Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CNE02870 |
Symbol | |
ID | 3257708 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Cryptococcus neoformans var. neoformans JEC21 |
Kingdom | Eukaryota |
Replicon accession | NC_006687 |
Strand | + |
Start bp | 762225 |
End bp | 764201 |
Gene Length | 1977 bp |
Protein Length | 496 aa |
Translation table | |
GC content | 46% |
IMG OID | 638256878 |
Product | conserved hypothetical protein |
Protein accession | XP_571209 |
Protein GI | 58268106 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0042] tRNA-dihydrouridine synthase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | AAAAATAAAA AAGAACCCTT CAACACTGGT TTGACTATTG AGTCTAGCTG TGATTTCCAG CACAGCAGAT ACTGTCATTC ACCACTTTGT TCCGCTTGAT CGCACGCGGA TGAGGAAATT ATTCAGATCA ATTCGCCTAT TTCCTAGACC ATACTTGCAG CCTTCCGGTT CTGTTTTTCC CATATCTTCA ATGAAAATGG CGCCTGGAAC AACCCGTGGT GCCTCACCAG TCATAGACTC TGAGCATCAG AGCAAACGTC CCAGATTGAA AGCAGAGGAC ACTCAAATAC CGAATCCCTC GGGCATTGAG GTCCAAGGCT CGTCCAGCGA CTGTAACCAT TCTATCATGT CAGAAGATGA TTTGATCGAA GAGCAAATGC GCCTTCCTAT AGAATACGTC AGGTCATATG ATAATGAAAT CAATTATAAG AACAAACTTG TTTTGGCTCC TATGGTCAGA ACTGGAAGCT GTGAGTATAC ACACCTTTTG AAATTGTCAT CAGTGTTAAT GAATTATTTT TAAGTGCCGA TGGTTGGTAT TATTCTTCGC TAGGCGTCGG CAGACACTAA GCGCTTCATT GATTAGCGCC TTCTATCGTT GTATTACGGA GCTGGTTTGG TATGGTCACC AGAAGTAGTG GATAGGGCCA TCATTGGGGC CGAACGAAGT GTAGACCGTG GGTTCTGTCG TTCTTCTTAT GTTTTGGGAC CCCATTAATG GATGTGCTAT AGCTGTAACG GGCGTTATCA CTTACCATAA AGGTCAAGGC CCAATTTTCT CTACGCATCC AGCAGAAAAG CCTTTTCGTA AGTGTTTCAA GCCTTCTGGC ATCGGCTGGC CTAAGCTAAA TGGTGTATTT AGTCATTTTT CAAATCGGTT CTTCTAACCC CGAGCTTGCA GTAAAGGCCG CGCAGACTGT GCAGCAGGAT GTCGCTGGAA TGTGAGACGA TATCACGTTC CGTGATGCTC GCTGTTGACA TTGCTAACGT ACGTCAGCGA CTTGAACTGT GGGTGCCCCA AACCTTTTTC GTGAGTAACT TTCCATGCAG TCTATTCAAT TAGTTAACTT TTGCTCAGAA CGCATGCGGG AATGGGAGCG GCTCTTTTGT CCACGCCAGA GCTTCTTCTC GATATACTGC GCGCCCTTCT CGACAGCATC CCTCTTCCAA TTTCATGTAA AATTCGGCTT CTTCCTACTC AGCCCTCGAC TCTTTACCTT GCATCTCGTA TCCTTCGTAC AGGAGTCCGT AATTTAACTG TCCATTGTCG GACCCGTCAA ATGCGGCCTG GGGAGCGTGC TCTTTGGGAG CGACTAAGCA GCATCGTCGA ACTGGGGAAA AGAAGAGGTA TATCTGTGAT TTGTAACGGT GATGGGGAAG GTTGGTCTAA TTGGGACAGG ATCAGAAATG AAACTGGTAT GTGTGCATCA TGTGCCTATT CCACGTTTAG TCAGCAATCT CTTTCTAAAG AACTAATTGT CTACAGGCGC CGACTCGGTG ATGCTCGCGA GGTCCGCTGA ACGAAACCCC TCTGTATTTC TTCCTTCAGG TCCCTTGAAC ACAGTTACCG ACATTATTCC GAAACTGCTC GCTCTTAGTG ATTACCTTAA AAACCCTTGG GGAAACACCA AATTTCTCCT CATGCAATTC AAACCATCAC CACCTCCTTT ATCCAGTATG TCAAAGGCTG AGAGGAAGCG AATTGCAGAT ATCTTTTCCC AGAGCAAGAG CACTCAAGAG GCCGCTGTCG GACTAGGTAT ATCTTTAGTC GATGGAGACC GATTGTTCAG AGAGATACAA AGAAAGATCA ATGTGGACAC CAATCGCAAC ATTTGGCAGG CGAGAACTGA AATGAAGCTA AATAATGCAG GCGATGTAGA AGGAAAGGAG GCGATAGAGG AGGAAGCAAT AATAGATGGT TTTGAAGTCG GCGTTGGTCC TGCACAAGAA CAAAAAATGA CAGCATGCCG TAGTTAA
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Protein sequence | MRKLFRSIRL FPRPYLQPSG SVFPISSMKM APGTTRGASP VIDSEHQSKR PRLKAEDTQI PNPSGIEVQG SSSDCNHSIM SEDDLIEEQM RLPIEYVRSY DNEINYKNKL VLAPMVRTGS LPMRLLSLYY GAGLVWSPEV VDRAIIGAER SVDPVTGVIT YHKGQGPIFS THPAEKPFLI FQIGSSNPEL AVKAAQTVQQ DVAGIDLNCG CPKPFSTHAG MGAALLSTPE LLLDILRALL DSIPLPISCK IRLLPTQPST LYLASRILRT GVRNLTVHCR TRQMRPGERA LWERLSSIVE LGKRRGISVI CNGDGEGWSN WDRIRNETGM CASCADSVML ARSAERNPSV FLPSGPLNTV TDIIPKLLAL SDYLKNPWGN TKFLLMQFKP SPPPLSSMSK AERKRIADIF SQSKSTQEAA VGLGISLVDG DRLFREIQRK INVDTNRNIW QARTEMKLNN AGDVEGKEAI EEEAIIDGFE VGVGPAQEQK MTACRS
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