| IMG OID | 638257162 |
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| Product | DNA-directed RNA polymerase iii largest subunit, putative |
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| Protein accession | XP_571468 |
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| Protein GI | 58268624 |
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| COG category | [K] Transcription |
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| COG ID | [COG0086] DNA-directed RNA polymerase, beta' subunit/160 kD subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.297029 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACACCT GGGCGGTGGT CGACCAGAAT GAGAAGCACT ACGTCTCTTC AGACGTTCCT
CGTAGAATGT AAATACTTCC TATTGGCTCT ATTATTGGTC CAACCTAATT CAATTGTGGT
TTGTAGAAAA CATATTCAGT TTCAACCATT CACACCCAAG GATATTGTCC GAATTTCAGA
AGTCCAAGTT AGCATTGCCG AGCTGTATCA GAATAATGAG GATGGAACAA GAACTACGGC
TCTTCAAGGA CCTTTGGATG CCCGTATGGT GTGTCTTAGT CACATATATA TATACGCTTA
TAAAGCGCTT ACCACGTTGC ACGTACATAC AGGGACCCAA CGAGAAGGGA AAGAAGTGTG
CGACTTGTGG CGAAGACACT CAGAAATGTG TTGGGCATTA TGGTTACATC AAGCTTGTTT
TGCCTGTATT CCATATCGGA TACTTTAGGC CCACCATCAA TATGCTCTCT TGTATATGTA
AAGTAAGGCC TTTGACATAT TCTTCGTCGC CAATTACTAA TGATTGCTAC AGACTTGTGC
TCGTGTCCTT CTACCAGAGA CAGAACGCGC TTCCTTCCTT AAACGTTTTC GTCGCCCTAA
CCTCGAATCT CTTCAACGTC AATCTGCTGC CAAAGCTGTC CTCGCAGCCT GTAAGAAGCA
AAATATATGT ACGTACTGCG GTGCCCCCAA CGGTATCGTC AAGAAGTCCG GTCCCCTTAG
GATTTCGCAC GAACCCTACC GAGCGGCCAA GATGGCAAGT ATGAAGGATG AGTGGATGGC
GACCTTCAAA AATGCGGTGG CGGAGAATCA GGCGGTTGCA ACGCATTTAG CCAAGGCTGT
GGATGATTTG AATCCGTTAA AGGTGTTAAA CTTGTTCGAA AGAATTACTG CGGAGGTGCG
TTCACTTCAC TACATGTTTA GGGCTTCGCT AATGAATTCC TAGGATTGCG AGTTACTATC
ATTACATCCT GAAGTTGGTA GACCTGAAGA TTACATTTGG CAATACATCT CTGTACCACC
TCCTTGTATT CGACCATCTG TTGCTTCAGA GGCTGGAAAG TGAGTTTTGT CCCGTAATCC
ATTTGGATTC TTGCTGAGAA CACGGCAGCA ACGAAGATGA CCTGACGGCC AAGCTCGCCG
AGATTGTCAA CTATAACAAT ACCCTGGCAC TCATGATGGA CTTGGGTAGG GGTATTGAGA
TGATTTCGGT GAGTAGATAA CGCGAAGCCA AATTTTTAAA GCTAAAGGGG GAATTTAGTC
