| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CNE05310 |
|---|
| Symbol | |
|---|
| ID | 3257615 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_006687 |
|---|
| Strand | - |
|---|
| Start bp | 1486184 |
|---|
| End bp | 1488744 |
|---|
| Gene Length | 2561 bp |
|---|
| Protein Length | 758 aa |
|---|
| Translation table | |
|---|
| GC content | 53% |
|---|
| IMG OID | 638257113 |
|---|
| Product | 5-oxoprolinase, putative |
|---|
| Protein accession | XP_571053 |
|---|
| Protein GI | 58267794 |
|---|
| COG category | [E] Amino acid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG0145] N-methylhydantoinase A/acetone carboxylase, beta subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TCAACAACAC ACATCTTACC ATCTACCCAT CATGATCGGC GTCACCTTAA CATCAACCGT
CTCCGACCAC TCCATCCGAA TTGCCATTGA CAGAGTAAGT CACCGACCGT TATGAGCTCA
GCTGATGACA GGGTGGTACT TTCACCGACG TTCACGCGTC ATGGCCTGGT CCCCATGGCC
GTGAAGAGAG CATCACCAAA CTCCTCTCCC AGGATCCTTC AAATTACAAA GACGCACCGA
CAGAGGGTAT CAGAAGAGTG TTAGAGACCG TGCTGGGGAA GAAGGTCCCC CGGGGCAGTC
CATTGCCAAC GAACAAGATA GGTTAGTTCC CACTCGTTTC TTCTATGCTG ACAACATAGA
CACTGTGCGT CTCAGCACCA CCGTCGCTAC CAACGCACTT CTCGAACGCC GCGGTTCGCC
CCACGCTCTC CTTATCACCA AAGGTTTCAA AGATCTTCTC TCTATCGGCA ACCAAGCTCG
TCCACGCATC TTCGACCTGA ACATTAAGAA GGCGTCATAC CTTTATGGCG ATGTCATTGA
GGTCGACGAG CGAGTCACCC TCGTCGGATA CACCTCTGAT CCCCATGCCA CTGAACATGC
AGTCAAATTT TTAGAAAACG GCGAGGCGAT TCAGTCCTAC TCTGGAGAAG GGGTGCAGCA
TGGCGTCGAG GGCGTGAGGG GTATGAGCGG AGAGGCCGTG CAAGTGTTGC AAGCGCTAGA
CGAGGAAGCG GTGGAGAAGG ATCTAAAAGC GCTGTTCGAG CAAGGGTACC GGTCGATTGC
GGTCGTTTTG GCACATTCGT GAGCTTCCTT CAATTCATCG TTTTCCATTA GGCACTCGAC
TGAAGTGTCA CAGGTTCACC TTCCCCGACC ATGAGCTCGC TGTTGGTCGT ATCGCGGAGA
AAGTCGGCTT TCACCATATC TCCCTCTCCT CCCAACTTCT TCCTATGATT CGCATGGTCC
CTCGAGGTGT CTCCACAACA GCCGATGCTT ATCTCACTCC CATATTGGGC GAGTACCTGG
ATGGCTTCTA TTCTGGCTTT GAGGGAGGGA AAAAAGGGAA CTTGAACGTC GAGTTCATGG
GCTCTGATGG TGGCTTGGTG GACTTGAAAG TGAGCTTTTC TATGTTGAGT AAGAGTTGAC
GAAAGAACTT TACCGGTCTC AAATCGATCT TGAGTGGACC AGCAGGCGGT GTTGTCGGCT
ATGCCCTCAC CAGCTGGGAC GAGAAGAAAC TCGCGCCCGT TATTGGCTTC GACGTCGGCG
GAACCTCGAC CGATGTCTCT CGCTTCGACG GCAAGTACGA GATTGTCTAC GAGACCACCA
CAGCGGGCAT CTCAATCCAA AGCCCTCAAC TCGACATCAA CACCGTCGCA GCGGGTGGCG
