Gene CNE02980 details

Gene Information

• Locus tag: CNE02980
• ID: 3257952
• Is gene spliced: No
• Is pseudo gene: Yes
• Organism name: Cryptococcus neoformans var. neoformans JEC21
• Kingdom: Eukaryota
• Replicon accession: NC_006687
• Strand: +
• Start bp: 805360
• End bp: 810228
• Gene Length: 4869 bp
• GC content: 48%

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.0307333
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TCCAACCTGG ATCTGGAGAG ATCAGTAGGG ATCTGGAGGC ATGGGAATTG TTAGTGGAGG 
CATGGGAATT GCTGGTGGAG GCATGGGAAT TGTTGGTGGT GGCATGGGAA GAAGGGGAGA 
TTAGATTACA TAAGCCAGGA CACTTACAAT ATCGAAACAA ATAAAGACAA AGGATTGTAG 
AATAGTTTCC ATGCAACTTA GACATCTCTG GCAATCGACA CCGCGTGCTC AAGCTCTCTC 
TAGACAACTC TACATCTGAC AGGTTATGAG CCTTGCTGCT TAACAGCACT AGACTCTAGC 
AAACACATCA GTCAACCAAC ACAAATCCTG CAGGTCACTA TTGCATTAGT ACCACAGGTA 
CTGCTTGATA CCAACAAGTG GTGAGAAAAT CTGGTGCCCC CCAGTGGCAA GTCACTGCGC 
CTAGTGCACA AGCAAACTTG CCTTGCGTTA GCTAAGTACA ACCTGGACGT CTCTTTATCT 
CTATTACAAA GAACACGACT CTCACTTCTC CTATAGAGCT CTGAAAGCTA CACACACATC 
ATGTCCAACA ATACAGACAA CAACACATCC TACCAGGGGG TCATCTTAAC TGGCCCCCAG 
AACTATGCTG AATGGGAGCT ATCTATCAAA ACATCTCTCA TCCTCAAGGA CCTGGAGATT 
GGTACTCCAG TCAGCCTTGA CAGCATGTCC TCCAAAGAGG ACAAGGAGAA GTACAAGAGG 
TCCAGGCAAG CTTTTGCCCT TCTTATCAAA TCACTCTCAC CAGAAGTCCA GGCATCCCTC 
CCTGCCAACA TACGATCTGT AGAGACAGCA GACAGCTCAG CACTCTGGGA GGAGCTCAAA 
TCCCAGTACT CAGCAGCAGT GGGCGCAAGA CAGGCTCAAC TTTTGCAACA AATGTGGATA 
TCCCCTGTCA TTGAAGGAGA AGACCCAAAC AAGCGCATGG CAGAAATCAG ATCAGCCCAT 
GCTCAGATCA ACAGCAGTGG TGAGAACCTC TCGGACCGAA TGCTTGCCTA TGCCATGACC 
CTAGCTCTTC CAGAATCATT CACCACTGTC AAGCAAACTC TCTGGCTCAG GGAACCACTT 
ACCTCTTCGG CTGTGCAGGC AGCAGTCCAA GCTGAGTGGA CAAGGAGGTC CAGTGAGGAG 
GTAGCAATGG CTAACAGGGT GCAGGAGAGT CACACCCAAG GCAACAAAAG CAATAGAAGG 
GCCAAGCCAA GGGAATGGAC TGAGAAATGG TGCAGTATCC ATAAAGTGCC TACTCACAAT 
ACCAGAGACT GCTCTCTCAG GAAGTTCAGC AATAACCACA GTCAGTCAGG TCAGGCTAGG 
GTGGGTACCG GTGAGTCTGC TAAGGCAGAG GAGCTGGCAT CTACCTTCCA TGCTGTAGCA 
