| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CNE03650 |
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| Symbol | |
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| ID | 3257900 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_006687 |
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| Strand | + |
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| Start bp | 1033833 |
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| End bp | 1039775 |
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| Gene Length | 5943 bp |
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| Protein Length | 1840 aa |
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| Translation table | |
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| GC content | 50% |
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| IMG OID | 638256948 |
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| Product | ubiquitin-protein ligase, putative |
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| Protein accession | XP_570937 |
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| Protein GI | 58267562 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.126402 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCCCTCA ATCCTTTCTC GCGCTCAGCA AACAACCCAT CTCGTAACGA ACGGCGCGAT
CCTCACCGAG GACTCTCTGA CCTACTAAAC AGCGCCCATC TGCAGCACGG CGCACGCTGG
TCAAACAACG TAAAGGCTTC CATATTACGC CAGCTGTGGC AGACAGTATG GCAAGATCCG
CAATGGATAC AATACTTCGT GCCAGAAGGT ACACATGTCC CAGTGTACGA TAATTTATGG
GAGTGGTTAG TTGACACTCC TGATGGACCA TCGAAGCCAT GGACATTGAG CGAGAAGCAA
GCTCAAATTG AAGAAGAGAG AAAATCAGAG GGAAAGAAGC CCATCTGGAC TCGTAGGAAA
GGTCAAATAT GTGGTAAAGT CATGCAACGG CACGACAGGA CGTATACCTG CAAGTACGTG
CTCTACTAAT GAAATGTCCC TTAGCTGACG AATGATACGC AGAACGTGCG CGATAACGCC
ATCAGTGTCG CTCTGTGTTG ACTGCTTCCG AGCTTCTGAC CATCAAGGCC ATGAAGTTCT
GTTCGGCCAA TCGTTCTCGT TTTCGGCTTC TTGTGATTGT GGCGACCCTA CCGCATGGAA
GGACGACTCA CATCTTGGTT GTACACACCA TCCTCGCCTC CCTCCCGGCT CTCCTCCGCC
CTCTTTCCCA GATAAATTCG ACCTTCCAGA CTCTTTGGTC ATCTCTCTCC AGAAAACGAT
TGCCATGTGT ATTGAATTCA TCATTCACAC CATTGAACAC TCCCACCTTC CCAGTGAATA
CGGGCTTTTG CCCAAGACAG AGACGGAAAT GCATTCTTCA GATGGACCGA CAGGAGAGCC
AAAGGACAAG AGAGGAACGG GGCCTTGGGC TGTGGTATTG TGGCAAGATG ATAGGCATGT
GTTAAAAGAG CTGGCCAGGC AAGTTCGGGA TGGCTTAGGC GTCAAATGGG AAGTGGCAGA
ACAGTGGGTA AGAGAGGCCA TCACCGTCGT AAGTACCATT CCTGTTTTTC TATTATTCTT
GTCTGATCGG CTTGTAGGGT CGCAAAATCA TACTAGTTTC ACCTAATCCA GTGATTGCTT
TTCACGCGGC CAATATGCTG CAGCAGATTG ATGCACCAGT GACCTTACGG CCTGCCGCCG