GTTCCTGTCT CACTTTCCGC AACGGCATGT TCCACGCTGG CCCTGAGTCT GCCGGTGCAC
ACCCGGGTCC CGCTTGCTAT CGTAAAGGCG GTCCCCTCGC ACTCACGGAT GCGAATCTCA
TCCTCGGTCG GCTGGTACCT CGTATTTTCC CACAATGTTT CGGGCCCAAC GAGAACGAGC
CCCTTGATCC GTCAGCTTCT CAAGCTTCAT TCGAGAAGAT GCAAAAGCAG ATCGCTCAGG
AGACCGGCGC GGAGATGTCG CTGGACGATA TGATCTACGG ATTCGTCACT ATCGCGAACG
AGATGATGGC TCGGCCAATC CGAACGCTTA CCGAGGCTCG AGGTTTTGCG ACTTCCAAGC
ACATTCTGGC GTCTTTCGGC GGTGCTGGTG GTCAACATGC ATGCGAGATC GCCGAGAGCC
TAGGTATCAC CAGTATCCTG ATACATCGCT ACTCCTCCAT CCTTTCAGCA TATGGTCTCG
CCCTCGCAGA TCGAGTGTAT GAAGAGCAGG AGCCATGCTC TGCCATCTAC CATCCATCGT
CGTTATACTT CACCGAGCGA CTCGACAAGA TCGGTAATCG CGTTTCCGAG GAGCTCGCAC
GACAAGGCTT CACCTCCGAT CAAGTCAAGC TTGTGAGAAT GCTGCACATG CGCTTCAATG
GATCGGATAC GGCACTTATG ATCTCTGAGC CAGCAGATGG CGACTTCGAG CAGGAGTTTT
ACCGGGTGTA CAAGCACGAA TTTGGTTTCC TGCTCGAGAG CAAGGTTATT GTAGATGACT
TCAAGGTGAG TCTCACGCGG TTCTAGTCAG GATGGAAGGC GATGGCTGAC ACTCGTCGCG
ATGCAGGTCA GAGGTATCGG CAAATCCCTC TCTCCTGCCG GTGAATCCGT GTTCTCAGAA
ATATCGAACC TCTCCACTCG CCGCGCTGGC AAGCCCACAT CCAGACAAGA AGTCTTCGTT
TCTCAACCTG GGTCGACCAA GGGTGAACGC ATGGATACGC CGGTATACGA GTTGGACCAG
CTCAACGTTG GAGACATCGT TGAGGGGCCA GCATTGGTCA TCGACGCGAC ACAAACTATC
TTTATTAACA TCACTTGGAG CGGGACGGTC ACTTCTAGGC ATCTGCTCAT CACTCGCCCA
GCATCAGCGC AATGATGAGA CTATTGTAAA TTGTATAGAT T
|
|---|
| Protein sequence | MIGVTLTSTV SDHSIRIAID RGGTFTDVHA SWPGPHGREE SITKLLSQDP SNYKDAPTEG
IRRVLETVLG KKVPRGSPLP TNKIDTVRLS TTVATNALLE RRGSPHALLI TKGFKDLLSI
GNQARPRIFD LNIKKASYLY GDVIEVDERV TLVGYTSDPH ATEHAVKFLE NGEAIQSYSG
EGVQHGVEGV RGMSGEAVQV LQALDEEAVE KDLKALFEQG YRSIAVVLAH SFTFPDHELA
VGRIAEKVGF HHISLSSQLL PMIRMVPRGV STTADAYLTP ILGEYLDGFY SGFEGGKKGN
LNVEFMGSDG GLVDLKNFTG LKSILSGPAG GVVGYALTSW DEKKLAPVIG FDVGGTSTDV
SRFDGKYEIV YETTTAGISI QSPQLDINTV AAGGGSCLTF RNGMFHAGPE SAGAHPGPAC
YRKGGPLALT DANLILGRLV PRIFPQCFGP NENEPLDPSA SQASFEKMQK QIAQETGAEM
SLDDMIYGFV TIANEMMARP IRTLTEARGF ATSKHILASF GGAGGQHACE IAESLGITSI
LIHRYSSILS AYGLALADRV YEEQEPCSAI YHPSSLYFTE RLDKIGNRVS EELARQGFTS
DQVKLVRMLH MRFNGSDTAL MISEPADGDF EQEFYRVYKH EFGFLLESKV IVDDFKVRGI
GKSLSPAGES VFSEISNLST RRAGKPTSRQ EVFVSQPGST KGERMDTPVY ELDQLNVGDI
VEGPALVIDA TQTIFINITW SGTVTSRHLL ITRPASAQ
|
|---|
| |