Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CNE05160 |
Symbol | |
ID | 3257631 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Cryptococcus neoformans var. neoformans JEC21 |
Kingdom | Eukaryota |
Replicon accession | NC_006687 |
Strand | + |
Start bp | 1446296 |
End bp | 1449453 |
Gene Length | 3158 bp |
Protein Length | 563 aa |
Translation table | |
GC content | 48% |
IMG OID | 638257099 |
Product | expressed protein |
Protein accession | XP_571043 |
Protein GI | 58267774 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | CTTATTATTC GTCACACCAT TCCGACCTCG TTCAAATAGG GCAGTTATAC ATGTACTTGG ATGTCTGTCC AACCCATAGC AAAGCCCATA ACTCCGACTC CGAAGAAGAT CAACAGTGCG TCTGACCTAT CCTATCTATA CCTCGGTAGC AAGTAGCTCG GCATCTAGCC TTAACGGACA TGATTTTCCC ATTCACTAAC TGGAATAGGT TGCGATGCCT GTCGCTCTAG GAAGGTCCGG TGTGAACGAC TCTTTCAGAC AGAGGCACCA CGACCTGGAC CGTCGGTAGG TCAGCCGTCT CTACCGCCAT GTCGGGTATG TCTAGCTACC TACTTTATCG GAATGTTATG CATTGGCGCT GATGTGGACG AGGGCGGAAA AGCAATGCGC CGATTTGGGC ATTGAATGTA CTACCACCTG GCGACCTAAG AGGGTTAGTG ACCCTTCATC CATTTGATCA ATGTACTTGA CTTAATAACT GTTGGTATAT AGCGCGGACC CCCAAACGAA TATTTAAAGT GAATTCCAGT CCCTGATCAA AGCAGAATTC TATATTGATC ATTCATGGTT GATGATGTGC ACACTAGGAA GCTCATGGCT TCCGATACAG ATAGTCAATC GCATCCGGTC CCCGTCCCCG TACCGATGAC CACCATACCC TCTCTCCCCG ACAGCGCCTC TTTATCGCCA GTATTGCATT CTCCCTTAAA CCGCTACATC CCAGTTTCCC CACTTTCAGC CCGGCCGACC AGCCACCAAC CCCATTCGCT GGAAGATATC ATTGAAAGAA ATGTGGCGAT GTCCATATTT GCGCTCTTCT TCGACTATGT GGGTTTTGAG TGTTTTCTTT CTCGAATCCG AATTTTCTTT TACTCCATTC CAACGGGTGG CCTTCCTCAG GCCCTTCTTC GTCAGACTTC CTCTATGCTG GGGCGGAGAC TTATAGCTTT TTGAACACAG GTACATCCCT TGACGCCCTG CCTTCATCGA CCCACATTTC TAATGGAGGT ACAAACTATG AGAGACGAGA AAGAGCCGGT GTTCTTGGCT TTGGTGTTGA GCGTGTTAGC CTCTGCCATG GTCCAGGTAT GTCCATTTCG GCACATCCAT ATTATCTATT CTCTCCATTC GATCTATCAT AACCTCGAAT TTGCGGCCTG AAATGAACTT CTGATCTCTT GACACAGATA CCCAAACCCT TGTTGCCCAC TATCAACAAT TGCCCGGGGA GAGAAGTGGC AGACCGCTGC TACCAAGTTT CCCGGCTTGT CTCGCTGAAC ACCTACGAAC CGCCGACAAT TGAGATGGTC ATCCTGAGAT TCCTCGATTC GGTGTATCAC ATAGTATCAG GTCGACTAGG CGCTCACGGT ATGTCCCTCG TTGTCTTCCC CTGTATATCG GGCGTAGTGC TGAACTGGGG GTGTGATGAT AGCCGCAAGT TGGGGAGAAG CATTACAGCT CGGTGTATCT TTGGGCATAC ATCGTGAAGC CAGTTATGCT GGGCTAGGTG AGTATTTCTT TAAGTGCTTC AGCTCAGCAA CCTACCCCAT GTCAGTGTTG ACGCTGAGAT GATAGATCCA ATAAGTGCCG AAGTCCGAAG AAGGATGTTT GGTTTGTTAT