CAACTGGGAA GTCTTGGGTC AAGCAGTTGC GCTGTATATT AACTCTCAAG CACCTGGTAT
GCAAACCATT GGCGTAAGTT CGTCCATTAA TATACCTTTT TTTCGCTGAG CCACGCATAG
AGTAAGCCCA TCCGAGGTTT CGTACAACGC CTCAAGGGTA AACAAGGTCG ATTCCGAGGT
AATCTTTCCG GTAAACGTGT CGACTTTTCC GGACGAACTG TCATTGGTCC AGACCCGAAT
CTCCGTATCG ACGAAGTCGC CGTTCCAGAA AAGGTCGCCG TCAAGCTTTC ATATCCAGAA
AGAGTGACAG ATTACAATCT TCAACTTATG CGACAAGCGA TCATCAACGG TTCAAAGCTT
CATCCTGGTG CGAATGTGCT GGAAAGAAAA CATGAGAATG GATCCACCGT GCGGATCTCG
CTGAATGTCA TGAAGGATTT GGAAGCGAGG AAAAGATATG CGAGAGAGTT ACAGATTGGA
GATATTGTAC ACCGACATGT GAGGGATGGA GAGTAAGTTG GAATGATAGT TAATACGGAG
AGGTAATGCT AATTATGAGC AGTATTGTAT TGTTTAACCG ACAGCCGTCT TTGCACAAGC
TGTCTATCAT GTGTCATCGA GTCCGAGTCA GGCCCTGGCG GACGTTCCGG TTGAACGAAT
GTGTCTGTAA CCCTTACAAC GCCGATTTCG ATGGTGACGA AATGAATTTA CGTATGTCAC
CTCATCCTGT ATCAAGTTAG AGCACTAATT GTTTTGTATA GACGTTCCGC AAACTGAGGA
AGCTCGTACA GAAGCTCTCG AACTCATGTC GGTCAAGAAG AACCTGGTTA CACCGCGAAA
CGGAGAACCC ATTATTGCTG CTATTCAGGA TTTCATCACA GCCGCCTACC TGCTCTCTCG
ACGAGACCGA TTCTACGATC GACAACAGTT CACGCAGATT GTTTCTTACC TCGATGATGC
CAACTTGAAG ATTGAGATGC CTCCTCCGAC TATCTGGAAG CCTGTCAGAC TCTGGACTGG
TAAACAAATT TTCAACCTTC TCATGCGACC CAATAAGGAA TCCAAAGTAC TCGTCAATCT
CGAAGCTAAG TGCCGAACGC TCGTCGACCC CGCCAAGGAA GACCGTTTTC CTCCCGACAT
GTCTCCCAAT GACGGATACC TTGTCATCCA GAACAGTGAG ATCATGTGTG GTGTCTTCGA
CAAAAACACG GTTGGTGACG GAAAAAAGAA CTCGGTGTTC GGTGTCATTC TGAGGGATTA
CGGACCTGAG GAAGCGGCGC AGGCGATGAA CAGATTAGCC AAGATTGCAG CTAGGTGGTT
AGCAAACATC GGTTTCTCTC TCGGTATCAA CGATGTTATC CCCGGTCCTA TCCTCCATGC
GTCTAAGGAT GCCCGTGTCG AGAAAGCTTA TGATGAATGT GACGTTTTCA TCGATCTTGC
TAAGAAGGGC AAATTGGAGA ATGCGCCCGG TTGTGACCAA GAAGCCACTC TGGAGTCAAA
GATCTCAAAG ACACTTTCCG ACGTCCGAGA AGCTGTCGGT AAGATTTGTA TGCAGGAGTT
GAGTAGACAC AATGCCCCTC TTATCATGGC CACCTGTGGT TCTAAAGGTA AGTCGGCTGT
ATCGAATCAA GAAGGTCATT GCTGACAAAA ATATAGGTTC CGTCATTAAC GTCGCCCAAA
TGGTTGCCTG TGTCGGTCAA CAGATCATTG GTGGTTCTCG TGTTCGAAAC GGTTTCCAGG
ATCGGTCGCT TCCTCACTTC CGCAAAAAGT CCAAGAACCC TCCCTCCAAG GGGTTCGTCC
GCAATTCTTT CTTCTCCGGC CTCACTCCTC CCGAATTCCT TTTCCACGCC ATGTCTGGTC
