Gene CNF00290 details

Gene Information

• Locus tag: CNF00290
• ID: 3258022
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Cryptococcus neoformans var. neoformans JEC21
• Kingdom: Eukaryota
• Replicon accession: NC_006691
• Strand: +
• Start bp: 95743
• End bp: 99266
• Gene Length: 3524 bp
• Protein Length: 977 aa
• GC content: 53%
• IMG OID: 638257150
• Product: nucleoside-diphosphatase, putative
• Protein accession: XP_571453
• Protein GI: 58268594
• COG category: [G] Carbohydrate transport and metabolism; [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG5371] Golgi nucleoside diphosphatase

Plasmid Coverage information

• Num covering plasmid clones: 18
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

CTTCACCCTC CCAAAATTCC CGAACAATAA GTGTGGACGA GGGCGGACGA CACGGGAAGA 
CAGGAGGAAA GAAGAAGCCT TCATTCCAAG GCAAAAAGCG AGACCCGCAT ATCGTCATAA 
CTCCCCCCCA CCCCCACGCA CACCTCCGCT CCGCAGCAAA AGAAAACGTA CAACGTCTTG 
GCTAACGGAA ACATCTCATA CGGGAGCCTC AAAACGATAA GATACTGCAC ACCTAGCTCC 
CATACACATC TCATTCAGGT CTGTCAAGTG CATACATAGG AGCAAGCGCA CGAGCACGAT 
GGCACCATCC GTTACACCAC TCACCACTCA CTACGCCCTA GTCATCGACG CTGGCTCATC 
GGGTTCGCGA TTACAGATAT ACTCGTGGCG AGATCCAGAT TTGGAAAGAG CTGAGATTCT 
TCAGGATGTG AAGAACATTG AGAGACAAGG TTCGAGTTCG AGCTCCAGGG GAGGCGGTCG 
GTGGTGGTGG GATGGAGAAG ATGGATGGAA GGGCAAAGGG AAAGGAAAAG GGAAGGAGAT 
GGAGGAGATG GCTTTGAGAA GGTTGGTGAG AGTTGGCAAA GGGGTGGAAG GAGATGACTG 
GATGAAAAGA GTCGAGCCTG GTATGTTGTG TTGGACTATG TTCATTACAA GATGATACTG 
AAGCGCCACC TCCTTGCCAC AGGTATATCC ACCGTCGACC CCGACAATAT CCCAGAGTAC 
CTCGCCCCGC TACTCACACA TGCTCTTCAA CACATCCCAC CCTCGGTCCA CTCCTCCACA 
CCCATTTACG TCCTCGCCAC AGCAGGCATG CGTCTCTTGC CTTCTCAGCA GCGCGATGCC 
ATCTTACAAG CTACATGCGA TACATTACGG AACGACTACC CGTTCCTTGT CCCTGGGCCG 
ACCGAGGAAG GGCCGTGTGG TGAAAATGTA AGGGTGATTG ATGGGGAGGA AGAAGGTATC 
TGGGGTTGGG TAGCTGTGAA TTATCTCATG GACGGTTTCG GTCATGCCCC TTCGCCTTCA 
TCTATATCCA ATCCCGGAAC ATCATCATCG TCTAGTACCA ACCTGCTCCC TCTCGCCCCA 
CTAGCTTCCG CCCCTCCAGA CTCTTCCTCC TCTTCCATCA CGCCCGTCGA CATTGCCCAC 
CACTCCCCCA CATTCGGCTT CCTCGACATG GGCGGCGCTT CCACTCAACT AGCCTTCTCC 
CCCTCTGCTT CCGAACTTCT TACTTCTGGT TTCCCACTCG ACAAACTCCG GACAGTTAGT 
CTCAGATTAC TTTCGGGCGA ACAAGTCGAT TGGCCGGTCT TTGTAGCGAG CTGGCTTGGG 
TTCGGGACGA ACCGCGCTCG GGAACGGTAT ATGACATCTC TTTACGAGGA ATGGGCCGCT 
GCCCATCCTT CCCCTTCTGC GCAAGACCTA GCGACACCCA TCCCGGACCC CTGTCTTCCC 