TCACATCTGA CAAGGCTGCG TGAGTGACCT ATCTTTCTGC GCATCACTCG TCACGTCTAA ACTTACGACG ACCATGGTGA TAGAGCTTGC TTGAGAGATC GGCCAATATT CCTCCCAACG GAAGATTGCG ACACGCTCAT GCCGAAAGCA GTGTACGTAG CCTATTCCCA CTTTCAGTCG GGCTATGCGC TAATTGATTA AGGGACGACG AGTATATCAC TCGTACAGAA TATCGTACTT TTCCGGTCTA TGAGACTTCC ACGATTGCAG GATTCAAGTG AGTCATCTTC CTTTGAGCTT TGATAGGTCA GACAAGGGCT GAAAGAATGT TAGTATCGCT ACAAGGGTCT TTGGGTATGT CTGTGCCAAT TTGATAATTG CTGCCTCGAC AGAGCGAGAC TGATCTGAGT ATTAAGGATC ATCGGAGAAA CTCTTTTGCT ACAACGTACT GTCCGGCGTC AGTCCCCTCT TGCGCCGGAG GACATACTAG CCAGACTCAG ACGAGTCAAA GCCATTTCCG AGGATCTTGC AGAAGTCTTG ATCGACATCC CTGCCGCTCT GAGGTTGGCA GACACCCCAG CTCCCTTGCA GTTACGGTAA GCCGTCTTCA CCTGCTTCTC CTTTCACTTC TTGACATTTC CGCTGATGAA GCTGTCATAG AACCAATACT CAGGATTGGG GTCAAGATAT CTTTGCTCAA TTGGATTTGT ACTTTGCCCA ACCTGAGTCG TCTCGATCAA TCGCCAAAGA ATCATTTTTG GTGCTCAAAG GGAATATATA CGTCACACAC GCTTTGGCAA GATTCGCGCT CATGTGAGTT GAGTCGCCAA CCATTTTGAC CCAAAATGTT TTGAATTAAC GGCATACCGC ACGAATGCTG ATATGCTGTA ATCGGTATTA TAGCGGCTGT AGGGATGAGA TTATGGGGCA AACAAACTCG CTAGGCGGCG TTACTCGGAC TGGTCAGTCT GCGAGGAGTA GGATTGCTGC AAAGAGCAAT GCTGACTCCC TCTCTTGTAT CAGCTACAGA GACGATCGTC ACATATTTGT ACGATACTCT GGATCGATAT GAGACCGTCA TTGTAGATCT GCTCAAGGCG TTACACAGGC AAGTGCCCGC GACAATAAAG CTGGGTCTCC ACATTGTGCT GATGTAACCT CGCAGTATAC CAGTACAAAG TGCAAGTATC ATATTCTCTT CCATCTTGTC TCTTAAAGGC CGAGACAACG ACTAACGTTG GATTACTGCA GCTCGCAGTC AATGGACCGT CACTAGTCAA CAAGATCCGA TATGTCGCCG TATCCCTCTT GGACGCTTTG GATGCCAACA ACCCAGTCAG CCCAGAGGGG GCGTACTTGC TTGATTTCTT AGCCATCTTA TCGGAGATTG AACAGGTGGG TCCAGCGATG CCTTGGGCAT GTTGGTTGAC CACTTCCATC TTTTGCGCTA ATGCCTGAAC AGACTCTATA ATACCTTTAC ATATTGCTTC GAAAGTCACG CCGAGAGAAA GCTTTGATGT ACGCGTGATG ACTCGCGT
|
Protein sequence | MSVQPIAKPI TPTPKKINSC DACRSRKVRC ERLFQTEAPR PGPSVGQPSL PPCRQCADLG IECTTTWRPK RRGPPNEYLK KLMASDTDSQ SHPVPVPVPM TTIPSLPDSA SLSPVLHSPL NRYIPVSPLS ARPTSHQPHS LEDIIERNVA MSIFALFFDY VHPLTPCLHR PTFLMEVQTM RDEKEPVFLA LVLSVLASAM VQIPKPLLPT INNCPGREVA DRCYQVSRLV SLNTYEPPTI EMVILRFLDS VYHIVSGRLG AHVLQLSNLP HVSVDAEMID PISAEVRRRM FGLLFTSDKA AACLRDRPIF LPTEDCDTLM PKAVDDEYIT RTEYRTFPVY ETSTIAGFKI IGETLLLQRT VRRQSPLAPE DILARLRRVK AISEDLAEVL IDIPAALRLA DTPAPLQLRT NTQDWGQDIF AQLDLYFAQP ESSRSIAKES FLVLKGNIYV THALARFALI GCRDEIMGQT NSLGGVTRTA TETIVTYLYD TLDRYETVIV DLLKALHSIP VQSLAVNGPS LVNKIRYVAV SLLDALDANN PVSPEGAYLL DFLAILSEIE QTL
|
| |