| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CNF00100 |
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| Symbol | |
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| ID | 3258073 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_006691 |
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| Strand | - |
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| Start bp | 26337 |
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| End bp | 30166 |
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| Gene Length | 3830 bp |
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| Protein Length | 1037 aa |
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| Translation table | |
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| GC content | 48% |
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| IMG OID | 638257129 |
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| Product | 3' tRNA processing endoribonuclease, putative |
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| Protein accession | XP_571461 |
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| Protein GI | 58268610 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1234] Metal-dependent hydrolases of the beta-lactamase superfamily III |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0118695 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | CAGTTCCACA ACTACATCTA TACAACATAT CGTTATTCAT TCTGCTGTCT TCACGGTTAA
GACAAGGCGC ACGTCGCCAT TTTACTACAT CATCAAAGAT CATGGCCAGT GCAGAGACTT
ATCAGCCGAA TTGGGCTGTT CGAGCAGTAA CCACACCAAC AAAAGACACC GACCTCTGTC
TATATGTCTC TTTCGATAAC GTTCGCTTTT TGTTTGGATG CGGAGAAGGA ACACAAAGAG
CATTTGCACA GAAGAAAATT GGCTTCTCGA GACTGGGGGG TGTGTTTATT GGAAGTGGTG
AGTTGAAAGG AAGAGGCGGG TTGCCTGGTA AGTGGATTCG TGTGTATAGC AACGGACGCT
CTTCTGACCT ATCCGCAGGT GTTTTGATGT CTGCATCAGA TGCAGGTCTT TCAAAGATAG
ATGTTGTTGG CCCTCCGGAC ATATCTCAGT ATTTAGCGAC TTTACGATCA TCCGTCATAC
GGTTCGTCCT CTGTTAGTCC AGCCGATACA TGTCACTGAT AACTCTTATT TCGCAGCGAA
AATTTGACGG TTAACGTCAT TCCATACCCA AGGGACGTTA CTCCTGGTAC ACCGGTGAAG
CTTTATGAGT CGAGGAATAT AACCGTGCAC GGTGTTGCCC TCATTCCTAC GTTAGACCCG
TTTTCAGCCA CTGAGACCAA TATGGTCTAT CCTCCCTACG ATCCCTATTC TGCCACATTC
AATCCCAGTC ACTTGTCGCC CGCTGATCTG CAAAAATGGT GTGATCATAT TGTCCGGGAT
ATGTTTCAAA ATAATGCACA GGCTCGTCTT TCAAAACGAG CGCCTTCTGC TACTCCTTCA