AAAAACCTCA CCATCACCCC TTCCCTCTCT TCTCAACCCC CTTTAATAGG AACCGGCTCA 
TTCCCCGAGT GTCTCACCTC CCTTCACCCT CTCCTCGAAC ATTCCACCCC TTGCCCCACC 
TCTCACTGCC TCTTCGGAGG CCAACCGACG CCACACATTG ATTTTGAACG GCACGATCAG 
AGAGGGTTCA TAGGGATAAG TGAGTACTGG TATACGATGC AGCATGTGTT GGGGGTAGGA 
GGGGTATGGG ATTGGGGAGA GTGGGAAAAG GGGATGAAGG AGTTTTGTGG GAAAGAGTGG 
GGGTTAATTA AGGGTGAAAT GGAGAACGGG GATTGGGAAG ATGTTAATGT ACGTTATTAT 
TCCTTCCTAA TTTTTTTCCT TGCTTTCCCG TCTCTTGAGC AAAACAGAGG GGGGGAAATG 
AATCGAATAA ACCGATGAGA TGAGCTGACA ATTCTTTTTT TTCGTGGATC TTTTTTTTTT 
AAAGATGGAC TCGACAAGAT TAGAAATGCA ATGTTTCAAA GGCGCCTGGA TCTCCAACGT 
TTTACACGAA GGGATCGGTA TCCCCCGATT AGTTGATGTA GGCGGGAACG ATACACTCAC 
CGGCGGATCG TTGGGCGATA CGAACGCTGA AGCTGAACGC CGGGCCCGTG AAAAGGGTCT 
GTTCGAGGGG AGCGGGCAAG AACAAGGGAA ACACCATTTC CAAAGTATGG ACCAAGTTGG 
GGAAACAGCC ATCTCTTGGA CACTCGGTAA GGTCGTGATT GAAGCATCGA AAGCCGTCCA 
ACCTCGATCG CAAGAAATGG AAGGGTGGTG GATGCATCAT CTCAATCTCG GGTCCATGCG 
ACTGCCGTTA TCATTACCTA TACCGAAACA CCTAGAGGGA AAGCTTGAGG ATCTAGGATT 
GAGTGCGGTG TGGGTTTATG CGGTGGTAGC GTTCTTTCTG GTGGGGATGC TCTTCTCTCG 
TTCTAATCGT CGGAGGGGGG TTGGTTCATC GGGGTCTGGG ATGGGGAGAA GGAGAAAACC 
AAGTTTGTCG TCACCGCCTT TACCTGCACG ACCGTGGTTC ACTTTCCCTT CTTTCTTCTC 
TGCCCCCCCC GCCGATCCGA GCTTATCGAT CGAAGACGGC CCAGACTCTT CCCCCACGTC 
ATCCACGTCA TCCGCCTCTT TCTCTGGCAG CGGCACCGGT GGTGCTAGTG GTAAATCACG 
TATCGTCCCC GGCCGACTCC GGCTTTGGTC CCTCCGTATC TCCAACACGA TCAACAAATA 
CCTTCCTCCC TCACTTCCTT TTTCTCTTGG CAATTCGAAC CCGAGACAGC GGGGAGGCAC 
ACGTGAGCTT TGGACAGGGA TAGGGTTAGG ATTACCGAGG GCGCGACATA ATTCGATGCC 
CATGATCGGC ATGGGACTGA ATACTTCACC GGGGGCTGGC CTGCTCTCTC CAAGTGGCGG 
TGGTGGTTAC TCACAACCCG GCTCACCTCG TCCAGTCTCT ACACCATTCT TCAGCTCCGT 
CGCTGCTCCA GGAATCGGTG GCCTCAATAT GGGTGTAGGC AGTCTTACAC CAGAAACAGC 
TCTTACAGGC ATATCAAGCG CCACATCTGT CTCACCTTCT CCGAGCCTCG CATCTACTTC 
TTCGCCGCCT CCACCTAGGA GCAGTTTGAA ATCTGGCAAG TCTGGTCGAC CTTTCAAGTC 
GAGGCAGAAT TCAAATAATC TGCATCCACA CCATGGACCG CATGGGCTTC ATTCCGTTGG 
GGAAGGTATA GGTTTAGGAG GGGGAGGGGC AGGGTGGAAT GATCCGCCTT TGGCCATGTT 
AAGCGGCCCC AGTTCGGGCC CAGGTCCAAG TGGGAGCGGA GCGGCAGATG ATGGTGGAGT 
GTTGACGCCG ACGGCGAATG GAGGGTTGAG TAATGGTGCA TTGTCGAGGA ATTCGAGTAG 
GGCGAATCTG AGTGAATTGG GGTTGGCGCA ACGGTCGATG AGTAGAACCG GAACGCCGGG 
TTTTGATTGA CCTCTTTAGG TGCATGATAT AATACGGACA TTCAGGGTTG TTTTGTTGTT 
GGAAAATGTT CATCTAGCAC CCCAAATATA TACATATGCA CATC 

