Gene CNE03270 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCNE03270 
Symbol 
ID3257511 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameCryptococcus neoformans var. neoformans JEC21 
KingdomEukaryota 
Replicon accessionNC_006687 
Strand
Start bp934225 
End bp935542 
Gene Length1318 bp 
Protein Length297 aa 
Translation table 
GC content51% 
IMG OID638256910 
Productubiquitin conjugating enzyme, putative 
Protein accessionXP_570886 
Protein GI58267460 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG5078] Ubiquitin-protein ligase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CAATCTTGTC CAGCCATGCC CAAACTCAAC CTTCGCTCCA CTGCCGTGAA GCGCATCATG 
CAAGAGGCTG CAGAACTCGC AGCCGCCGAC GTCGACGACG ACGGCTTCGT CGCCGCCCCC
TTGGAGGTAC GCCCCCACTT CGCACGCATG ACTTATCGAA TATGCGCCAT TTCAAGGATC
GTAGGGCTGA CCAATATGCC AGGATGATAT ATTCGAATGG CATTGTACGA TGCGTGGAGT
GCCGGACAGT GAATATGACG GTGGTTTGTC CTTCTATCAC TCTTTGCATA ATTCTCCCGA
CTAATCTGAT CACTTTGACT CCGCAGGTCT CTATCATTTT CGCATAGTCC TTCCTCCCTC
TTATCCCATG AGTGCACCCG ATATTATTTT ATTGACTCCC AACGGGCGCT TTGAGCTTGG
CAAAAAGGTG GGTCATGGCA CCAGACAGTG GCGGGTCAAC GGACAAAGGG GATAAAGGCA
GTGCCCGCTG CGCCTGCGCA GTAGTTGCTG ACGCGGGAAA ATAGATTTGT ATCGATGGCC
TTACCAGCTT TCACGCTGGT TCATGGCAAC CAGCATGGGG TGTTCGTACA GGTAGGCCAC
ATGGTTATCA TCTGTTCATA CGGGCTTGTT ATTTAACCTT CCTTCCAGCC ATTGTAGGTC
TTCGGTCGTT TTGGATGCAA TCTGGCGAGG CTCTTTCTGC TATCGGTGCT CTCGACCATT
CGAAAGAGGA AAGGAAGCGG CTTGCAAGGC TTTCAGCAGA ATGGAAATGT CCTACTTGTG
GTATTAAAAA CGAGGAGATC ATGCCAAGGT ATCCGGCTGC CGTTGATGAG AAAGAGGGAG
GGAAGGGAGG GAATGAAGAT GTCAAGCAGT ATATGGACAG TGGAGACACA GTGGATTACG
CAGCTGCTTG TGCTCTTAAA GCTGAGCACA TAGAGGAGGC AGGAGATAGA GGGCTCGACT
CTGAACATTT AGAGTCCCGT CCTACTGAAC CGGAACCACA AGCGGAAGCC ACAGATTTAC
GGGCGTCAGC CTCTCCAGAG GTTATCTCCA CGTCAGCTGT ACAAACTTCA CCCTCGTCCA
CACAAATCAC TCTTGAACCC TGTCGCACTG TCCCGCTATG GCTCGATCAC CTCATTGGGG
GATTCTGTAT CGCCCTTGGG CTAGCCATCT GCAAGCGAGT CGGGACGTAC ATCTTGAGCT
GAGCTGTTGA ATCGGCGGCG CGTTTCCGTA TCTATTGATC TTCCTTATTG TATCTATCAC
ACCTTGCCAC ACTCTAGATG TAGACATATT GTCATGTATT GCACCCTTTT TTGTTTGC
 
Protein sequence
MPKLNLRSTA VKRIMQEAAE LAAADVDDDG FVAAPLEDDI FEWHCTMRGV PDSEYDGGLY 
HFRIVLPPSY PMSAPDIILL TPNGRFELGK KICIDGLTSF HAGSWQPAWG VRTAIVGLRS
FWMQSGEALS AIGALDHSKE ERKRLARLSA EWKCPTCGIK NEEIMPRYPA AVDEKEGGKG
GNEDVKQYMD SGDTVDYAAA CALKAEHIEE AGDRGLDSEH LESRPTEPEP QAEATDLRAS
ASPEVISTSA VQTSPSSTQI TLEPCRTVPL WLDHLIGGFC IALGLAICKR VGTYILS