ACGTCTTCAG GGAAGAAATC GTGGCTACCC TCATGGATTG GCTCTATGAC ATCCAAGGCT
CTCTGATTGG AGGTGATGAT CGACTACCGA AACGGCTCAT TTTTAACGCC CTCTTCGAGA
AGCGAATGCT TCCTCCAGGA GGACACGGAA CACCACTAGC GAACGATCTT AGCGATCTGG
CCAACGGAAA GATGCTGGGT GCGACTCAAG TAGTGAAGCG GATGGACTGG TTATTACAGT
TAGATTCAAG ATTGTGGAAA AAAGCCAAAT GGCAGTTGCG GCAGATATAC TGTTCAGTGT
TTTTGAGTGA CGTTGAGGCT CGGAAGGCTT TCGGTGAGTG ATTCATGTAC AGTATCCGCT
ACACACAACT GACGTATTCT AGCGTCATCA TTTGCTTTCA ACTACCCTCG ACTGGCCGAG
CATTTCCTCT TTCAAGATCG CGAATTTGAC GCTAATATAA TTTTTTCTTC CGCCTATCTT
GTATTCACAA ATGGCCCCGC TACCGCCCAT GCTTCCGCAC ACGCCAACCT CCTGACCAAC
GTCGTGCAAG TTGCTCACGC TTGGTATACC GGTCAAGTTG TGACAAACGA AGGCTGTGAC
CGCCTGGTTA TCCCACCAGT GGCTTTTGAT CCCAATGATT CGACCTCTCA AGGACGCTTG
GATCTCGATG CACATGCCTT TTCGGGGAAA AAGGGTTTAG CCATATTGGG CCATCTGAGG
AGTATGTTCA GGCATGAGGA GATGAAGAAG CTTGTAGTCA AGCAAAACCA GCTGTTTGGT
AGGGTACTGG GATTTATCAA CATGTTTGTT GGTATTCAGC CGCAACGTAG AGAAAGAGGA
GGGCATATTG AGTACGAAGT GGAGTGGCTC AAATCTTTCA CTGTCCTTGG TGACCTCGCG
CGAATCTGTC GGGACCTGGG AGAGGTTTTC TCAGTAGCGA GCGCAGACGC TCTTCTGCAG
AATATGTCCC TTGTCGCCAA TCGCATTTTC TGCGACATGT TTTTAATATC CAACACGCTC
GACAAAGATC GATATACACC TCTCACCGAG TATACGATCA ACGATGTTTT GGTACTTGGA
ACAAGCGTTA CCGTCATCAA GCAAGATGTA ACGACTATCG AGGCATTCAG CTTCCACCAT
TACCTAAATC TGTTGTTTGC AGGGATGTTA AAATGCATGA GAACTGGGAT TCCTTGGGAA
AACGGGAAAG TCAATGGGAT GGATTTCAAT CGGATAGTGG AAAAGTTTGT GCTGGGCAGC
AACGATGAAC AAGCCATGGA GAGAATGAAG TTGATGCTTA TTGAGTGGCC TTTACAAAGT
AAGCACCTGA TAAAGCAGAC AGGAAGTGAT CTAACGCAAA ACAGAACATG TGGTTTTCGC
CCAATTACGC GCCAACATGT GGAAAAAAAA CGGCTCGGCC CTCCGACTAC AGCATCACCA
TTACTGCGAC GTCTCTGTCC GCGAGTCTAC CATCGACCAA GAATTCTTCC TTCTCCAGTT
CGGGCTCTGT ATCCTTGACC CATTCACATT CATAGTCGCT CTGATCGATC GCTTCGGCCT
TACGAAAATG TTCCAAGGGA ATGTTGAGAA AGCGCTCCTC TGGTATGGCG AAGACCCAGA
CCCGAGACAA ATAATCAACC TCATGGAGGA TTTACTGCTT TTGATCATTC ATCTTGTGTC
TTATCCGGCC ATCATCAACG GATGGGATAG GAAAACCATA ACAAGGAAAC TGATCATCCA
CCTCTTGGCA GTACAGCCCA TGACTTACTC GGAATTATTC AAGAAGCTCC CTGAACGGTC
CCAAGAGATC AGTTGTACCC CTATTCTAGC TGAAGTCGCC AACTTCCGCC AGCCTACCGA
GACTACATCT GGGCAATACA GCTTAAAAGA TGAGGTATAC GACGAGGTGG ATGTACACTG
GAGGTACTAT ACAAGGAATG ACCAGCGATC AGTAATGGAC AAGCTCGTGG CCCGGGCGAA
GAAAAACAAA CCTTCAAATG AAGAACCCCT GATCCTTCCT CGACCGTTGG AATTTCCGTC
AACTGACAGC CCTTTCTCAG GGGTTAGTCA TTTCCTGCAT ACTCATGTGG TGGCAGATCT
TGTGCACTGG GCTCTTGCGC ATTGTATGCA CATTGCCACG CCAGACAAAT GGGCTGAAAT
AGTCCAACAA GCCTACCCAC AAGAATATAG TAATACCCCT CTCATTCCCT CATGGGACTT
