Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CNE05180 |
Symbol | |
ID | 3257831 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Cryptococcus neoformans var. neoformans JEC21 |
Kingdom | Eukaryota |
Replicon accession | NC_006687 |
Strand | + |
Start bp | 1453740 |
End bp | 1456109 |
Gene Length | 2370 bp |
Protein Length | 519 aa |
Translation table | |
GC content | 51% |
IMG OID | 638257101 |
Product | hexose transport-related protein, putative |
Protein accession | XP_571045 |
Protein GI | 58267778 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR00879] MFS transporter, sugar porter (SP) family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.900345 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | TGTTTGCTTT GCATCAGAAC AGGTGAGAGC CAAAAAAAGG GCAACACGCA AATCCAACAG CGAGCTGCCA CCGAACAAGG ATATTGAGAT TCCGACCGAT GTGAGAGGTA TAAGAAGTCC CATATCTGCC CCGTGGTGTC CCATCTCCCC ACCACAGTTT GAGTTTCGAG TCTAGCGTAA CAGCATGTCT ACCAAGTTCT CTGATCTACC CAACAACACT GCCTCAAAAT GGTGGAAGGA CCCAGGTATG AGGAAGAGTG AGTTCACCCC GGCAAGAAGA TCTGATTGAA GGCCCATGAC TGACAACCAA GATAGGCTTT GTCCATATTA TTACACTCTA TACCGCCGTG TCAGCATGAT CGACTTCCCT GCTATACTGC AATGAGTCGA AAGGCTGACG CAATAATGCA GCTACTCTTT AGGATATGAT GGGTCCCTTC TCAACGGTCT TCAAGCGCTC ACTGAGTGGA ACACAGACTT CGTAAGTGGC GCATCGCTCG GAGCAGAGTC GATCGACTGA CGCCCCACTC CCTACAGGAC ACGCCTACTG GAACTCGACT TGGTTTGATT GCTGCCAGCT ACTACTTGTG AGCTAAGACT GGGCCTTGAA ACGACCATTT AGGTAGAGTT GACTATTTAT CGGCAGGCCC AAGATCCCTC TCACATTCGT CATTGCTTGG ATGGTTGATC GATATGGCCG AAAGATCGGA CTTGTAAGTT GTACCTGTCT TGCAAACACT TGTACTCGCT GCTGACTTTC GCATTTACAG TACTGTGGCG CCCTCTTTAT GTTTGCTGGC GCTCTCTTGG GAGGTTTCTG TCACTCCACT GCTCAGCTTG TGGGCTCTCG TGTTCTTTTG GGTGTGGGAA CTGCTTCTGC CCGTATGTGC GCCCATATCA TGTCGAGCAG CTCTTGGGAT TCGCTAACGT CAAACGCATC AAACAGAGGT GACTGCTGCT GCTCTGGTTC CTGAACTTGC TCATCCTCGT ATACGACATT ATGCTGGTGG TTTCCTCAAC ACGACTTACT ACGTGAGTCG CGGTTCCATA CCGAGCATAG GATCACGCTT CATGCTGAAA TCAATCTGTA TATGCACAGG TGGGTTCCAT CTTCGCCGCC TGGCTCACCT TTGCGATGGT TTACTACCCC GGGACCAGCT CATGGTCTTG GCGAGTGCCC ACCCTTATCC AAGGGTTTGG TCCCCTTCTT CTTGGTTTAG GAGCATACTT CATCCCCCAG TCGCCTCGGT GGCTTGTCAA GAAAGGGCGT GTTGGCGAAG CGCACCAGAT TTTGGCGACT TATCAGTGAG TATTCTTCAA TGTGCGATCA GATCCCAGCA ATAGTCCCCT CTCAAACCTC AGCATCTGGC ATCGCTCTCG CTTGGCATGC TTCGTTGACT GGATCTTCAT GCTGATGATA TGGGTACAGT GCCAATGGCA AGATGGATGA CGAGCTTGTC CTCCTCGAGA TGCGAGAGAT CAAATCTTCC GTTGAACTTG AGAAAGTGGC TGAATCTGCT TCATGGCTCG CTTGGTTCCA CACCAAAGGC AACCTCCGGA GGTTCTTCGT CATCATCATC CTCGGAACGG CAACGCAATG GGTTGGCAAC GGCGTCGCGC AATACTACCT GGTTCCTGTG CTCAAGACTG TGGGCGTCAC CAAGCCCGCG CAGACCACAG GCGTCAACGG AGGACTTGCG ATTTGGAATT GGTTCATCTC TATGAGTGGG GCCAGTCTAG TGGAGAGATT CGGACGAAGA CCCTTGTTTT TGACATCGAT CATTGGTATG TTCTTCTCGT TCGTCATGAT CCTCGGTCTT GCAGGTGGTT ACAACACCAC CCACCATTCC ACAACGGGTA TCGCAATGAT ACCGTTCATC TTTATTTTCA TGGGCTTCTA CTCCCTCGCC CTGACCCCTC TTCCGATGCT CTACGTCCCC GAGATCTGCC CGCTTGCCCT CCGCGCCAAA GCCGCGGCAT TGCTATTGCT AGCCCAAAAC TGCGCACAAA CCTTCAACCA ATTCGTCAAC CCGGTCGCCC TCAGCACCAT CAGCTGGAGA TACTATGCAG TCTACGTTGC GGTCGACGCG ATCTACATCG CCCTCTTCTG GTTCATGATA CGCGAGACCA AGGGTCTTAC CACAGAAGAA GCTGCTGTCG TGTATGATCC CGATGATGTC AAGGAGGCCA ATAAGGAGGC CGAGAAGAGG ATGTACCAGG ATGCTATAAA GGTGGTTCAT GTGGAACATA TGGAGAAGGA GGAGGATTTT AAGGAGGAGT TTAAGGTATA GACCATTTTC AGGTGTGTCG TATTGGTATT CATAGTGTCA GAGGACCTTA AGCGTTGTAG TACTTCCATG TTATGCACAG
|
Protein sequence | MSTKFSDLPN NTASKWWKDP GMRKSFVHII TLYTAVYSLG YDGSLLNGLQ ALTEWNTDFD TPTGTRLGLI AASYYLPKIP LTFVIAWMVD RYGRKIGLYC GALFMFAGAL LGGFCHSTAQ LVGSRVLLGV GTASAQVTAA ALVPELAHPR IRHYAGGFLN TTYYVGSIFA AWLTFAMVYY PGTSSWSWRV PTLIQGFGPL LLGLGAYFIP QSPRWLVKKG RVGEAHQILA TYHANGKMDD ELVLLEMREI KSSVELEKVA ESASWLAWFH TKGNLRRFFV IIILGTATQW VGNGVAQYYL VPVLKTVGVT KPAQTTGVNG GLAIWNWFIS MSGASLVERF GRRPLFLTSI IGMFFSFVMI LGLAGGYNTT HHSTTGIAMI PFIFIFMGFY SLALTPLPML YVPEICPLAL RAKAAALLLL AQNCAQTFNQ FVNPVALSTI SWRYYAVYVA VDAIYIALFW FMIRETKGLT TEEAAVVYDP DDVKEANKEA EKRMYQDAIK VVHVEHMEKE EDFKEEFKV
|
| |