| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CNF00170 |
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| Symbol | |
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| ID | 3258339 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_006691 |
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| Strand | - |
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| Start bp | 52871 |
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| End bp | 54847 |
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| Gene Length | 1977 bp |
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| Protein Length | 516 aa |
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| Translation table | |
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| GC content | 49% |
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| IMG OID | 638257138 |
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| Product | expressed protein |
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| Protein accession | XP_571286 |
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| Protein GI | 58268260 |
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| COG category | [I] Lipid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG1597] Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | CTTCAAGATT GAGCATGTCA GGGAATCAGA AGCAGCCATT ACATATCATT GTCAACCCCG
CCGCGGGGCA GGGAAAAGGT CCAGCTTGTA AGCCCTCCCT CTTCCATCTT GAATGCGTAT
CTAACAATCC TTTTCTTTAT TTACTATTCA TTTCTCCTGC ACCGCTCCAC CCACATGACA
TTTGGCCATT TATATCAGTC CTGGATGAAC ATATCATCCC CATCCTCAAC CACTTTCGAC
AGTCTTACAA AGTGTACCCC ACAACTGCGC CGCTTCATGC TGGAGAGATA GGGCGGTCGA
TCTTGGATTC GCGCCGTGAG CTTGGAAAAG GCGGTGAGCC TGTAGTAGGT GGAGAGAGGG
ACGAGCCGAA TGTAGTGATC ATAATAGGCG GTGATGGGAC GGCGCACGAG TTGATTGAAG
GTGTCACTGT TGATCAACAA GCAGAGAATG AAGATCAAGG ATGGGGACGT TGGGAGCTTA
TTGTGTTACC TTTCGGGACC GTAAGTTTTG TATCATTATA ATGTCATATG GAAGCCAAAT
TGAAGCTGAC ATATCGCCTA TTTCTATAAT CTACCAAGGC AAACGCGCTT TATTACTCCC
TCTTTCCCCC TAGCGACCCT TTGCCGGATA CATCTATCCT GTCTTCCCTC CCTTACCGAC
CTTCACCGGA GGTGACCGCT CAAATTTTGC CTCTGGTTTC ATTTTTGAAA AGGTCGACGT
CTCCGCTTCC TTTACCAATT ACACTCACCA CTCTTTTACC GCCCCCATCC CCGCCCCACG
ACGTGGCCCC TAAAACAAGC CGAAACATCA AACCGATCCC GACCCATGTA GTCCTTTCAA
CTTCCCTCCA TGCTGCGATC CTCGAATCTT CTGAGAAACT TCGGGAGACG CATCCGGGAA
ACGAGCGGTT TCGGATCGCG GCGCAGGAGA GTATGGGCAT TTTCTTTGAC GCGAGCGCCT
GGCTTTTTGG TTCAGGCTCT AAAGTCGGAG GAGAAGAAAG GGTGAAGGTG GATGTGGAGC
AGTGGGATCC AAGGGTGGGA AGCTGGGTGA AGCCGTTTAC GGAGCACCGC GCACTTGTTG
ATGAGGGTGG AAAAAATGGA AAGGGCATAG AATTGCAAGG TCCATTTGCG TATTTTACGT
CTACCGCTAC AGTCAGTCGG TTTGAGCCCG CTTTCGTCAT TTCTCCACTT ACTTCCCTCC
GCCCCCCTCC CTCCCAGCAA ATCCAACAAG ACAAAAACGC AGATGGTGAG GGATCAAGAG
ATAATAAGAA TGAGTACATT TACATCACTG TCCTCCGGCC TTTACGCGAT CCATGCGTCC
TCTCCACTTT CCCTGCCTCG TCTGGCAGTG ATCAATCCGA ACGACCAGAC CGAGGGGATC
GAAGCGAAAG ATGGGCAAAA AGGGCACACG AAGTGTTGGG AAAAGCGTAC CATAACGGGG
CGCATATCGA TTTGACGTAT CCACTCAACA AGGGGGAGAA CAAGGGCAAT GTATCAGGAG
AAGGAGATGG AGAGGAGGGT TGCGAAGCAG AGGTAAAAGG CCAAGGAGAA CCAGTAGTCG
AGTTATACCG CTGTGCAGCC TTTTCATGGA AGCCTACCGC CATTACCCAA ACCGACAGAA
CCAAAGAAAA AGGGAGTGAG AGGGCGAGAC TAGTTTGTGC GGATGGGGCG ATACATCGGA
TCCCCGAGGG AGGCAAAGCG GAGGTGGGAT TAATGGTACC GAGTGAAAAA GGGGGGTTTT
ATGTTTGGGC ATAATACTAA CAGGATGCAG GGGAGGCAGG GGGGTTTGTA TACAGAAAGC
GCCGGTAAGC AGGAGAGGAA GACTGGTTTA TTGTACATAA AGAAATAGAG GATATAGAAT
AAATAAGAGG AATTAATTTG TAGGTATGAA GGGTACGTTT ACATGAAGTT AGGGTTAGAA
TAGATTCTTT TTCAGCGAGT AACTAGTCCC AATTTATCTA TTCTCTTCCG GATGTCA
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| Protein sequence | MSGNQKQPLH IIVNPAAGQG KGPAFLDEHI IPILNHFRQS YKVYPTTAPL HAGEIGRSIL
DSRRELGKGG EPVVGGERDE PNVVIIIGGD GTAHELIEGV TVDQQAENED QGWGRWELIV
LPFGTANALY YSLFPPSDPL PDTSILSSLP YRPSPEVTAQ ILPLVSFLKR STSPLPLPIT
LTTLLPPPSP PHDVAPKTSR NIKPIPTHVV LSTSLHAAIL ESSEKLRETH PGNERFRIAA
QESMGIFFDA SAWLFGSGSK VGGEERVKVD VEQWDPRVGS WVKPFTEHRA LVDEGGKNGK
GIELQGPFAY FTSTATVSRF EPAFVISPLT SLRPPPSQQI QQDKNADGEG SRDNKNEYIY
ITVLRPLRDP CVLSTFPASS GSDQSERPDR GDRSERWAKR AHEVLGKAYH NGAHIDLTYP
LNKGENKGNV SGEGDGEEGC EAEVKGQGEP VVELYRCAAF SWKPTAITQT DRTKEKGSER
ARLVCADGAI HRIPEGGKAE VGLMVPSEKG GFYVWA
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