Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CNE03030 |
Symbol | |
ID | 3257710 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Cryptococcus neoformans var. neoformans JEC21 |
Kingdom | Eukaryota |
Replicon accession | NC_006687 |
Strand | + |
Start bp | 860313 |
End bp | 861130 |
Gene Length | 818 bp |
Protein Length | 175 aa |
Translation table | |
GC content | 45% |
IMG OID | 638256886 |
Product | ubiquitin conjugating enzyme, putative |
Protein accession | XP_570851 |
Protein GI | 58267390 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG5078] Ubiquitin-protein ligase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.0295747 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTTGGCA ACAACAACTC TCGATCACAA TCTTCCACGG CTACCCGAAG GTATGGTATC GGTAGAGTTT TAGACAGACA AAAAAGCGTC CCGCTGATCT TGCTTCCTCG AAGACTGATG AAGGAGTATC GTGACTTAAC CGCCGATCCT CTACAAGATA CAATCACCGC CGGTCCAGTC TCGGAAGATA ACATGCTAGA ATGGGAAGCT TTGATCCAAG GTCCAGAGGG CACTCCTTAT GTCAGTAGTA TACTCAGGCA TCAAAAGACC GTCATACTAA TTAGCTCTCG CGATACAGGA AGGGGGAGTC TTTGCGGCAA GACTTGTCTT CGTCAGTGTT CCTTTTTCCT TTTGATTTTT CCATCTACAT TCGGATTTCA GCGTCTAACA TGTAAATGCA ATAGCCATCT GATTATCCCC TTAACCCTTT CACTATGACT TTTGATCCAC CCCTCTTGCA TCCCAATAGT CAGTTAGCTT CTCTATAACA CTTCAACACG AGAGCTTATG CGATACAGTC TACCCCAATG GCCTCGTTTG TATTTCAATC CTCCATCCTC CGGGAGACGA TCCTATGCAG TATGAGTCTG CTTCCGAACG GTGGTCTCCC GTACAAGGAG TGAGAAGCGT ACTTCTCAGT GTCCTGAGTA TGCTAGCTGA GCCTAACATT GAAAGTGGTG CAGACATAGA GGTATGTGGT TGCAATGGTA ATCATGGTCA AAAACTCATG AAAGCAGTGC TGCAAACTTT ACCGGGACAA TAAGCCAGAA TTTGAAAGAC GAGTGCGAGA GCAAGTAAAG AATCTTCTGG GTATATAG
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Protein sequence | MFGNNNSRSQ SSTATRRLMK EYRDLTADPL QDTITAGPVS EDNMLEWEAL IQGPEGTPYE GGVFAARLVF PSDYPLNPFT MTFDPPLLHP NIYPNGLVCI SILHPPGDDP MQYESASERW SPVQGVRSVL LSVLSMLAEP NIESGADIEC CKLYRDNKPE FERRVREQVK NLLGI
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