GAGAAGGTCT GGTCGACACT GCAGTCAAGA CTGCCGAAAC CGGTTATATG GCTCGTCGAT
TGATGAAGGC GCTTGAGGAC TTGTGTACAC ACTATGATCT GAGTGTTAGG AATTCGGTTG
GAGGTATCGT GCAGTTCCAA TACGGTGACG ATATGCTTGA TCCGGCTTGT TTGGAAGGTG
ATGCTACGCC TGTGGAGTAC GTTCGAAGTT GGACGCATGC TTGTGTAAGT TTTCTCCCCC
CGTCTTATGT GTGAGAGGTG CTGATGAAAG ACAATAGCGA ACGGCCGGTA ACCAAGGACG
AGCTCTGTAT CCCTATGAAG TTCGCCGAAT CGCTGCTCGA ATATACCCCG AGTCTTTTGT
TCCTCCCAAC TTCTCTCCAT CCCTGCCTAA GACCAAGAGT CGGCGTCGCA AGGAACCCAC
TCCGCCGCCG CCTGTCGTTG CACCTACTCT CCCCAAGGAG TGGGAAGGTT GTCACCACAA
GTTCAGAGAG AACACCTACA AGTTTGTTGT GGATAAGATC GTTAAGCAAA TGGTTGACCA
GAGGCTGGCG AGGGGTTTAC CGGATGCGGA TGATGAGGAA ATGGCGGAGG AGTACGAGGC
ATTGTTGAAC TCGGATGATC GTAAGATAGC TCCGTTTTTT CGTTGGGCCA AGTCCCGCTA
ACTATCTGTA CAGCTGCTGT TCAGCGTGTA CTGGAGAATG CCAACAAGGT TACCGAAGCT
CAACTGAGTT CTTTCCTCGA AAACTGTCGT ATCCGCTACC TTCGAGCCAA GATCGAACCC
GGATCTACTG TCGGTGCCGT CGGTGCTCAG TCTATTGGTG AACCTGGTAC ACAAATGACG
TTGAAGACTT TCCATTTTGC TGGTGTCGCT TCGATGAACG TCACGTTGGG TGTACCCCGT
ATCAAGGAAA TTATCAATGC TGCAAAGGTT ATTAGTACGC CGATTATTGC GGCTGAGTTG
GCCATTCCAG AAAGTGAAAC GGCGGCGAGG ATTGTGAAGG GGCGAATAGA GAAGACAGTT
TTGGGTGATG TGAGTATGCG GATATCCACA TATATGAAGT TGCTGATAGA ATTTTTAGAT
CGCGGCAGTG ATTGAGGAGA GTTGGACAAA CGCAAACGCC TACATTGAGG TTCACATTGA
TATGGATGCT GTGCGACGAC TACAGGTAGG TCTTCTCGAA GGATATGCTG GCCATTGGAA
GATGCTAATG TTTGATAGCT CGAGATTTCA CTGGAGTCCA TCAAATGGGC ATTGGTTAGG
GCCAACAAGC TCAAGATCCC TGAGGGCGTA AGTGCAGCCA CTATCCTCTC CGTAATTCTT
ACTGACGTTC CTATAGTCCA TTCACATTTC ACAAAAGACC TCACGTATCC GTATTTGGAT
TGACGAATCA GACAAGGATA AGGGTGTTGG TATCTACGAA CGTCTGAAAT TCCTCAAGCG
CGCCATCCCC TCCGTTCAGG TCAAGGGTCT CCCTGCTATT GAACGTGGTG TCGTTACCAA
GGACGAGAAG AACGAGAAGA TCCATCGATT GCTTGTCACT GGTTACGGTC TGTCAGAGGT
CATGGGTACC GAAGGTGTCG ACGGTCTCAA GACTAAGACC AACCACGTCA TGGAGACTCA
ACAGGTTCTC GGTATCGAAG CCGCCAGGTC TACTATTTAC AATGAAATCC AGACGACCAT
GAAATCGCAC GGTATGTCAA TCGACCCGCG ACATGTCATG TTGTTGGGCG ATGTCATGAC
CTATAAGGGT GAGGTGTTGG GTATCACGAG GTTTGGTGTG CAGAAAATGA AAGACTCGGT
TCTGATGTTG GCGAGTTTCG AGAAGACGAC AGATCACTTG GTAAGTCTTG GGAGTATCCC
