| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CNE04680 |
|---|
| Symbol | |
|---|
| ID | 3257552 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_006687 |
|---|
| Strand | - |
|---|
| Start bp | 1307991 |
|---|
| End bp | 1309623 |
|---|
| Gene Length | 1633 bp |
|---|
| Protein Length | 438 aa |
|---|
| Translation table | |
|---|
| GC content | 53% |
|---|
| IMG OID | 638257052 |
|---|
| Product | conserved hypothetical protein |
|---|
| Protein accession | XP_571161 |
|---|
| Protein GI | 58268010 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG5347] GTPase-activating protein that regulates ARFs (ADP-ribosylation factors), involved in ARF-mediated vesicular transport |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCGACGA GACAGGGTGA GCAACTAGAT GGCCTGTTTT GGCTAGACAC TGACGGAGTC
TCCCAGACAA ATCCACGACG GAGCGCCACG CGAAGATCCT CCGTGAGCTC GTGAAGCAGC
CTGGCAATAA GAACTGTGCC GATTGCAAGC GAAATGGTGC GCAAATCCAT TAAGGAAGAG
AGAAGGATGC ATTACTGACA ACCTTCCTAA CACCATCTAC AGATACACGA TGGGCATCAT
GGAATTTGGG TGTCTTCCTC TGTATCCGGT GTTCCGGTAT TCATCGTTCA ATGGGGACGC
ATATCAGTAA AGTGAAGTCT ATCGATCTCG ACATATGGAC GCCCGAGCAA ATGGAGGTAA
GTTGTCCGAA ATATGCCTTG AACAGGCTCT AATGAGCGTG ATGGGACATA TAGTCAATTC
AAAAATGGGG AAATAAGCGT GCCAACATGT ATTGGGAGAG GCATCTCAAA GCGGGGCATA
TACCATCTGA CCAGTGCGTA TTGGGAAGGC AGTTCTCTAT CCAACTAGTC CAGCTCACCT
TGATTAATCT TTCTAGCAAA ATTGAGTCCT TCATTCGGTC AAAATACGAG ACTCGCCGTT
GGGCAATGGA CGGACCTCCT CCACCCGACC CCAGTGTTCT CGAGAATGAA AGCACTGGGG
GTGTCGTCTC TCCCCCACCC CATCAGACAA AATCCCCTGC CCCTATTCCT TCCTCCACTT
CTTCCTCTGC GGCGCCCCCC GTCCCCGCCC ATTTACCCAA GACCCACCCT TTGCTGTCAA
GGAGCATAGC TTCCAGCAAA GCCACCCCTT CCAAGCCTAC ATCTGCCGTC CAAGCGCCTA
TCATTGATCT CTTTGCTGAT GACCCAGCTC CTGCACCTGC GGCTGTCCCT GCTGCCAGCT
CTAGAGCACC TGCACCAATC GCTACTGCAC CTGCCCCTGC TCAGCCCGCC CCTTCCTCAG
CTTCCAATAT CTTTGACCTC GACTTCCGTA CTCCCTCTGC ACCGCCCCTT TCCAACTCCC
CGCCCGCCTC TGGACCTATC TCTAACAAAT CCCAATCAGC CAAAGCGGAC ATCATGTCCC
TCTTCTCGTC TCCTTCCCCT TCTGCCATCC AATCCCAACA ACCCAATTTG ACAGGTGGTT
TCTTTAACGC TACACCAAGT GGCGTCCAAG CTACAAGCCC CTACGCCTCT TGGCAAGGTG
GTATCACCTC TGCCGTGCCT TCGGACGGGA CTCAGTTGGG GATACCAGTG GGTAATAAGT
GGAGTGGACT GCAAATGGAC CAGAACGCCT GGGGCGCTCC CCAGCACGCC CAAGCTACGC
AGAAGACCCA ACCCACTCAG GCGTACGCTC AGCCACAACA ACAACAAAGC GTGAACAACA
TTGTTTCTGA TCCATGGACA CAGGCAAAAA CCTCTATGGC TTCCCCTTCT GACCCATGGG
CTAGCACGTC TAGTGGGGAT GCCGGTATGG GCGGCGGATT CTTTGGGATG AACCAAGCGC
AGCCCAAAAA GGAGAAGGAT GAGAGGGATC CATTTGCTAA TATTTGGGCG TAGGAGGGTC
CCCTAGGGAA GAGATGGATC AGCATGATAG AGCATAGATG CCTGTTGACA TGAGTAAAAG
CAGGAAGTCT TTG
|
|---|
| Protein sequence | MSTRQDKSTT ERHAKILREL VKQPGNKNCA DCKRNDTRWA SWNLGVFLCI RCSGIHRSMG
THISKVKSID LDIWTPEQME SIQKWGNKRA NMYWERHLKA GHIPSDHKIE SFIRSKYETR
RWAMDGPPPP DPSVLENEST GGVVSPPPHQ TKSPAPIPSS TSSSAAPPVP AHLPKTHPLL
SRSIASSKAT PSKPTSAVQA PIIDLFADDP APAPAAVPAA SSRAPAPIAT APAPAQPAPS
SASNIFDLDF RTPSAPPLSN SPPASGPISN KSQSAKADIM SLFSSPSPSA IQSQQPNLTG
GFFNATPSGV QATSPYASWQ GGITSAVPSD GTQLGIPVGN KWSGLQMDQN AWGAPQHAQA
TQKTQPTQAY AQPQQQQSVN NIVSDPWTQA KTSMASPSDP WASTSSGDAG MGGGFFGMNQ
AQPKKEKDER DPFANIWA
|
|---|
| |