Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CNE05330 |
Symbol | |
ID | 3257684 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Cryptococcus neoformans var. neoformans JEC21 |
Kingdom | Eukaryota |
Replicon accession | NC_006687 |
Strand | + |
Start bp | 1492923 |
End bp | 1493840 |
Gene Length | 918 bp |
Protein Length | 263 aa |
Translation table | |
GC content | 54% |
IMG OID | 638257115 |
Product | conserved hypothetical protein |
Protein accession | XP_571057 |
Protein GI | 58267802 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3836] 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCCACTGT CCATTAATGG CTCTCCTTTG CGCCGAGCTT TGGCGGAAGG CCGACCTGCA CTGGGCGTGA CAATGGTATT GCCAGGTGCC CTTCACGCTA GGATCCTGGC TAGTCTACCC AATCTCTCTG TAAGTAAGCC AACCATGTGG CAGACGATTG CTAACCTAAT CAGTATATTT TCGTCGACCT CGAACACGGC GCGATGAGTG ATACTGAAAT GCAAGCCGCT ATCCAGGCGA TCGTTCCCTT CGGAGTGTCA CCGATCGTTC GCATTCCGGC AGGGGAGCCT TGGATGATTA AAAGAGCACT GGACGCCGGA GCCCACGGCA TTGCTGTCCC TATGGTCTCC ACACCGGTAT GTCCCAACAA TGCTACTGAG CTGATTATTC AGGAAGAAGC CGCGGCGATA GCGTCGGCTG CTCGATTCCC CCCAAATGGA TGTAGGGGAT TTGGCTCGAC ATTCTCAAGG GATGCCTTCG GCTGGACTTC TGATGCTGAA TACCTTGAAA AGGCCAACAA TGAGATCCTA GTCGCCGTTA TGATCGAGAC GAAGCAAGGC TATGAGAATG CCGAAGCGAT TATCAATACT CCTGGAATAG GTGTGTGCAT ATTTCCGCAT GGGGCACGGG GCTGAAGAAG CGACAGATAT CATTATGACG GGAGAGACCG ATATCTGTCT GTCCATGGGA TATCCCCTGA CTCCGGACAA TCCGGCTCAG GAAGTCACCG CGGCCATCTC ACACATCTCA TCACTGGCAC GCAAAGCCAA CAAGTGGCAG GGTGGACGCA TCAGACCTTC AACGGGTGGC CCAAAGGCGA TGGCATCAAG AGGCATTGGT ATGATACAGG TCGGGGTGGA CGCTTGGTTG TTAAGGGAGA CCCTGAATGC GAAGATCACC CAGGCGATGG AAAGCTAG
|
Protein sequence | MPLSINGSPL RRALAEGRPA LGVTMVLPGA LHARILASLP NLSYIFVDLE HGAMSDTEMQ AAIQAIVPFG VSPIVRIPAG EPWMIKRALD AGAHGIAVPM VSTPEEAAAI ASAARFPPNG CRGFGSTFSR DAFGWTSDAE YLEKANNEIL VAVMIETKQG YENAEAIINT PGIDIIMTGE TDICLSMGYP LTPDNPAQEV TAAISHISSL ARKANKWQGG RIRPSTGGPK AMASRGIGMI QVGVDAWLLR ETLNAKITQA MES
|
| |