TGTCCTCGAT TACACCCTCC ATCTCGCCAT GATCGCTCTC GGCGTTGCAC CCCAAGAGTT
TGCACAACAA TCTGTCTTCT TGAAAGGCGT GGAGGGCTCA AACAGCACGT TCCAGAATTT
GTGGGTTATG CAATCCGACC CTGCTTTCAA AGCTTTCAAG CCTCGCGTGG ACTATGTACT
CGATACTATT GTCGCCAATT TGCCTCCACA TTACACCGCC GACTACCGAG CCCACAAGGA
AAGCGAAAAC ATGCTGGCTC TCTCCAGTCT CGCCAAGCCC GATCCTAAGG CTGCAGCCGC
TGCTAGGCAA AAAGCCATCA TGGCCGAATT CGCCAAGCAG CAGCAGGACT TTGTGGCAAT
GATGGAAGAT ATGGATGACG AGGATGAGGA CATTCTGGTG GATGAGCAAA AGGAGGAAGA
AGAGTCATAT GGGAACTGTA TCGTCTGCCA GGAAGAGGTT ACAGCTAAAA ACGCTGGTGG
GATGTTGACG CTTCTCCAAC CAAGTCGGCA GTTGCGTGAT GTGGTGAACA CACGAGATTG
GTTTGAAGAA TCTCTGCTTG CTCCGACAAG TATGGATAGG CCCGGAAGAT ACCAAAGGTA
TTCCTATGAC CCTAAGCATC CCGAACCCGT TGGCACACAG GGGTACCCGT GCACTAATCT
CAGATTTGGT ATCCATATGT CAGCATGTGG CCATTACATG CACGACACGT GTATGAACAG
CCATTTCGAA ACCACCAAGA TTAGACATAC TCAGCAGGTT CAGCGGCATC ACCCCGAAAA
TGCTGTGCGG CTCGAGTATA TGTGTCCACT GTGTAAATCT TTGGGCAATG TGCTCATTCC
CGTGGAACCG TCCCATATCG CCAAGAAACC TGCTGTATCA GCGAAAAAGG ATGAGGATAA
GCCCCCAAGT CTATCGGTGA TGATTCGGAG AGTGTCAAGC GAAGGGTTAC TGAGGGTAGC
CGATAGTCAG CGGATATGGG AACACCATGT CGAGACGGGA GAGGTCGTCC CATGGTTCTC
CGACTGCGTA TTCTCGTTAC ACTCTCTGGA TCATAATCAT CGAAGAGGTG CTATGCGGGT
CATTTCAAAG ATGGTTGATA GAATGGGTGG TCTAGTACGG CCATTGTCAG AGCAAAGTCA
GAGGATAAGA GGGAAGAAAA CCCATATGTA TTTGCCAGAC GATATGGTGG CGTACACGGT
ATCTATGGCA GAGATTACTC AGCGAGGACT GAAGACAAAC TCCGCAGAAG CGCTGACGGT
GGCCGAGCAA ATTAATGAGA CTACGCTCAA GTTGGTTGGC AAGCTCATCG GGTTACTGCA
GCTAGAGCTG GATTTGTACT TTGGACCGAC GTTTGACAGG ACGTCTTTAA GAGTGGGTAT
ATTTGCACGA TTTTTGCCAG ATTGGTATAG ATCCAGCACA CTTCCCTCAC CGCTTCTCAT
TCGACAACCT CTAGGGATGG TCATTGAATG TGCAGCCATT GCGCCAGACT TGCTGCAGGC
AGTCATCGTG ATGGCTTACT ATGCCGAGCT TACGAGGTGC ATGCTCGCCC TTTCGCTCTC
CGTCAAGAGA TGCCTTGGTC CTCGAACACG ACCTTCCCCC CGTACTCAGC CTCCTGAGGA
TCCCAGCCTC ACTGATGCTC TTACTGTCTT CTCTGGCTTC AGGCCGGTAA TGCAATCCAT
CCTTCGACAT GCCGGACCAT TTGCCGATAC CGATGGCGTT CTTGCTCTTC TTACCGACGA
TATGCTCTCA AAGCTCCTTT ACTCCTATAC ACTCCCCTTC CTACGTCGAT GCGCCATTAT
CTACTACTCC GTGACAGGGA CATACCCCAT CACTCAGCCA TCTGCCTTAT CCACCTTTAC
CCCCGCCACA AGCGAGTACA ATCGTCTGCT TACTATCCTT GGCATTCCTC GACCGACCGA
GACCCTTGCC AACTCATCTT CCACAGAAAC ACCTATTGTT GCTCGATGGA TCACCCAATG
GGCTCTCCAT GGGCGCGTCA TGCCAGTTTT GGAATTCCCT GGCACTTACG AGTTGGCGAG
ACTACCGGAA AAATGGGAGG AGCTGGTACT GGCATATAGT GACCGAAAAT GCGGAAAATG
CAAGACCAAA CCATCATACC CCGCGATCTG TCTCTTCTGT GGCACAATGG TCTGTTTGGC
TGGAGATTGT TGCGCAGAGG GTGAGCAAGG CGAATGTAAT TTGCATATGA GAGAGTGGGT
GACCAGGAAA TTTAACGTCA TGACACTTGA GCTGACCACT AAATAGATGT GGAGCTGTGG