GCAACTACAA CCTGTTTCCA TGACAACTCC TTCATAGTGG ACTCAGGGGC TTCACACCAC 
ATGGTTAGCA ACAAAGGCTT ACTTCACAAC TATGGGCCAG CAACAATTGT CAGAAGTGTA 
AAGATTGGTA ATGGCACTAT CCTTCCAGTC GCTGGCCAGG GAACTATGAC CATTGGAGCT 
ACCACTCTTC AGCAAGTCCT CCATGTTCCC CAACTCCAGT GCAACCTTCT CGCTGTTAAC 
AAGGTCCCAT CTGGTTTCCA CTGGGCATTC AGCAGCAGTA AAGGTGAACT TTTTGATCAA 
TCTAACCAGG TCTGCTTGTC TGCCCCATTC AAAGATGGTG CCTACTCCCT GCAGGTAGAT 
CCATCTGGCC ATGCCTATCC TGTTCAACTG GCTGATACTC TCTCAGAATG GCATCATAAG 
CTAGGGCATT TGGGGATTGA GAAAGTGGTT AGGCTTGCAA AAGAAGGGAG ACTTGGTCAG 
AATAATCAAT TGAAGAATGC AAATGCTGGT GATACCAAAG ATTTCTATTG TGAAGCATGT 
ATTAAGGGGA AAACTGGGCG ACTTCCTTCA CCACCTGAAC CCAACATCAG AGCTTCCAGG 
CCACTTGAAC TATTGCATAT CGACATCTGG GGACCAGCAC CAGTCGCTTC CAAGGGAGGT 
ATGCGATACT TCCTGACTGT CTATGATGAT TACAGCCACC GGATTTCCCT CACCTTGATG 
AGAATGAAGT CTGAGACACT GCAGAGTTTC AAAAACTTTG TCAATCATGC TGAAACTCAG 
ACTGGTCATA AGGTTCAATC TATTCGGTCT GATAGGGGCG GAGAATTTAC ATCAGCAGCA 
TTCCAGAGGT ATATCAGGGA GAAAGGGATT GAGCATGTCA TGGTGCCACC TGATGCTCAT 
GCACAGAATG GGAGAGTGGA GAGGGCGCAT CTTACTATCC TCAATGGTGT GAGAACTTTG 
CTTGTGGAGA CTGGACTGCC AGCTAGCTTC TGGGGTGAGG CTGCTAAATA CATTGCCTTC 
TCTCGCAACT GCTCCTTTGA CTCCAACAAT GGAATTCCCT TTGAACGCTG GTATGGCAAG 
AAACTGTTGT TCACTCAACT TCAAGCATTT GGAGAAAAGA TTTTCTTTAG GGATTATACC 
AACACCAACA AATTGAAGCC TCGCTATCGA CAAGGAAGGT TTATGGGGTA TGCCAGTGAT 
AGCAGCACTT CCAGTTATCG AATTCTGGAT GATGAAGACA TGAAGATCAA GGTGTCAAGG 
GATACCATTT TGCCAAAGAA GCTGGACATT CCTCATTCCA AGATGCCAGC AAGGGGGAGT 
ATTCTTAGGC TGGAGGAGTG GGATGACAAC AAGAACAGAG ACACATCAAC ACATGCCCAA 
GATCCATTGG CAGAAATACC TGACAGAATC ATCCCTGCCC CCATGGAAGT GAATCCTCAG 
GATGAAGTAA GACCTAGAGC AGTTCCAGCT GAGCATCAAT CACCCATGGA GCTTCTTCGT 
AGGCTGGCAA GGTATGACAC TGGAATACAG CAACAACCTG AGGCATCACC ATCATCCAAT 
GCATCAGAAG AGACAAACAG TGATGTTTCA TCCATTGATC CTCTTGCCCT GACTGACAAT 
CCAGAGACCT GGGGTACTAT CGCAACAGCT CTGAATGCTA TGGCAATCAA CACACCCAAT 
ACCTACAGAG AAGCTATTCA GTCAGGCGAG GGGGAGCAGT GGCATCAGGC TATGATGGAA 
