Gene CNE04840 details

Gene Information

• Locus tag: CNE04840
• ID: 3257959
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Cryptococcus neoformans var. neoformans JEC21
• Kingdom: Eukaryota
• Replicon accession: NC_006687
• Strand: +
• Start bp: 1352332
• End bp: 1354371
• Gene Length: 2040 bp
• Protein Length: 466 aa
• GC content: 48%
• IMG OID: 638257068
• Product: conserved hypothetical protein
• Protein accession: XP_571003
• Protein GI: 58267694
• COG category: [G] Carbohydrate transport and metabolism
• COG ID: [COG2814] Arabinose efflux permease

Plasmid Coverage information

• Num covering plasmid clones: 28
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GATGACAACA ACAATCGTCG CTCTTCAAAA TGCCATATCA CATCGGGTCT CCGGGGGCTT 
TGAGAGATAA ACCTAAAATA TAGCGAGAAC GACGACATAA CCCCTTGCGT AGTACAGCAT 
GATATCGTCA CGCATGCGTT TCCCCAGCGA AAGCGATCAG GGCTCAAGCG ATTGATCTTA 
CGGCTACCCC CCGGTTTCTT CAATTCTCCC AGAAGATCCT GTCCCAAGAT GGCGGAGCCG 
CCTTATACTA CCTTCACCAA ATGGCAAAAG CTGTCGCTCG TCGTCGTTGC ATCTCTCTCA 
GCCTCCTTCA GTGGCTTTGC ATCTAATATA TATTTCCCTG CTATTCCAGT CATGGCTACC 
TCCCTTGGCA CCTCTATTGA AAACATTAAT TTGACGGTGA CGACGTATAT GATCTTCCAA 
GCTATCACTC CGACATTTTG GGGGTAAGAC GATTGCAATT CAAACGGAAC CTGCAGTGAC 
ATGCTAACGG GTCTTAGTGC CATTTCTGAC GCTTATGGCA GACGACTGGT CCTCATATCC 
ACACTTACGG TATTCTTCTC TGCTTGCATT GGCCTTGCGT TAGTCAAGCA CTATTACCAG 
CTTGTCATCC TGCGGTGTTT GCAAAGTACC GGAAGCGCAA GTACCATTGC AATCGGCTCA 
GGCATCATTG GAGATGTGGC AGACAGGAAA GAGCGGGGAA GCTATATGGG CTTCTTTCAA 
ACAGGTCTTC TACTTCCATT AGGTGAATAC AAGCGTCTGA GTCGCAATAG CTGCTTGGAA 
CTGATGCTAA CCATGAGCAG CTATTGGACC TGTTTTAGGC GGTATTTTTG CTCAAACATT 
AGGCTGGTGG GCCATCTTTT GGTTTTTTGT CATTTACGCA GGGATATTCC TTCTAATTCT 
GGCACTATTT CTGCCGGAAA CTTTGAGGCG TATAGTAGGC AACGGTGCTA TCTACCCTCC 
TGCTCGATCA CGAACGCCTT TGGAGCATTT CCTAGCTTCG AGGGACAAAA CCCTACCCCC 
TATAACTTCA GCAACACCCA TACGACCGGA CTGGATAGCC CCTTTGCGCA TTCTCTTTGT 
ACCTGACGTT TTTTTAACGC TTTCCTTTCT CTCTCTACAT TACGCAACAT GGCAGATGGC 
GATTACAGCC CAATCTTCTC TGTTCAAGAG CATTTACAAC CTGAACGAAA TTGAGATTGG 
TCTTACTTTT ATCGCCAACG GCTTTGGCTG TATGCTCGGT ACTCTTTCAA TTGGTCGGTT 
CCTCGACTAT GACTACCAGC ATTTCAAGAA AAAGTTTTCC GGACCTACAT CAGACTTCCC 
CATTGAGCAA GCCCGGCTTC GTACTGTCTG GTTCTGGTCT CCGTTCCAGT GCGCCGCAGT 
CCTATGGTTT GGCTGGACGT TGGATCAAAA GGTACACATG GCGTCCCCTA TTGTCGCATC 
TTTTGTCCTA GCATGGGCAG CGATGTCCAT CCAAGCCGTT ATTAGTACCT TTATCGTCGA 
CATATTCCCC AAATCAAGCG CATCTGCTAC AGCCGCTCTC AACCTCGCCA GATGTCTGAT 
GGGTGCCGGT GCAACAGCTT CGGTAGAACC GTCGATCAAT ACTTTGGGTG TTGGTTTCAC 
ATTTACACTA TGGGCATGTC TAATGGCATT GTCGTTGGCG TTTGTTGGAG TACAAATGCG 
CTTTGGCCCA GCATGGCGGA AGAGAAGAGA AAAAAGACTT GAAGAAGGGG AGAAGGGCTA 
GGTATCCCGG CCGTCATTAC ATAGAATCAA CGGTCAGAAC GGTATGTGCA AAAAAGGTTC 
AGGCATTAGG TAATCAACCT ATTAAACCTT TTGCCAGACC AACAACGATG CGCTTGATCG 
CAAGCTGTAT ACCATCTCAG CAGCTCAATC GGGCACGACC GCGAGCGAAG TGAAGCTGGC 
ATGATTTAAC TGATCGTATC ATAGGGTCCT CATGATGCCC AAGGAGGACA TTGCAGCTGT 
CAGAGGTTGT CGCTCAGGGA TTAGAAGGAG GGGATGTTTG AAGATTTCCA GGACATACCG 

 

Protein sequence

MAEPPYTTFT KWQKLSLVVV ASLSASFSGF ASNIYFPAIP VMATSLGTSI ENINLTVTTY 
MIFQAITPTF WGAISDAYGR RLVLISTLTV FFSACIGLAL VKHYYQLVIL RCLQSTGSAS 
TIAIGSGIIG DVADRKERGS YMGFFQTGLL LPLAIGPVLG GIFAQTLGWW AIFWFFVIYA 
GIFLLILALF LPETLRRIVG NGAIYPPARS RTPLEHFLAS RDKTLPPITS ATPIRPDWIA 
PLRILFVPDV FLTLSFLSLH YATWQMAITA QSSLFKSIYN LNEIEIGLTF IANGFGCMLG 
TLSIGRFLDY DYQHFKKKFS GPTSDFPIEQ ARLRTVWFWS PFQCAAVLWF GWTLDQKVHM 
ASPIVASFVL AWAAMSIQAV ISTFIVDIFP KSSASATAAL NLARCLMGAG ATASVEPSIN 
TLGVGFTFTL WACLMALSLA FVGVQMRFGP AWRKRREKRL EEGEKG