 

Protein sequence

MAPSVTPLTT HYALVIDAGS SGSRLQIYSW RDPDLERAEI LQDVKNIERQ GSSSSSRGGG 
RWWWDGEDGW KGKGKGKGKE MEEMALRRLV RVGKGVEGDD WMKRVEPGIS TVDPDNIPEY 
LAPLLTHALQ HIPPSVHSST PIYVLATAGM RLLPSQQRDA ILQATCDTLR NDYPFLVPGP 
TEEGPCGENV RVIDGEEEGI WGWVAVNYLM DGFGHAPSPS SISNPGTSSS SSTNLLPLAP 
LASAPPDSSS SSITPVDIAH HSPTFGFLDM GGASTQLAFS PSASELLTSG FPLDKLRTVS 
LRLLSGEQVD WPVFVASWLG FGTNRARERY MTSLYEEWAA AHPSPSAQDL ATPIPDPCLP 
KNLTITPSLS SQPPLIGTGS FPECLTSLHP LLEHSTPCPT SHCLFGGQPT PHIDFERHDQ 
RGFIGISEYW YTMQHVLGVG GVWDWGEWEK GMKEFCGKEW GLIKGEMENG DWEDVNMDST 
RLEMQCFKGA WISNVLHEGI GIPRLVDVGG NDTLTGGSLG DTNAEAERRA REKGLFEGSG 
QEQGKHHFQS MDQVGETAIS WTLGKVVIEA SKAVQPRSQE MEGWWMHHLN LGSMRLPLSL 
PIPKHLEGKL EDLGLSAVWV YAVVAFFLVG MLFSRSNRRR GVGSSGSGMG RRRKPSLSSP 
PLPARPWFTF PSFFSAPPAD PSLSIEDGPD SSPTSSTSSA SFSGSGTGGA SGKSRIVPGR 
LRLWSLRISN TINKYLPPSL PFSLGNSNPR QRGGTRELWT GIGLGLPRAR HNSMPMIGMG 
LNTSPGAGLL SPSGGGGYSQ PGSPRPVSTP FFSSVAAPGI GGLNMGVGSL TPETALTGIS 
SATSVSPSPS LASTSSPPPP RSSLKSGKSG RPFKSRQNSN NLHPHHGPHG LHSVGEGIGL 
GGGGAGWNDP PLAMLSGPSS GPGPSGSGAA DDGGVLTPTA NGGLSNGALS RNSSRANLSE 
LGLAQRSMSR TGTPGFD