TGGGCATGTT CGCGGACATC AAGCGATGGA ACTTGCTGTA TCTTTATGCG GGGTCGGGCA
GCTTTGGGCC AATGCCGTAT TTAGATACTC ACGGGGAACT TGACATATCT ATGAGGTGGG
TAGAAGAAAT CTTTGAAGCA CCTTTACTGA TCATTCGTCC GTAGACGAGG TCACAGGCAG
ATCATGCACG TTGGGCGTAT GGATGAGCTG AGAAGGGGAA CGTGGTTGAT GCACAACATC
CCACACATCA CCGCACGAAG ATTAGAGCTG ACAATAGATC ACGGAGGTTG GGGCTGCTTA
TAA
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| Protein sequence | MPLNPFSRSA NNPSRNERRD PHRGLSDLLN SAHLQHGARW SNNVKASILR QLWQTVWQDP
QWIQYFVPEG THVPVYDNLW EWLVDTPDGP SKPWTLSEKQ AQIEEERKSE GKKPIWTRRK
GQICGKVMQR HDRTYTCKTC AITPSVSLCV DCFRASDHQG HEVLFGQSFS FSASCDCGDP
TAWKDDSHLG CTHHPRLPPG SPPPSFPDKF DLPDSLVISL QKTIAMCIEF IIHTIEHSHL
PSEYGLLPKT ETEMHSSDGP TGEPKDKRGT GPWAVVLWQD DRHVLKELAR QVRDGLGVKW
EVAEQWVREA ITVGRKIILV SPNPVIAFHA ANMLQQIDAP VTLRPAADVF REEIVATLMD
WLYDIQGSLI GGDDRLPKRL IFNALFEKRM LPPGGHGTPL ANDLSDLANG KMLGATQVVK
RMDWLLQLDS RLWKKAKWQL RQIYCSVFLS DVEARKAFAS SFAFNYPRLA EHFLFQDREF
DANIIFSSAY LVFTNGPATA HASAHANLLT NVVQVAHAWY TGQVVTNEGC DRLVIPPVAF
DPNDSTSQGR LDLDAHAFSG KKGLAILGHL RSMFRHEEMK KLVVKQNQLF GRVLGFINMF
VGIQPQRRER GGHIEYEVEW LKSFTVLGDL ARICRDLGEV FSVASADALL QNMSLVANRI
FCDMFLISNT LDKDRYTPLT EYTINDVLVL GTSVTVIKQD VTTIEAFSFH HYLNLLFAGM
LKCMRTGIPW ENGKVNGMDF NRIVEKFVLG SNDEQAMERM KLMLIEWPLQ KHVVFAQLRA
NMWKKNGSAL RLQHHHYCDV SVRESTIDQE FFLLQFGLCI LDPFTFIVAL IDRFGLTKMF
QGNVEKALLW YGEDPDPRQI INLMEDLLLL IIHLVSYPAI INGWDRKTIT RKLIIHLLAV
QPMTYSELFK KLPERSQEIS CTPILAEVAN FRQPTETTSG QYSLKDEVYD EVDVHWRYYT
RNDQRSVMDK LVARAKKNKP SNEEPLILPR PLEFPSTDSP FSGVSHFLHT HVVADLVHWA
LAHCMHIATP DKWAEIVQQA YPQEYSNTPL IPSWDFVLDY TLHLAMIALG VAPQEFAQQS
VFLKGVEGSN STFQNLWVMQ SDPAFKAFKP RVDYVLDTIV ANLPPHYTAD YRAHKESENM
LALSSLAKPD PKAAAAARQK AIMAEFAKQQ QDFVAMMEDM DDEDEDILVD EQKEEEESYG
NCIVCQEEVT AKNAGGMLTL LQPSRQLRDV VNTRDWFEES LLAPTSMDRP GRYQRYSYDP
KHPEPVGTQG YPCTNLRFGI HMSACGHYMH DTCMNSHFET TKIRHTQQVQ RHHPENAVRL
EYMCPLCKSL GNVLIPVEPS HIAKKPAVSA KKDEDKPPSL SVMIRRVSSE GLLRVADSQR
IWEHHVETGE VVPWFSDCVF SLHSLDHNHR RGAMRVISKM VDRMGGLVRP LSEQSQRIRG
KKTHMYLPDD MVAYTVSMAE ITQRGLKTNS AEALTVAEQI NETTLKLVGK LIGLLQLELD
LYFGPTFDRT SLRAVIVMAY YAELTRCMLA LSLSVKRCLG PRTRPSPRTQ PPEDPSLTDA
LTVFSGFRPV MQSILRHAGP FADTDGVLAL LTDDMLSKLL YSYTLPFLRR CAIIYYSVTG
TYPITQPSAL STFTPATSEY NRLLTILGIP RPTETLANSS STETPIVARW ITQWALHGRV
MPVLEFPGTY ELARLPEKWE ELVLAYSDRK CGKCKTKPSY PAICLFCGTM VCLAGDCCAE
GEQGECNLHM RECGAVVGMF ADIKRWNLLY LYAGSGSFGP MPYLDTHGEL DISMRRGHRQ
IMHVGRMDEL RRGTWLMHNI PHITARRLEL TIDHGGWGCL
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