CCTTCGACAT CCCCTCGATT AGGCTCTCCG ATTGGCTCGT CCAAGAGGCC GCGAACAAAC
AATGTCTTTC TAGCGCCGGA TGGCACCATA AACGCTGCTC GTCCTGATCC CCGAGCTCCT
CTGCCCTTAC CCTCCGATTC CGACGTCGAG ACACAAATGT TGTATATTTG CCAAGCCCCA
GATGTTCGGG GTAAATTCGA TGTCGCGAAA GCGAACACTC TTGGAGTACC TAATGGCCCT
TTGAGAGGGA AGTTGACAAG GGGTGAATCG ATCGAAGTGC CGGATCCAAA TGTGGATGGC
GGGACAAGGG TAGTAATGCC TGAGGATTGT TTGGTTGGAG GAGGAAAAGG AGGGACCCTT
GTCATTGTAA ATTGTACAGA AAAGACATTG CAAACGTTAC TTGATGGTGA CGCTTTGCAT
AAATGGCAGA AGGAGACGCC AACTGGGGAA AGAGAAGGTG AGGGAGGGAT TGATGTGATG
GTACACAGAG TGCCAAGAAG TGTTTGGGGA GACGAACGAT ACCAGGCTTG GATGCAATCT
TTTGGAGAGA AGACGAAAGT AGGCGTCCAC GTAGTGTATT ATGAAGCAAT ATTAAGCTGA
CCATGTTTTT GTAGCATCTA ATAGCGAATA CAACTCCTGC TATCGATCAT ACCGTATTCA
ACTCTGCCGC ATGGAACACC CTCCACCTTT CTCTAATCGA GCCTACAATC TTCCACCCAC
CATTCCTTCG CCATGCTTCT ACTTCATTTC CCAGCTTTGA ATCCAATTTG CCCTCCAACG
TCACCTTCAT TCATCCGAAT GACTTTGTCA AGATGTATCC TCCTTCCCCA CTAGAGACAT
TCCCGTGGCA TGAGAAGGAT TTACCTTTCA CTGTCACTGA AAATCAAGCG GACGATGCAA
GGGAGAAAGT AAAGAAAGAG AAAAAAGATT ACGATGTAGT GTGTGAGAAG GCTAGGAGCA
TCGTCCGGCA ACTCGACATG GAAAAGGCGA AGGCAAAAGA GACGGCTGAT GAGGATGAAC
AGAGTGATGA CATCGTAGTT ACAACTCTTG GCACAGGCTC AGCCATCCCT TCTAAATACC
GCAACGTCTC CTCAACACAT CTGGCCATAC CATCCCTCGG TGGTATACTC CTCGACGCCG
GGGAAGGTAC TTTGGGACAG CTGAAAAGAA GGTTTGGCGA GGGGTTGAAA AGTATCTTAG
AAGAACTGAA GATGGTATTT GTGAGTCATA TGCACGCCGA CCATCATTTG GGAATGAACG
CCGTACTAGA AGAGAGATTC AGAGTAAGTC CTTGTTGCGC AATCGCATTT TTCTCCGTTC
ATTTCCCCAT TTTTTTTTTT GGCTGACGAT TTCTCTTTCT CTCGTTTTCG TCATTTCTAG
CTCGGCATCA ATACACCTCT TTACATCATC GCTCCTTATT TGATTGCTCT TAACTTACAA
GAAACGGCCA CTTGGCAAGC CGTGGGGGCA GAGAAAGGAC TGAAGAATGT TAGGTTTTTG
TGTGTAGAAA GATTAGGTGA GAGGATGTCA GTGGATGTCA CGGAAAAGGA TAGTTCTCAG
AAGGTCGAGT GGAGGCAGAT GGAAGGGGGC GGGAAGAGAA GATGGCCATT TGTTCCTTTA
CATGGCTTCT CCGAGTCTGT GTGAGTTATT TTTGTCTCAT GTTCAGCCCT TTTTCATTTA
TGCTGATCAA AGCTTATCGA CTAATCGATC CACATCTGTC GTCACCTTAA ACTCCCGTAT
TAACTCATTG TCCGATGACA CACCTATAAA TAATGTTACT CATTGACTTT GTGGCTTGTC
TCATCCCCCT CCATATCGCA CCATCGTATC CGACAATAAC TGGCAGCTCC AAGATTCAGA
GGCTTTACCT CCGCCAACTA TTCGCTGACC TGGGTCTCAC CGCCATCTAT GCGCCCTCCG
TACCTCACCG TGGACGAGCT TACGGTCTCG TCCTCGAAGG CGCTCCTACT GGCAAAGACG
GGTTGAAGGG GAAAGGATGG AAAATAGTCT ACTCTGGCGA TACTAAACCC TCACAAAAAC