GAATTGGAAA AGATGGAGAA GTATAATGTG TGGAAGGTGG TGGATAGGGC ACCAGGACAG 
AGGGTCCTGA AGGCAAGATG GGTTTATACC AGGAAGATTG ATGGGACAAC AGGGAAACCA 
GCAGCATACA AGGCAAGATG GGTTGCCAAA GGATTTTCTC AAAAGGCTGG AATTGATTAC 
AATGAGGTCT TCTCTGCTGT TGCCCACAAA GACTCGATTA GGGTATTCCT CTCTCTGGTC 
AACCATCTTG ACATGGAATG TGACCAGGTG GACATCAAGG CAGCCTTTCT CAATGGCGAT 
CTCGAAGAAA CCATCTATCT TGAAGCACCA GAAGGAAGCG ACATCCCAGC AAACAAGATC 
CTACTCTTGA ACAAGTCACT CTATGGGTTG CGACAGTCAC CAAGATGTTT CAACAAAGCA 
CTTGATCAGT GGTTAAAGTC TCAAGGGCTG AAGCCAACCA GAGCTGACCC CTGCTTCTAT 
GTTCGACGTT GTGAGGGGGA ATTGCTCATG CTCTCTGTCC ATGTGGATGA TCAGCTCATT 
GCCTGCAATT CAAGAAAGAC ATTGGACAAA TTCAAGCAGG CACTTAACAG CAAATTTGAG 
TGCTCTGACT CTGGGCCTGC TGGCTACTTC CTGGGCATCA ATATATACCG GGACAGGCCA 
CAGAAGAAAC TCTATCTCTC CCAGGAGCAT TATATGGAGT CCCTGCTTGA CCGCTTTGAC 
ATGTCCAATT GCAATCCAGC AAAGACGCCT CTTCCTTCAG GCTTCAAACC GATTCCAGCA 
ACAGATCAAG AGCATGAGCT AGCACAACAT CGACCATATC CAAAGCTAGT GGGCTCTATT 
CTCTATGCAG CAACAGTGAC ACGGCCAGAT CTAGCTCATG CAGCAAGTGT TCTGTCAAGA 
TTCATCAGCA AATGGAATGA GTCCCATTGG CTTGCAGCGA AACATTGTCT GAGGTATATC 
AGAGGCACTT CAGATCTTTC ATTGACTTTT GATGCCCACT CAAGCAAGCG AGTTGCACTG 
GGATATGTTG ATGCAGATTG GGGAGGAGAC CTTGACACAA GGAGGTCCAC CACTGGTTAT 
GTTTTCAAGA TATATGGAGG TGTAGTTGGC TGGAAGTCAA AGAGGCAACC TACTGTGGCT 
CTCTCAACCA CAGAGGCCGA ATACATGGCC TCCACTGATG CAGCAAAGCA GGCTATTTGG 
CTAAGGCTGC TCTTGGATGA TATAGGACTT GGCCTGGGTG ATCAGCCACT CCAGCTGCTC 
AATGACAATG CTGGGGCCAT TGCCTTGTCA AAGAATCCAG TGAACCATGA AAAGTCTAAA 
CACATTGATA TGAGGCACCA TTTCATTCGA GAGAAGGTTG AGGATAAGGC TATCTCACTT 
GCCCATGTCC CATCAGTGGA AAACATTGCT GATCTTCTGA CAAAGAGCCT TCCAGCTGAA 
GCTTTTGTCA AGTTGTGCCA TCTCCTTGGA ATGCAGAGGT TGGATCAAGG GGGAGTGTCA 
GAATGAATGA TCCGACCTGG ATCTGGAGAG ATCAGTAGGG ATCTGGAGGC ATGGGAATTG 
TTAGTGGAGG CATGGGAATT GCTGGTGGAG GCATGGGAAT TGTTGGTGGT GGCATGGGAA 
GAAGGGGAGA TTAGATTACA TAAGCCAGAA CACTTACAAT ATCGAAACAA ATAAAGACAA 
AGGATTGTAG AATAGTTTCC ATGCAACTTA GACATCTCTG GCAATCGACA CCGCGTGCTC 
AAGCTCTCT 

 

Protein sequence