| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CNE03920 |
|---|
| Symbol | |
|---|
| ID | 3258007 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_006687 |
|---|
| Strand | + |
|---|
| Start bp | 1112081 |
|---|
| End bp | 1113182 |
|---|
| Gene Length | 1102 bp |
|---|
| Protein Length | 226 aa |
|---|
| Translation table | |
|---|
| GC content | 51% |
|---|
| IMG OID | 638256975 |
|---|
| Product | 60s ribosomal protein l1-a (l10a), putative |
|---|
| Protein accession | XP_571019 |
|---|
| Protein GI | 58267726 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0081] Ribosomal protein L1 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 41 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GCAAGACCCA TCCGGCCTGT TAAAGAACAA CAAAAATGTC CAAGCTCCAG GCATCAAGCG
TGCGAGGGTC TATCAGGACC GTCCTCGACC AGTCCTCCCT CGAGACCCAC AAGGAGGCTG
GTGGTAAGAA GAGGAACTTC GTTGAGACCA TCGAGCTCCA GATTGGTCTC AAGAACTACG
ACCCCCAGAG GGACAAGCGT TTCGTCAGTG TTTTCTCCGG ACTACCTTCT GCAGAAAGCT
AACACTGTCT GTAGTCCGGT ACCGTCAAGC TCCCTCACGT TCCCAGGCCT AGGATGTCTC
TCTGTATCCT TGCCGACGCC ATGGACGTTG ACCGGTTGGT TTAAATGCTT GAAGTTATCG
AAGAATCAAA ATTGACGTCC TACACAGTGC CAAGCAGCTC GACGAGGAGC TCCCCTTCAT
GACCGTTGAG GACTTGAAGA AGCTCAACAA GAACAAGAAG CTCGTCAAGA AGCTCGCTCA
GAAGTACGAC GCTTTCCTTG CCTCTGAGGC TCTCATCAAG CAGATTCCCC GTCTGCTCGG
TCCCGGTCTC TCCAAGGCGG GCAAGTTCCC CACTCCCGTC TCTCACTCTG AGGATCTCGC
CCGAAAGATC AACGACGTCC GATCTACCAT CAAGTTCCAG CTCAAGAAGG TTCTCTGTCT
TGGTGTTGCC ATCGGTCACG TCGACATGAC CGAGGACCAG GTTATGCAGA ACGTCATGCT
TGCCATCAAC TTCTTGATCT CTCTCTTGAA GAAGCAGGTA CGCGTATCTT TATTTTCTCA
AGTGAAGAAC GTCTCTGACA TATCCAACAG TGGCAGAACA TCCAGTCTCT TACCATCAAG
TCCACCATGG GCAAGCCCCA GCGACTCTTC TAAGCAGGTC GTCGTATAAT TCCTCATCAT
GTCTTTTTCT TTGTTGTCAG CGGTTGGGGG GGATATGATA GCACAACAGG AGCTTCGCAC
GCTTATACCC AAGTCTTGTC TGAGCCCTTA ACTGGGTGTC CGGAGGCTGA GGGGAGCCAT
CATTTCTTTT CTGGTTGTTG ATGGCGAGTT GAAGTTGTTG TAGAGAATTA TGCATGGTCT
CTTTACGCTA CATATTATCA TT
|
|---|
| Protein sequence | MSKLQASSVR GSIRTVLDQS SLETHKEAGG KKRNFVETIE LQIGLKNYDP QRDKRFSGTV
KLPHVPRPRM SLCILADAMD VDRAKQLDEE LPFMTVEDLK KLNKNKKLVK KLAQKYDAFL
ASEALIKQIP RLLGPGLSKA GKFPTPVSHS EDLARKINDV RSTIKFQLKK VLCLGVAIGH
VDMTEDQVMQ NVMLAINFLI SLLKKQWQNI QSLTIKSTMG KPQRLF
|
|---|
| |