ACCTATCTCG TTGCGTATAG CTGACTTTAT CAATTCCAGT TTGACGCTTC TTTGTACTCA
AAGAAGGACG AAATTCAAGG TGTATCGGAA TGTATCATCA TGGGAACTCC TGCTCCTGGT
TGTGGTACCT CTCTCGCGTC TATCGTCACT CCCGCTCCAC CACTACCCTC CAAGAAGCCC
TTGCTGTTTG AGGCGGCGTA CAAGGCGGGC CAGCATAGAA TGTCGAAGGG GATGATGGTA
GCGGCGTACT AG
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| Protein sequence | MDTWAVVDQN EKHYVSSDVP RRIKHIQFQP FTPKDIVRIS EVQVSIAELY QNNEDGTRTT
ALQGPLDARM GPNEKGKKCA TCGEDTQKCV GHYGYIKLVL PVFHIGYFRP TINMLSCICK
TCARVLLPET ERASFLKRFR RPNLESLQRQ SAAKAVLAAC KKQNICTYCG APNGIVKKSG
PLRISHEPYR AAKMASMKDE WMATFKNAVA ENQAVATHLA KAVDDLNPLK VLNLFERITA
EDCELLSLHP EVGRPEDYIW QYISVPPPCI RPSVASEAGN NEDDLTAKLA EIVNYNNTLA
LMMDLGRGIE MISSNWEVLG QAVALYINSQ APGMQTIGSK PIRGFVQRLK GKQGRFRGNL
SGKRVDFSGR TVIGPDPNLR IDEVAVPEKV AVKLSYPERV TDYNLQLMRQ AIINGSKLHP
GANVLERKHE NGSTVRISLN VMKDLEARKR YARELQIGDI VHRHVRDGDI VLFNRQPSLH
KLSIMCHRVR VRPWRTFRLN ECVCNPYNAD FDGDEMNLHV PQTEEARTEA LELMSVKKNL
VTPRNGEPII AAIQDFITAA YLLSRRDRFY DRQQFTQIVS YLDDANLKIE MPPPTIWKPV
RLWTGKQIFN LLMRPNKESK VLVNLEAKCR TLVDPAKEDR FPPDMSPNDG YLVIQNSEIM
CGVFDKNTVG DGKKNSVFGV ILRDYGPEEA AQAMNRLAKI AARWLANIGF SLGINDVIPG
PILHASKDAR VEKAYDECDV FIDLAKKGKL ENAPGCDQEA TLESKISKTL SDVREAVGKI
CMQELSRHNA PLIMATCGSK GSVINVAQMV ACVGQQIIGG SRVRNGFQDR SLPHFRKKSK
NPPSKGFVRN SFFSGLTPPE FLFHAMSGRE GLVDTAVKTA ETGYMARRLM KALEDLCTHY
DLSVRNSVGG IVQFQYGDDM LDPACLEGDA TPVEYVRSWT HACRTAGNQG RALYPYEVRR
IAARIYPESF VPPNFSPSLP KTKSRRRKEP TPPPPVVAPT LPKEWEGCHH KFRENTYKFV
VDKIVKQMVD QRLARGLPDA DDEEMAEEYE ALLNSDDPAV QRVLENANKV TEAQLSSFLE
NCRIRYLRAK IEPGSTVGAV GAQSIGEPGT QMTLKTFHFA GVASMNVTLG VPRIKEIINA
AKVISTPIIA AELAIPESET AARIVKGRIE KTVLGDIAAV IEESWTNANA YIEVHIDMDA
VRRLQLEISL ESIKWALVRA NKLKIPEGSI HISQKTSRIR IWIDESDKDK GVGIYERLKF
LKRAIPSVQV KGLPAIERGV VTKDEKNEKI HRLLVTGYGL SEVMGTEGVD GLKTKTNHVM
ETQQVLGIEA ARSTIYNEIQ TTMKSHGMSI DPRHVMLLGD VMTYKGEVLG ITRFGVQKMK
DSVLMLASFE KTTDHLFDAS LYSKKDEIQG VSECIIMGTP APGCGTSLAS IVTPAPPLPS
KKPLLFEAAY KAGQHRMSKG MMVAAY
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