TTGTCGAAGC TGGCAAGGGC GCGACACTAT TGATACACGA AGCAACACTC GAGGATGATA
AGCCAGAAGT GGCGGCGGTC AAGGGGCATA GTACATTCTC GCAGGCGATC GACGTTGGGA
AGGAGTGAGT GATTTTTCTT CTAACTCCAT CTGTGTCGGG CACAGATGTT TTGTAAAAAG
TTACTTACGA TGCATGTAGA ATGAGAGCCA AGTATATTCT GCTCAATCAC TTCTCTCAAC
GATATCCTAA ACTGCCAAAG TTGCCCATGC CGACATCTGT CGTGCCTGTC GTCGAAACTC
CCCCCACCGA GTCCATTAAC GCTGAACCAA ATGCCATTTT CGGTGAGAAT GCGACTTTCT
CTGCCTCCTC GACCAGCTTG CAAGTTTCAA CCGAACCTAT TGTATCAATC TCATTCGACT
TCATGTCCCT TCGCCTAGGT GACATGTGGA AAATGCCCTA CTACATGGAA GGTTTGTCAA
TGTTGTTCGC CGAGCCGGAA GATGGAGAAG ATGTCGTGAA CGCAGTTCAG ACGACTGAAG
GCACAGGCGT AGATGGAAAA GAGGGAAATG AGAAAGGAGG AAATCAGGGT AAAGGAGACG
GGAAAGAGAA GACGGTTGCC AATGTGAGTT GGGGGGGGAA TAATGCTAGT CCTGTGGTAG
CGAAGCCTGC TTCAAAGTCA AAACGGTCCC TCAAAAAAGA AGCTGCAAGA GCGGTCAAGG
CGAAAGCGGA GGAAGAGCGA GCCGCTGCTT CTGTGAGTGG AATAATGGTT GGCGGGATAC
AGAAAGAGGA GAAGAAGGAG AAGAGAGGGG GTAGCCCCGG GTTGGAAGGG CCTGATCGCA
AGAGAAGATC GACGGGCATT GAGGAAAGTG GTGTCGAGGA AGCATGACCA GAGTGTGACT
CATAGCATTT ATCATCTATC ATTAAGCATG TACACAGCAT ATTATTTTCA
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| Protein sequence | MASAETYQPN WAVRAVTTPT KDTDLCLYVS FDNVRFLFGC GEGTQRAFAQ KKIGFSRLGG
VFIGSGELKG RGGLPGVLMS ASDAGLSKID VVGPPDISQY LATLRSSVIR ENLTVNVIPY
PRDVTPGTPV KLYESRNITV HGVALIPTLD PFSATETNMV YPPYDPYSAT FNPSHLSPAD
LQKWCDHIVR DMFQNNAQAR LSKRAPSATP SPSTSPRLGS PIGSSKRPRT NNVFLAPDGT
INAARPDPRA PLPLPSDSDV ETQMLYICQA PDVRGKFDVA KANTLGVPNG PLRGKLTRGE
SIEVPDPNVD GGTRVVMPED CLVGGGKGGT LVIVNCTEKT LQTLLDGDAL HKWQKETPTG
EREGEGGIDV MVHRVPRSVW GDERYQAWMQ SFGEKTKVAN TTPAIDHTVF NSAAWNTLHL
SLIEPTIFHP PFLRHASTSF PSFESNLPSN VTFIHPNDFV KMYPPSPLET FPWHEKDLPF
TVTENQADDA REKVKKEKKD YDVVCEKARS IVRQLDMEKA KAKETADEDE QSDDIVVTTL
GTGSAIPSKY RNVSSTHLAI PSLGGILLDA GEGTLGQLKR RFGEGLKSIL EELKMVFVSH
MHADHHLGMN AVLEERFRLG INTPLYIIAP YLIALNLQET ATWQAVGAEK GLKNVRFLCV
ERLGERMSVD VTEKDSSQKV EWRQMEGGGK RRWPFVPLHG FSDSKIQRLY LRQLFADLGL
TAIYAPSVPH RGRAYGLVLE GAPTGKDGLK GKGWKIVYSG DTKPSQKLVE AGKGATLLIH
EATLEDDKPE VAAVKGHSTF SQAIDVGKEM RAKYILLNHF SQRYPKLPKL PMPTSVVPVV
ETPPTESINA EPNAIFGENA TFSASSTSLQ VSTEPIVSIS FDFMSLRLGD MWKMPYYMEG
LSMLFAEPED GEDVVNAVQT TEGTGVDGKE GNEKGGNQGK GDGKEKTVAN VSWGGNNASP
VVAKPASKSK RSLKKEAARA VKAKAEEERA AASVSGIMVG GIQKEEKKEK RGGSPGLEGP
DRKRRSTGIE ESGVEEA
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